RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 FAM69CQ0P6D2 419 aa36.33■■■■□ 3.41
PSEN1-225ENST00000560005 RUSC2Q8N2Y8 1516 aa36.32■■■■□ 3.4
PSEN1-225ENST00000560005 ABCC10Q5T3U5 1492 aa36.31■■■■□ 3.4
PSEN1-225ENST00000560005 NPM1P06748 294 aaKnown RBP eCLIP36.28■■■■□ 3.4
PSEN1-225ENST00000560005 MAPKBP1O60336 1514 aa36.25■■■■□ 3.39
PSEN1-225ENST00000560005 DIP2BQ9P265 1576 aa36.22■■■■□ 3.39
PSEN1-225ENST00000560005 ADCY10Q96PN6 1610 aa36.19■■■■□ 3.38
PSEN1-225ENST00000560005 KDM6BO15054 1643 aa36.08■■■■□ 3.37
PSEN1-225ENST00000560005 KIAA0586Q9BVV6 1533 aa36.05■■■■□ 3.36
PSEN1-225ENST00000560005 KDM4FA0A1W2PPD8 638 aa36.02■■■■□ 3.36
PSEN1-225ENST00000560005 TSPOAP1O95153 1857 aa36■■■■□ 3.35
PSEN1-225ENST00000560005 IGF1RP08069 1367 aa35.96■■■■□ 3.35
PSEN1-225ENST00000560005 CUL7Q14999 1698 aa35.9■■■■□ 3.34
PSEN1-225ENST00000560005 KIF27Q86VH2 1401 aa35.88■■■■□ 3.33
PSEN1-225ENST00000560005 PTPRGP23470 1445 aa35.86■■■■□ 3.33
PSEN1-225ENST00000560005 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
PSEN1-225ENST00000560005 ABCC2Q92887 1545 aa35.75■■■■□ 3.31
PSEN1-225ENST00000560005 TNIKQ9UKE5 1360 aa35.73■■■■□ 3.31
PSEN1-225ENST00000560005 CARMIL2Q6F5E8 1435 aa35.72■■■■□ 3.31
PSEN1-225ENST00000560005 ASXL2Q76L83 1435 aa35.71■■■■□ 3.31
PSEN1-225ENST00000560005 CARMIL1Q5VZK9 1371 aa35.7■■■■□ 3.31
PSEN1-225ENST00000560005 PLB1Q6P1J6 1458 aa35.67■■■■□ 3.3
PSEN1-225ENST00000560005 PPRC1Q5VV67 1664 aaKnown RBP35.67■■■■□ 3.3
PSEN1-225ENST00000560005 GLI2P10070 1586 aa35.66■■■■□ 3.3
PSEN1-225ENST00000560005 IQGAP2Q13576 1575 aa35.62■■■■□ 3.29
PSEN1-225ENST00000560005 ILDR1Q86SU0 546 aaPredicted RBP35.6■■■■□ 3.29
PSEN1-225ENST00000560005 UHRF1BP1LA0JNW5 1464 aa35.6■■■■□ 3.29
PSEN1-225ENST00000560005 ADGRL1O94910 1474 aa35.58■■■■□ 3.29
PSEN1-225ENST00000560005 UACAQ9BZF9 1416 aa35.56■■■■□ 3.28
PSEN1-225ENST00000560005 COL17A1Q9UMD9 1497 aaPredicted RBP35.51■■■■□ 3.28
PSEN1-225ENST00000560005 DISP1Q96F81 1524 aa35.51■■■■□ 3.27
PSEN1-225ENST00000560005 EPRSP07814 1512 aaKnown RBP35.48■■■■□ 3.27
PSEN1-225ENST00000560005 KDM5BQ9UGL1 1544 aa35.45■■■■□ 3.27
PSEN1-225ENST00000560005 MAP3K4Q9Y6R4 1608 aa35.45■■■■□ 3.27
PSEN1-225ENST00000560005 TEX14Q8IWB6 1497 aa35.4■■■■□ 3.26
PSEN1-225ENST00000560005 ZCCHC11Q5TAX3 1644 aaKnown RBP35.39■■■■□ 3.26
PSEN1-225ENST00000560005 UGGT2Q9NYU1 1516 aa35.37■■■■□ 3.25
PSEN1-225ENST00000560005 KIAA0556O60303 1618 aa35.31■■■■□ 3.24
PSEN1-225ENST00000560005 HECW2Q9P2P5 1572 aa35.3■■■■□ 3.24
PSEN1-225ENST00000560005 RAPGEF2Q9Y4G8 1499 aa35.3■■■■□ 3.24
PSEN1-225ENST00000560005 WDR7Q9Y4E6 1490 aa35.24■■■■□ 3.23
PSEN1-225ENST00000560005 CD109Q6YHK3 1445 aa35.11■■■■□ 3.21
PSEN1-225ENST00000560005 MAGI3Q5TCQ9 1506 aa35.09■■■■□ 3.21
PSEN1-225ENST00000560005 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
PSEN1-225ENST00000560005 CFAP43Q8NDM7 1665 aa35.07■■■■□ 3.2
PSEN1-225ENST00000560005 CTTNBP2Q8WZ74 1663 aa35.04■■■■□ 3.2
PSEN1-225ENST00000560005 ABCA8O94911 1581 aa35.02■■■■□ 3.2
PSEN1-225ENST00000560005 GOLGA3Q08378 1498 aa35.01■■■■□ 3.19
PSEN1-225ENST00000560005 KIF21BO75037 1637 aa34.95■■■■□ 3.18
PSEN1-225ENST00000560005 ARAP3Q8WWN8 1544 aa34.83■■■■□ 3.17
PSEN1-225ENST00000560005 ARID3CA6NKF2 412 aa34.82■■■■□ 3.16
PSEN1-225ENST00000560005 PRXQ9BXM0 1461 aa34.78■■■■□ 3.16
PSEN1-225ENST00000560005 ATP10BO94823 1461 aa34.74■■■■□ 3.15
PSEN1-225ENST00000560005 P3H3Q8IVL6 736 aa34.71■■■■□ 3.15
PSEN1-225ENST00000560005 FAM9AQ8IZU1 332 aaPredicted RBP34.69■■■■□ 3.14
PSEN1-225ENST00000560005 FBXO41Q8TF61 875 aa34.69■■■■□ 3.14
PSEN1-225ENST00000560005 PTPRMP28827 1452 aa34.69■■■■□ 3.14
PSEN1-225ENST00000560005 ABCA9Q8IUA7 1624 aa34.69■■■■□ 3.14
PSEN1-225ENST00000560005 ADAMTSL3P82987 1691 aa34.67■■■■□ 3.14
PSEN1-225ENST00000560005 PHLDB1Q86UU1 1377 aa34.67■■■■□ 3.14
PSEN1-225ENST00000560005 RAPGEF3O95398 923 aa34.65■■■■□ 3.14
PSEN1-225ENST00000560005 NEO1Q92859 1461 aa34.58■■■■□ 3.13
PSEN1-225ENST00000560005 BCORL1Q5H9F3 1711 aa34.54■■■■□ 3.12
PSEN1-225ENST00000560005 FRMPD1Q5SYB0 1578 aa34.53■■■■□ 3.12
PSEN1-225ENST00000560005 RAPGEF6Q8TEU7 1601 aa34.52■■■■□ 3.12
PSEN1-225ENST00000560005 ARID4BQ4LE39 1312 aaPredicted RBP34.52■■■■□ 3.12
PSEN1-225ENST00000560005 MADDQ8WXG6 1647 aa34.52■■■■□ 3.12
PSEN1-225ENST00000560005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.51■■■■□ 3.12
PSEN1-225ENST00000560005 HNRNPUL2Q1KMD3 747 aaKnown RBP34.51■■■■□ 3.12
PSEN1-225ENST00000560005 SAMD9Q5K651 1589 aa34.51■■■■□ 3.12
PSEN1-225ENST00000560005 PCF11O94913 1555 aaKnown RBP34.49■■■■□ 3.11
PSEN1-225ENST00000560005 LMTK3Q96Q04 1460 aa34.45■■■■□ 3.1
PSEN1-225ENST00000560005 NUP153P49790 1475 aaKnown RBP34.41■■■■□ 3.1
PSEN1-225ENST00000560005 ARHGEF40Q8TER5 1519 aa34.4■■■■□ 3.1
PSEN1-225ENST00000560005 RIMS1Q86UR5 1692 aaKnown RBP34.37■■■■□ 3.09
PSEN1-225ENST00000560005 DENND4BO75064 1496 aaPredicted RBP34.34■■■■□ 3.09
PSEN1-225ENST00000560005 CSRNP3Q8WYN3 585 aa34.33■■■■□ 3.09
PSEN1-225ENST00000560005 RICTORQ6R327 1708 aa34.33■■■■□ 3.09
PSEN1-225ENST00000560005 RANGAP1P46060 587 aaPredicted RBP34.31■■■■□ 3.08
PSEN1-225ENST00000560005 FHOD3Q2V2M9 1422 aa34.3■■■■□ 3.08
PSEN1-225ENST00000560005 AKNAQ7Z591 1439 aa34.3■■■■□ 3.08
PSEN1-225ENST00000560005 PLEKHD1A6NEE1 506 aa34.27■■■■□ 3.08
PSEN1-225ENST00000560005 FANCAO15360 1455 aa34.27■■■■□ 3.08
PSEN1-225ENST00000560005 HSPA2P54652 639 aa34.26■■■■□ 3.08
PSEN1-225ENST00000560005 PLPPR3Q6T4P5 718 aa34.26■■■■□ 3.08
PSEN1-225ENST00000560005 CFAP74Q9C0B2 1584 aa34.23■■■■□ 3.07
PSEN1-225ENST00000560005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.22■■■■□ 3.07
PSEN1-225ENST00000560005 POGZQ7Z3K3 1410 aa34.21■■■■□ 3.07
PSEN1-225ENST00000560005 ZMYM4Q5VZL5 1548 aa34.2■■■■□ 3.06
PSEN1-225ENST00000560005 ZFYVE16Q7Z3T8 1539 aa34.18■■■■□ 3.06
PSEN1-225ENST00000560005 TTC37Q6PGP7 1564 aa34.18■■■■□ 3.06
PSEN1-225ENST00000560005 SIGLEC1Q9BZZ2 1709 aa34.17■■■■□ 3.06
PSEN1-225ENST00000560005 YEATS2Q9ULM3 1422 aa34.17■■■■□ 3.06
PSEN1-225ENST00000560005 EFCAB5A4FU69 1503 aa34.14■■■■□ 3.06
PSEN1-225ENST00000560005 MLECQ14165 292 aa34.11■■■■□ 3.05
PSEN1-225ENST00000560005 MAGI2Q86UL8 1455 aa34.1■■■■□ 3.05
PSEN1-225ENST00000560005 HECW1Q76N89 1606 aa34.08■■■■□ 3.05
PSEN1-225ENST00000560005 FER1L4A9Z1Z3 1794 aa34.06■■■■□ 3.04
PSEN1-225ENST00000560005 CERKQ8TCT0 537 aa34.05■■■■□ 3.04
PSEN1-225ENST00000560005 EEA1Q15075 1411 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms