RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
CLPX-202ENST00000558103 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
CLPX-202ENST00000558103 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
CLPX-202ENST00000558103 PCDH10Q9P2E7 1040 aa14.49□□□□□ -0.09
CLPX-202ENST00000558103 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
CLPX-202ENST00000558103 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
CLPX-202ENST00000558103 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
CLPX-202ENST00000558103 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
CLPX-202ENST00000558103 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLPX-202ENST00000558103 LCE2DQ5TA82 110 aaPredicted RBP14.38□□□□□ -0.11
CLPX-202ENST00000558103 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
CLPX-202ENST00000558103 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
CLPX-202ENST00000558103 METRNQ9UJH8 293 aa14.36□□□□□ -0.11
CLPX-202ENST00000558103 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
CLPX-202ENST00000558103 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
CLPX-202ENST00000558103 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
CLPX-202ENST00000558103 C7P10643 843 aa14.24□□□□□ -0.13
CLPX-202ENST00000558103 NUBP1P53384 320 aa14.24□□□□□ -0.13
CLPX-202ENST00000558103 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
CLPX-202ENST00000558103 SLC39A7Q92504 469 aa14.24□□□□□ -0.13
CLPX-202ENST00000558103 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
CLPX-202ENST00000558103 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
CLPX-202ENST00000558103 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
CLPX-202ENST00000558103 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
CLPX-202ENST00000558103 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
CLPX-202ENST00000558103 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
CLPX-202ENST00000558103 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
CLPX-202ENST00000558103 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
CLPX-202ENST00000558103 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.16
CLPX-202ENST00000558103 GSE1Q14687 1217 aa14.06□□□□□ -0.16
CLPX-202ENST00000558103 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
CLPX-202ENST00000558103 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
CLPX-202ENST00000558103 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
CLPX-202ENST00000558103 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
CLPX-202ENST00000558103 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
CLPX-202ENST00000558103 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
CLPX-202ENST00000558103 PYGBP11216 843 aa13.9□□□□□ -0.18
CLPX-202ENST00000558103 CHRM1P11229 460 aaPredicted RBP13.9□□□□□ -0.18
CLPX-202ENST00000558103 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
CLPX-202ENST00000558103 PKD2Q13563 968 aa13.87□□□□□ -0.19
CLPX-202ENST00000558103 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
CLPX-202ENST00000558103 MAP3K13O43283 966 aa13.86□□□□□ -0.19
CLPX-202ENST00000558103 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
CLPX-202ENST00000558103 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
CLPX-202ENST00000558103 SEC24BO95487 1268 aa13.82□□□□□ -0.2
CLPX-202ENST00000558103 ST18O60284 1047 aa13.81□□□□□ -0.2
CLPX-202ENST00000558103 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
CLPX-202ENST00000558103 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
CLPX-202ENST00000558103 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
CLPX-202ENST00000558103 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
CLPX-202ENST00000558103 TIE1P35590 1138 aa13.75□□□□□ -0.21
CLPX-202ENST00000558103 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
CLPX-202ENST00000558103 ABCC9O60706 1549 aa13.74□□□□□ -0.21
CLPX-202ENST00000558103 SPNS2Q8IVW8 549 aa13.74□□□□□ -0.21
CLPX-202ENST00000558103 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
CLPX-202ENST00000558103 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
CLPX-202ENST00000558103 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
CLPX-202ENST00000558103 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
CLPX-202ENST00000558103 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
CLPX-202ENST00000558103 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
CLPX-202ENST00000558103 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
CLPX-202ENST00000558103 RGL2O15211 777 aa13.65□□□□□ -0.22
CLPX-202ENST00000558103 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
CLPX-202ENST00000558103 PSEN1P49768 467 aa13.6□□□□□ -0.23
CLPX-202ENST00000558103 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
CLPX-202ENST00000558103 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
CLPX-202ENST00000558103 IER5LQ5T953 404 aa13.58□□□□□ -0.24
CLPX-202ENST00000558103 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
CLPX-202ENST00000558103 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
CLPX-202ENST00000558103 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
CLPX-202ENST00000558103 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
CLPX-202ENST00000558103 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
CLPX-202ENST00000558103 TMEM121BQ9BXQ6 578 aaPredicted RBP13.48□□□□□ -0.25
CLPX-202ENST00000558103 PLCG2P16885 1265 aa13.47□□□□□ -0.25
CLPX-202ENST00000558103 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
CLPX-202ENST00000558103 STK25O00506 426 aa13.42□□□□□ -0.26
CLPX-202ENST00000558103 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
CLPX-202ENST00000558103 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
CLPX-202ENST00000558103 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
CLPX-202ENST00000558103 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
CLPX-202ENST00000558103 SNPHO15079 494 aa13.38□□□□□ -0.27
CLPX-202ENST00000558103 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
CLPX-202ENST00000558103 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
CLPX-202ENST00000558103 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
CLPX-202ENST00000558103 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
CLPX-202ENST00000558103 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
CLPX-202ENST00000558103 KRTAP3-3Q9BYR6 98 aa13.32□□□□□ -0.28
CLPX-202ENST00000558103 KRTAP3-2Q9BYR7 98 aa13.32□□□□□ -0.28
CLPX-202ENST00000558103 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.32□□□□□ -0.28
CLPX-202ENST00000558103 EMP3P54852 163 aa13.31□□□□□ -0.28
CLPX-202ENST00000558103 POTEB3A0JP26 581 aa13.3□□□□□ -0.28
CLPX-202ENST00000558103 POTEBQ6S5H4 581 aa13.3□□□□□ -0.28
CLPX-202ENST00000558103 SOX12O15370 315 aa13.28□□□□□ -0.28
CLPX-202ENST00000558103 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
CLPX-202ENST00000558103 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
CLPX-202ENST00000558103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■■■■□ 20.1
CLPX-202ENST00000558103 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
CLPX-202ENST00000558103 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
CLPX-202ENST00000558103 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
CLPX-202ENST00000558103 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms