RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 HIRIP3Q9BW71 556 aaPredicted RBP12.72□□□□□ -0.37
NEO1-208ENST00000560328 BCL11AQ9H165 835 aa12.71□□□□□ -0.37
NEO1-208ENST00000560328 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
NEO1-208ENST00000560328 CUX2O14529 1486 aa12.69□□□□□ -0.38
NEO1-208ENST00000560328 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
NEO1-208ENST00000560328 FKBP8Q14318 412 aa12.67□□□□□ -0.38
NEO1-208ENST00000560328 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
NEO1-208ENST00000560328 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
NEO1-208ENST00000560328 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
NEO1-208ENST00000560328 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
NEO1-208ENST00000560328 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
NEO1-208ENST00000560328 MIER1Q8N108 512 aa12.66□□□□□ -0.38
NEO1-208ENST00000560328 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
NEO1-208ENST00000560328 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
NEO1-208ENST00000560328 FHAD1B1AJZ9 1412 aa12.61□□□□□ -0.39
NEO1-208ENST00000560328 WIZO95785 1651 aa12.61□□□□□ -0.39
NEO1-208ENST00000560328 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
NEO1-208ENST00000560328 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
NEO1-208ENST00000560328 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
NEO1-208ENST00000560328 SENP3Q9H4L4 574 aaPredicted RBP12.59□□□□□ -0.39
NEO1-208ENST00000560328 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
NEO1-208ENST00000560328 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
NEO1-208ENST00000560328 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
NEO1-208ENST00000560328 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
NEO1-208ENST00000560328 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
NEO1-208ENST00000560328 VPS8Q8N3P4 1428 aa12.53□□□□□ -0.4
NEO1-208ENST00000560328 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
NEO1-208ENST00000560328 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
NEO1-208ENST00000560328 KANK4Q5T7N3 995 aaPredicted RBP12.51□□□□□ -0.41
NEO1-208ENST00000560328 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
NEO1-208ENST00000560328 CADPSQ9ULU8 1353 aa12.5□□□□□ -0.41
NEO1-208ENST00000560328 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
NEO1-208ENST00000560328 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
NEO1-208ENST00000560328 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
NEO1-208ENST00000560328 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
NEO1-208ENST00000560328 SMARCA4P51532 1647 aa12.47□□□□□ -0.41
NEO1-208ENST00000560328 IRX6P78412 446 aaPredicted RBP12.46□□□□□ -0.41
NEO1-208ENST00000560328 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
NEO1-208ENST00000560328 CDCA8Q53HL2 280 aa12.45□□□□□ -0.42
NEO1-208ENST00000560328 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
NEO1-208ENST00000560328 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
NEO1-208ENST00000560328 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
NEO1-208ENST00000560328 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
NEO1-208ENST00000560328 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
NEO1-208ENST00000560328 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
NEO1-208ENST00000560328 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
NEO1-208ENST00000560328 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
NEO1-208ENST00000560328 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
NEO1-208ENST00000560328 C14orf37Q86TY3 774 aa12.4□□□□□ -0.42
NEO1-208ENST00000560328 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
NEO1-208ENST00000560328 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
NEO1-208ENST00000560328 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
NEO1-208ENST00000560328 CFAP53Q96M91 514 aa12.37□□□□□ -0.43
NEO1-208ENST00000560328 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
NEO1-208ENST00000560328 KANK1Q14678 1352 aa12.36□□□□□ -0.43
NEO1-208ENST00000560328 FHOD3Q2V2M9 1422 aa12.35□□□□□ -0.43
NEO1-208ENST00000560328 POGKQ9P215 609 aa12.35□□□□□ -0.43
NEO1-208ENST00000560328 PKD2Q13563 968 aa12.35□□□□□ -0.43
NEO1-208ENST00000560328 FOXD1Q16676 465 aa12.35□□□□□ -0.43
NEO1-208ENST00000560328 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
NEO1-208ENST00000560328 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
NEO1-208ENST00000560328 RAB3GAP2Q9H2M9 1393 aa12.34□□□□□ -0.43
NEO1-208ENST00000560328 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
NEO1-208ENST00000560328 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
NEO1-208ENST00000560328 TMF1P82094 1093 aa12.31□□□□□ -0.44
NEO1-208ENST00000560328 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
NEO1-208ENST00000560328 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
NEO1-208ENST00000560328 MLECQ14165 292 aa12.31□□□□□ -0.44
NEO1-208ENST00000560328 GGT6Q6P531 493 aa12.31□□□□□ -0.44
NEO1-208ENST00000560328 EFCAB2Q5VUJ9 269 aa12.3□□□□□ -0.44
NEO1-208ENST00000560328 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
NEO1-208ENST00000560328 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
NEO1-208ENST00000560328 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
NEO1-208ENST00000560328 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
NEO1-208ENST00000560328 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
NEO1-208ENST00000560328 NUP155O75694 1391 aa12.28□□□□□ -0.44
NEO1-208ENST00000560328 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
NEO1-208ENST00000560328 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
NEO1-208ENST00000560328 A0A0G2JS52 829 aa12.27□□□□□ -0.45
NEO1-208ENST00000560328 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
NEO1-208ENST00000560328 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEO1-208ENST00000560328 MAPK8IP3Q9UPT6 1336 aa12.25□□□□□ -0.45
NEO1-208ENST00000560328 CCDC18Q5T9S5 1454 aa12.23□□□□□ -0.45
NEO1-208ENST00000560328 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
NEO1-208ENST00000560328 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
NEO1-208ENST00000560328 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
NEO1-208ENST00000560328 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEO1-208ENST00000560328 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
NEO1-208ENST00000560328 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
NEO1-208ENST00000560328 LMOD2Q6P5Q4 547 aa12.21□□□□□ -0.45
NEO1-208ENST00000560328 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
NEO1-208ENST00000560328 CCER2I3L3R5 266 aa12.21□□□□□ -0.46
NEO1-208ENST00000560328 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
NEO1-208ENST00000560328 IGF1RP08069 1367 aa12.2□□□□□ -0.46
NEO1-208ENST00000560328 NBR1Q14596 966 aa12.2□□□□□ -0.46
NEO1-208ENST00000560328 KIF3BO15066 747 aa12.2□□□□□ -0.46
NEO1-208ENST00000560328 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
NEO1-208ENST00000560328 ANP32BQ92688 251 aaKnown RBP12.2□□□□□ -0.46
NEO1-208ENST00000560328 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
NEO1-208ENST00000560328 STK26Q9P289 416 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms