RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
PDE8A-212ENST00000560333 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
PDE8A-212ENST00000560333 NESP48681 1621 aa19.82■□□□□ 0.76
PDE8A-212ENST00000560333 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
PDE8A-212ENST00000560333 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDE8A-212ENST00000560333 CLCN6P51797 869 aa19.74■□□□□ 0.75
PDE8A-212ENST00000560333 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
PDE8A-212ENST00000560333 MNX1P50219 401 aaPredicted RBP19.71■□□□□ 0.75
PDE8A-212ENST00000560333 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
PDE8A-212ENST00000560333 ZNF579Q8NAF0 562 aaKnown RBP19.67■□□□□ 0.74
PDE8A-212ENST00000560333 PAK3O75914 559 aaPredicted RBP19.65■□□□□ 0.74
PDE8A-212ENST00000560333 FKBP8Q14318 412 aa19.65■□□□□ 0.74
PDE8A-212ENST00000560333 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
PDE8A-212ENST00000560333 MIER1Q8N108 512 aa19.56■□□□□ 0.72
PDE8A-212ENST00000560333 PLEKHG5O94827 1062 aa19.55■□□□□ 0.72
PDE8A-212ENST00000560333 BAZ1AQ9NRL2 1556 aaPredicted RBP19.55■□□□□ 0.72
PDE8A-212ENST00000560333 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
PDE8A-212ENST00000560333 DCBLD2Q96PD2 775 aa19.46■□□□□ 0.71
PDE8A-212ENST00000560333 POTEIP0CG38 1075 aa19.45■□□□□ 0.7
PDE8A-212ENST00000560333 PHF12Q96QT6 1004 aa19.45■□□□□ 0.7
PDE8A-212ENST00000560333 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
PDE8A-212ENST00000560333 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
PDE8A-212ENST00000560333 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
PDE8A-212ENST00000560333 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
PDE8A-212ENST00000560333 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
PDE8A-212ENST00000560333 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
PDE8A-212ENST00000560333 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
PDE8A-212ENST00000560333 GALR2O43603 387 aaPredicted RBP19.39■□□□□ 0.69
PDE8A-212ENST00000560333 TSPYL2Q9H2G4 693 aaPredicted RBP19.38■□□□□ 0.69
PDE8A-212ENST00000560333 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
PDE8A-212ENST00000560333 LHX8Q68G74 356 aa19.3■□□□□ 0.68
PDE8A-212ENST00000560333 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
PDE8A-212ENST00000560333 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
PDE8A-212ENST00000560333 BAZ1BQ9UIG0 1483 aaKnown RBP19.25■□□□□ 0.67
PDE8A-212ENST00000560333 WDR62O43379 1518 aa19.25■□□□□ 0.67
PDE8A-212ENST00000560333 FBXO3Q9UK99 471 aa19.24■□□□□ 0.67
PDE8A-212ENST00000560333 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
PDE8A-212ENST00000560333 RASEFQ8IZ41 740 aa19.21■□□□□ 0.67
PDE8A-212ENST00000560333 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
PDE8A-212ENST00000560333 MS4A3Q96HJ5 214 aa19.19■□□□□ 0.66
PDE8A-212ENST00000560333 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
PDE8A-212ENST00000560333 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
PDE8A-212ENST00000560333 KIF12Q96FN5 646 aa19.12■□□□□ 0.65
PDE8A-212ENST00000560333 NUBP1P53384 320 aa19.09■□□□□ 0.65
PDE8A-212ENST00000560333 MAP3K13O43283 966 aa19.02■□□□□ 0.64
PDE8A-212ENST00000560333 ASTLQ6HA08 431 aaPredicted RBP19.02■□□□□ 0.64
PDE8A-212ENST00000560333 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
PDE8A-212ENST00000560333 ATMINO43313 823 aaPredicted RBP19■□□□□ 0.63
PDE8A-212ENST00000560333 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
PDE8A-212ENST00000560333 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
PDE8A-212ENST00000560333 FAM212AQ96EL1 285 aa18.99■□□□□ 0.63
PDE8A-212ENST00000560333 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
PDE8A-212ENST00000560333 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
PDE8A-212ENST00000560333 VASPP50552 380 aaPredicted RBP18.95■□□□□ 0.62
PDE8A-212ENST00000560333 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
PDE8A-212ENST00000560333 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
PDE8A-212ENST00000560333 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
PDE8A-212ENST00000560333 SLC39A7Q92504 469 aa18.89■□□□□ 0.61
PDE8A-212ENST00000560333 C7P10643 843 aa18.88■□□□□ 0.61
PDE8A-212ENST00000560333 ATN1P54259 1190 aaPredicted RBP18.87■□□□□ 0.61
PDE8A-212ENST00000560333 DCAF8Q5TAQ9 597 aa18.87■□□□□ 0.61
PDE8A-212ENST00000560333 TRPC6Q9Y210 931 aa18.87■□□□□ 0.61
PDE8A-212ENST00000560333 PCDHB13Q9Y5F0 798 aa18.87■□□□□ 0.61
PDE8A-212ENST00000560333 BMP2KQ9NSY1 1161 aaPredicted RBP18.86■□□□□ 0.61
PDE8A-212ENST00000560333 METRNQ9UJH8 293 aa18.86■□□□□ 0.61
PDE8A-212ENST00000560333 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
PDE8A-212ENST00000560333 TIE1P35590 1138 aa18.85■□□□□ 0.61
PDE8A-212ENST00000560333 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
PDE8A-212ENST00000560333 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
PDE8A-212ENST00000560333 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
PDE8A-212ENST00000560333 IFNL1Q8IU54 200 aa18.75■□□□□ 0.59
PDE8A-212ENST00000560333 TTLL13PA6NNM8 815 aa18.74■□□□□ 0.59
PDE8A-212ENST00000560333 OTUD5Q96G74 571 aa18.73■□□□□ 0.59
PDE8A-212ENST00000560333 PYGBP11216 843 aa18.7■□□□□ 0.58
PDE8A-212ENST00000560333 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
PDE8A-212ENST00000560333 GSE1Q14687 1217 aa18.69■□□□□ 0.58
PDE8A-212ENST00000560333 CHD1O14646 1710 aa18.69■□□□□ 0.58
PDE8A-212ENST00000560333 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
PDE8A-212ENST00000560333 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
PDE8A-212ENST00000560333 IFNLR1Q8IU57 520 aaPredicted RBP18.62■□□□□ 0.57
PDE8A-212ENST00000560333 TMEM106CQ9BVX2 250 aa18.61■□□□□ 0.57
PDE8A-212ENST00000560333 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
PDE8A-212ENST00000560333 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
PDE8A-212ENST00000560333 MAMSTRQ6ZN01 415 aa18.59■□□□□ 0.57
PDE8A-212ENST00000560333 SEC24BO95487 1268 aa18.58■□□□□ 0.56
PDE8A-212ENST00000560333 POTEJP0CG39 1038 aa18.58■□□□□ 0.56
PDE8A-212ENST00000560333 SPOCK2Q92563 424 aa18.58■□□□□ 0.56
PDE8A-212ENST00000560333 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
PDE8A-212ENST00000560333 IER5LQ5T953 404 aa18.56■□□□□ 0.56
PDE8A-212ENST00000560333 PCDHB8Q9UN66 801 aa18.55■□□□□ 0.56
PDE8A-212ENST00000560333 CFTRP13569 1480 aa18.53■□□□□ 0.56
PDE8A-212ENST00000560333 CHRM1P11229 460 aaPredicted RBP18.51■□□□□ 0.55
PDE8A-212ENST00000560333 COLQQ9Y215 455 aaPredicted RBP18.51■□□□□ 0.55
PDE8A-212ENST00000560333 SCUBE2Q9NQ36 999 aa18.48■□□□□ 0.55
PDE8A-212ENST00000560333 ZNF467Q7Z7K2 595 aaPredicted RBP18.47■□□□□ 0.55
PDE8A-212ENST00000560333 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
PDE8A-212ENST00000560333 WIZO95785 1651 aa18.45■□□□□ 0.54
PDE8A-212ENST00000560333 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDE8A-212ENST00000560333 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
PDE8A-212ENST00000560333 PLCG2P16885 1265 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms