RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 PAK3O75914 559 aaPredicted RBP7.08□□□□□ -1.28
HMG20A-203ENST00000558176 PELP1Q8IZL8 1130 aaKnown RBP7.07□□□□□ -1.28
HMG20A-203ENST00000558176 NPM1P06748 294 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMG20A-203ENST00000558176 MAMSTRQ6ZN01 415 aa7.05□□□□□ -1.28
HMG20A-203ENST00000558176 EHMT2Q96KQ7 1210 aa7.05□□□□□ -1.28
HMG20A-203ENST00000558176 PHF12Q96QT6 1004 aa7.04□□□□□ -1.28
HMG20A-203ENST00000558176 METRNQ9UJH8 293 aa7.04□□□□□ -1.28
HMG20A-203ENST00000558176 MNX1P50219 401 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-203ENST00000558176 MMRN1Q13201 1228 aa7.02□□□□□ -1.29
HMG20A-203ENST00000558176 SCUBE2Q9NQ36 999 aa7.01□□□□□ -1.29
HMG20A-203ENST00000558176 RB1CC1Q8TDY2 1594 aa6.96□□□□□ -1.29
HMG20A-203ENST00000558176 SLC39A7Q92504 469 aa6.96□□□□□ -1.3
HMG20A-203ENST00000558176 C7P10643 843 aa6.95□□□□□ -1.3
HMG20A-203ENST00000558176 ASTLQ6HA08 431 aaPredicted RBP6.95□□□□□ -1.3
HMG20A-203ENST00000558176 MS4A3Q96HJ5 214 aa6.95□□□□□ -1.3
HMG20A-203ENST00000558176 SPNS2Q8IVW8 549 aa6.94□□□□□ -1.3
HMG20A-203ENST00000558176 ATMINO43313 823 aaPredicted RBP6.93□□□□□ -1.3
HMG20A-203ENST00000558176 PROM2Q8N271 834 aa6.93□□□□□ -1.3
HMG20A-203ENST00000558176 TSPYL2Q9H2G4 693 aaPredicted RBP6.9□□□□□ -1.3
HMG20A-203ENST00000558176 CCDC61Q9Y6R9 512 aa6.89□□□□□ -1.31
HMG20A-203ENST00000558176 NACADO15069 1562 aa6.87□□□□□ -1.31
HMG20A-203ENST00000558176 DCAF8L2P0C7V8 631 aa6.87□□□□□ -1.31
HMG20A-203ENST00000558176 KIF12Q96FN5 646 aa6.86□□□□□ -1.31
HMG20A-203ENST00000558176 ATN1P54259 1190 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-203ENST00000558176 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
HMG20A-203ENST00000558176 ST18O60284 1047 aa6.82□□□□□ -1.32
HMG20A-203ENST00000558176 TIE1P35590 1138 aa6.81□□□□□ -1.32
HMG20A-203ENST00000558176 BMP2KQ9NSY1 1161 aaPredicted RBP6.81□□□□□ -1.32
HMG20A-203ENST00000558176 MAP3K13O43283 966 aa6.8□□□□□ -1.32
HMG20A-203ENST00000558176 MIER1Q8N108 512 aa6.8□□□□□ -1.32
HMG20A-203ENST00000558176 TRPC6Q9Y210 931 aa6.8□□□□□ -1.32
HMG20A-203ENST00000558176 POTEFA5A3E0 1075 aa6.79□□□□□ -1.32
HMG20A-203ENST00000558176 RASEFQ8IZ41 740 aa6.79□□□□□ -1.32
HMG20A-203ENST00000558176 BICRAQ9NZM4 1560 aa6.76□□□□□ -1.33
HMG20A-203ENST00000558176 TTLL13PA6NNM8 815 aa6.75□□□□□ -1.33
HMG20A-203ENST00000558176 UNC13AQ9UPW8 1703 aa6.74□□□□□ -1.33
HMG20A-203ENST00000558176 SGIP1Q9BQI5 828 aa6.74□□□□□ -1.33
HMG20A-203ENST00000558176 MYO15BQ96JP2 1530 aa6.74□□□□□ -1.33
HMG20A-203ENST00000558176 SEC24BO95487 1268 aa6.73□□□□□ -1.33
HMG20A-203ENST00000558176 COLQQ9Y215 455 aaPredicted RBP6.73□□□□□ -1.33
HMG20A-203ENST00000558176 IER5LQ5T953 404 aa6.72□□□□□ -1.33
HMG20A-203ENST00000558176 PLCD3Q8N3E9 789 aa6.72□□□□□ -1.33
HMG20A-203ENST00000558176 ZBTB47Q9UFB7 747 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-203ENST00000558176 TRIM35Q9UPQ4 493 aa6.71□□□□□ -1.34
HMG20A-203ENST00000558176 PCDHB13Q9Y5F0 798 aa6.71□□□□□ -1.34
HMG20A-203ENST00000558176 SLAIN1Q8ND83 568 aa6.7□□□□□ -1.34
HMG20A-203ENST00000558176 NUBP1P53384 320 aa6.69□□□□□ -1.34
HMG20A-203ENST00000558176 ZCCHC6Q5VYS8 1495 aaKnown RBP6.67□□□□□ -1.34
HMG20A-203ENST00000558176 IFNL1Q8IU54 200 aa6.66□□□□□ -1.34
HMG20A-203ENST00000558176 MARVELD3Q96A59 401 aa6.66□□□□□ -1.34
HMG20A-203ENST00000558176 FAM212AQ96EL1 285 aa6.66□□□□□ -1.34
HMG20A-203ENST00000558176 TMEM121BQ9BXQ6 578 aaPredicted RBP6.66□□□□□ -1.34
HMG20A-203ENST00000558176 CECR2Q9BXF3 1484 aa6.66□□□□□ -1.34
HMG20A-203ENST00000558176 SHROOM4Q9ULL8 1493 aa6.66□□□□□ -1.34
HMG20A-203ENST00000558176 SCRIBQ14160 1630 aa6.65□□□□□ -1.34
HMG20A-203ENST00000558176 TMEM106CQ9BVX2 250 aa6.64□□□□□ -1.35
HMG20A-203ENST00000558176 CC2D2AQ9P2K1 1620 aa6.63□□□□□ -1.35
HMG20A-203ENST00000558176 DCAF1Q9Y4B6 1507 aa6.63□□□□□ -1.35
HMG20A-203ENST00000558176 PLCG2P16885 1265 aa6.62□□□□□ -1.35
HMG20A-203ENST00000558176 EIF4G1Q04637 1599 aaKnown RBP6.61□□□□□ -1.35
HMG20A-203ENST00000558176 IRX5P78411 483 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-203ENST00000558176 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
HMG20A-203ENST00000558176 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
HMG20A-203ENST00000558176 FKBP8Q14318 412 aa6.57□□□□□ -1.36
HMG20A-203ENST00000558176 OCEL1Q9H607 264 aa6.57□□□□□ -1.36
HMG20A-203ENST00000558176 DCAF8Q5TAQ9 597 aa6.56□□□□□ -1.36
HMG20A-203ENST00000558176 PYGBP11216 843 aa6.55□□□□□ -1.36
HMG20A-203ENST00000558176 SNPHO15079 494 aa6.53□□□□□ -1.36
HMG20A-203ENST00000558176 EMP3P54852 163 aa6.53□□□□□ -1.36
HMG20A-203ENST00000558176 PCDHB8Q9UN66 801 aa6.53□□□□□ -1.36
HMG20A-203ENST00000558176 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.52□□□□□ -1.37
HMG20A-203ENST00000558176 FBXO3Q9UK99 471 aa6.51□□□□□ -1.37
HMG20A-203ENST00000558176 POTEB3A0JP26 581 aa6.5□□□□□ -1.37
HMG20A-203ENST00000558176 POTEBQ6S5H4 581 aa6.5□□□□□ -1.37
HMG20A-203ENST00000558176 HS3ST6Q96QI5 342 aa6.5□□□□□ -1.37
HMG20A-203ENST00000558176 RNF166Q96A37 237 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-203ENST00000558176 ZNF467Q7Z7K2 595 aaPredicted RBP6.48□□□□□ -1.37
HMG20A-203ENST00000558176 FAM205CA6NFA0 338 aa6.47□□□□□ -1.37
HMG20A-203ENST00000558176 GSE1Q14687 1217 aa6.47□□□□□ -1.37
HMG20A-203ENST00000558176 PDCD7Q8N8D1 485 aaKnown RBP6.47□□□□□ -1.37
HMG20A-203ENST00000558176 GOLGA2Q08379 1002 aa6.46□□□□□ -1.38
HMG20A-203ENST00000558176 C3orf67Q6ZVT6 689 aa6.46□□□□□ -1.38
HMG20A-203ENST00000558176 MKRN3Q13064 507 aaKnown RBP6.45□□□□□ -1.38
HMG20A-203ENST00000558176 L3MBTL3Q96JM7 780 aaPredicted RBP6.45□□□□□ -1.38
HMG20A-203ENST00000558176 DNAJC5Q9H3Z4 198 aa6.45□□□□□ -1.38
HMG20A-203ENST00000558176 CHRM1P11229 460 aaPredicted RBP6.44□□□□□ -1.38
HMG20A-203ENST00000558176 KLHL34Q8N239 644 aa6.44□□□□□ -1.38
HMG20A-203ENST00000558176 PSEN1P49768 467 aa6.42□□□□□ -1.38
HMG20A-203ENST00000558176 VASPP50552 380 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-203ENST00000558176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMG20A-203ENST00000558176 ILDR1Q86SU0 546 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-203ENST00000558176 ERCC6Q03468 1493 aa6.39□□□□□ -1.39
HMG20A-203ENST00000558176 PDAP1Q13442 181 aaKnown RBP6.38□□□□□ -1.39
HMG20A-203ENST00000558176 CUX2O14529 1486 aa6.38□□□□□ -1.39
HMG20A-203ENST00000558176 MYT1LQ9UL68 1186 aa6.37□□□□□ -1.39
HMG20A-203ENST00000558176 NCAPD3P42695 1498 aa6.35□□□□□ -1.39
HMG20A-203ENST00000558176 DPY19L2Q6NUT2 758 aa6.35□□□□□ -1.39
HMG20A-203ENST00000558176 ATAD2BQ9ULI0 1458 aa6.34□□□□□ -1.4
HMG20A-203ENST00000558176 G3V3G9 751 aa6.33□□□□□ -1.4
HMG20A-203ENST00000558176 CABP2Q9NPB3 220 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms