RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 VPS8Q8N3P4 1428 aa32.05■■■□□ 2.72
SNRPA1-205ENST00000558036 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
SNRPA1-205ENST00000558036 FBLN2P98095 1184 aa31.99■■■□□ 2.71
SNRPA1-205ENST00000558036 P3H3Q8IVL6 736 aa31.98■■■□□ 2.71
SNRPA1-205ENST00000558036 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
SNRPA1-205ENST00000558036 GRIN2AQ12879 1464 aa31.97■■■□□ 2.71
SNRPA1-205ENST00000558036 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
SNRPA1-205ENST00000558036 PCGF6Q9BYE7 350 aa31.93■■■□□ 2.7
SNRPA1-205ENST00000558036 TTBK1Q5TCY1 1321 aaPredicted RBP31.92■■■□□ 2.7
SNRPA1-205ENST00000558036 FHOD3Q2V2M9 1422 aa31.86■■■□□ 2.69
SNRPA1-205ENST00000558036 IQGAP2Q13576 1575 aa31.83■■■□□ 2.69
SNRPA1-205ENST00000558036 EFCAB5A4FU69 1503 aa31.83■■■□□ 2.69
SNRPA1-205ENST00000558036 TRIM26Q12899 539 aaPredicted RBP31.82■■■□□ 2.69
SNRPA1-205ENST00000558036 CEP170Q5SW79 1584 aa31.79■■■□□ 2.68
SNRPA1-205ENST00000558036 KIAA0586Q9BVV6 1533 aa31.77■■■□□ 2.68
SNRPA1-205ENST00000558036 APLP2Q06481 763 aa31.76■■■□□ 2.68
SNRPA1-205ENST00000558036 SAMD9Q5K651 1589 aa31.76■■■□□ 2.67
SNRPA1-205ENST00000558036 NUP160Q12769 1436 aa31.71■■■□□ 2.67
SNRPA1-205ENST00000558036 UGGT2Q9NYU1 1516 aa31.65■■■□□ 2.66
SNRPA1-205ENST00000558036 CHD1O14646 1710 aa31.63■■■□□ 2.65
SNRPA1-205ENST00000558036 ATP1B4Q9UN42 357 aaPredicted RBP31.63■■■□□ 2.65
SNRPA1-205ENST00000558036 PCF11O94913 1555 aaKnown RBP31.62■■■□□ 2.65
SNRPA1-205ENST00000558036 FMN1Q68DA7 1419 aa31.59■■■□□ 2.65
SNRPA1-205ENST00000558036 KANK4Q5T7N3 995 aaPredicted RBP31.59■■■□□ 2.65
SNRPA1-205ENST00000558036 DISP1Q96F81 1524 aa31.57■■■□□ 2.64
SNRPA1-205ENST00000558036 JPH4Q96JJ6 628 aa31.55■■■□□ 2.64
SNRPA1-205ENST00000558036 CASKIN1Q8WXD9 1431 aa31.53■■■□□ 2.64
SNRPA1-205ENST00000558036 KIAA0556O60303 1618 aa31.51■■■□□ 2.64
SNRPA1-205ENST00000558036 FYCO1Q9BQS8 1478 aa31.51■■■□□ 2.64
SNRPA1-205ENST00000558036 TIAM1Q13009 1591 aa31.46■■■□□ 2.63
SNRPA1-205ENST00000558036 MAP3K1Q13233 1512 aa31.39■■■□□ 2.62
SNRPA1-205ENST00000558036 CARMIL2Q6F5E8 1435 aa31.38■■■□□ 2.61
SNRPA1-205ENST00000558036 PRG4Q92954 1404 aaPredicted RBP31.35■■■□□ 2.61
SNRPA1-205ENST00000558036 CFAP43Q8NDM7 1665 aa31.34■■■□□ 2.61
SNRPA1-205ENST00000558036 LRRC9Q6ZRR7 1453 aa31.34■■■□□ 2.61
SNRPA1-205ENST00000558036 LRRIQ1Q96JM4 1722 aa31.31■■■□□ 2.6
SNRPA1-205ENST00000558036 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
SNRPA1-205ENST00000558036 HECW1Q76N89 1606 aa31.25■■■□□ 2.59
SNRPA1-205ENST00000558036 CLASP1Q7Z460 1538 aa31.25■■■□□ 2.59
SNRPA1-205ENST00000558036 SHROOM2Q13796 1616 aa31.24■■■□□ 2.59
SNRPA1-205ENST00000558036 PLB1Q6P1J6 1458 aa31.23■■■□□ 2.59
SNRPA1-205ENST00000558036 EPRSP07814 1512 aaKnown RBP31.21■■■□□ 2.59
SNRPA1-205ENST00000558036 CDK13Q14004 1512 aaKnown RBP31.2■■■□□ 2.58
SNRPA1-205ENST00000558036 ERCC6L2Q5T890 1561 aa31.19■■■□□ 2.58
SNRPA1-205ENST00000558036 RAPGEF6Q8TEU7 1601 aa31.18■■■□□ 2.58
SNRPA1-205ENST00000558036 NUP153P49790 1475 aaKnown RBP31.18■■■□□ 2.58
SNRPA1-205ENST00000558036 CCDC18Q5T9S5 1454 aa31.18■■■□□ 2.58
SNRPA1-205ENST00000558036 MTUS2Q5JR59 1369 aa31.17■■■□□ 2.58
SNRPA1-205ENST00000558036 PTPRGP23470 1445 aa31.13■■■□□ 2.57
SNRPA1-205ENST00000558036 PHLDB1Q86UU1 1377 aa31.12■■■□□ 2.57
SNRPA1-205ENST00000558036 MAGI3Q5TCQ9 1506 aa31.11■■■□□ 2.57
SNRPA1-205ENST00000558036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
SNRPA1-205ENST00000558036 HNRNPUL2Q1KMD3 747 aaKnown RBP31.08■■■□□ 2.57
SNRPA1-205ENST00000558036 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
SNRPA1-205ENST00000558036 RRBP1Q9P2E9 1410 aaKnown RBP31.06■■■□□ 2.56
SNRPA1-205ENST00000558036 ABCA8O94911 1581 aa31.05■■■□□ 2.56
SNRPA1-205ENST00000558036 EHBP1L1Q8N3D4 1523 aa31.03■■■□□ 2.56
SNRPA1-205ENST00000558036 CCNB3Q8WWL7 1395 aa31.02■■■□□ 2.56
SNRPA1-205ENST00000558036 NCOA2Q15596 1464 aa30.98■■■□□ 2.55
SNRPA1-205ENST00000558036 SUPT6HQ7KZ85 1726 aaKnown RBP30.93■■■□□ 2.54
SNRPA1-205ENST00000558036 UACAQ9BZF9 1416 aa30.93■■■□□ 2.54
SNRPA1-205ENST00000558036 ATP10BO94823 1461 aa30.91■■■□□ 2.54
SNRPA1-205ENST00000558036 CDK11AQ9UQ88 783 aaPredicted RBP30.91■■■□□ 2.54
SNRPA1-205ENST00000558036 ITGAEP38570 1179 aa30.89■■■□□ 2.54
SNRPA1-205ENST00000558036 FAM50AQ14320 339 aaKnown RBP30.89■■■□□ 2.54
SNRPA1-205ENST00000558036 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
SNRPA1-205ENST00000558036 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
SNRPA1-205ENST00000558036 MYOM3Q5VTT5 1437 aa30.84■■■□□ 2.53
SNRPA1-205ENST00000558036 HRCP23327 699 aa30.82■■■□□ 2.52
SNRPA1-205ENST00000558036 TROQ12816 1431 aaPredicted RBP30.82■■■□□ 2.52
SNRPA1-205ENST00000558036 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
SNRPA1-205ENST00000558036 PLEKHD1A6NEE1 506 aa30.78■■■□□ 2.52
SNRPA1-205ENST00000558036 KIF14Q15058 1648 aa30.73■■■□□ 2.51
SNRPA1-205ENST00000558036 UHRF1BP1LA0JNW5 1464 aa30.68■■■□□ 2.5
SNRPA1-205ENST00000558036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.67■■■□□ 2.5
SNRPA1-205ENST00000558036 PTPN23Q9H3S7 1636 aa30.66■■■□□ 2.5
SNRPA1-205ENST00000558036 CCER1Q8TC90 406 aaPredicted RBP30.65■■■□□ 2.5
SNRPA1-205ENST00000558036 ADCY10Q96PN6 1610 aa30.64■■■□□ 2.5
SNRPA1-205ENST00000558036 KDM5BQ9UGL1 1544 aa30.61■■■□□ 2.49
SNRPA1-205ENST00000558036 MIA2Q96PC5 1412 aa30.61■■■□□ 2.49
SNRPA1-205ENST00000558036 ZCCHC11Q5TAX3 1644 aaKnown RBP30.6■■■□□ 2.49
SNRPA1-205ENST00000558036 GPATCH8Q9UKJ3 1502 aaKnown RBP30.58■■■□□ 2.49
SNRPA1-205ENST00000558036 TCOF1Q13428 1488 aaKnown RBP30.58■■■□□ 2.49
SNRPA1-205ENST00000558036 ZNF644Q9H582 1327 aaPredicted RBP30.57■■■□□ 2.48
SNRPA1-205ENST00000558036 ABCC10Q5T3U5 1492 aa30.56■■■□□ 2.48
SNRPA1-205ENST00000558036 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
SNRPA1-205ENST00000558036 CFDP1Q9UEE9 299 aaPredicted RBP30.55■■■□□ 2.48
SNRPA1-205ENST00000558036 KCNH8Q96L42 1107 aa30.53■■■□□ 2.48
SNRPA1-205ENST00000558036 ZNF777Q9ULD5 760 aaPredicted RBP30.5■■■□□ 2.47
SNRPA1-205ENST00000558036 ITSN2Q9NZM3 1697 aa30.48■■■□□ 2.47
SNRPA1-205ENST00000558036 RAB3GAP2Q9H2M9 1393 aa30.45■■■□□ 2.47
SNRPA1-205ENST00000558036 CDC42BPAQ5VT25 1732 aa30.45■■■□□ 2.46
SNRPA1-205ENST00000558036 CHIC2Q9UKJ5 165 aa30.44■■■□□ 2.46
SNRPA1-205ENST00000558036 SETD5Q9C0A6 1442 aa30.43■■■□□ 2.46
SNRPA1-205ENST00000558036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.43■■■□□ 2.46
SNRPA1-205ENST00000558036 CAMSAP2Q08AD1 1489 aa30.43■■■□□ 2.46
SNRPA1-205ENST00000558036 TTC37Q6PGP7 1564 aa30.43■■■□□ 2.46
SNRPA1-205ENST00000558036 ZEB1P37275 1124 aaPredicted RBP30.38■■■□□ 2.45
SNRPA1-205ENST00000558036 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
SNRPA1-205ENST00000558036 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms