RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
RDH11-210ENST00000557331 ABCC10Q5T3U5 1492 aa18.09■□□□□ 0.49
RDH11-210ENST00000557331 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.48
RDH11-210ENST00000557331 MAPKBP1O60336 1514 aa18.08■□□□□ 0.48
RDH11-210ENST00000557331 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
RDH11-210ENST00000557331 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
RDH11-210ENST00000557331 KIF27Q86VH2 1401 aa18■□□□□ 0.47
RDH11-210ENST00000557331 IGF1RP08069 1367 aa17.99■□□□□ 0.47
RDH11-210ENST00000557331 DIP2BQ9P265 1576 aa17.96■□□□□ 0.46
RDH11-210ENST00000557331 CUL7Q14999 1698 aa17.95■□□□□ 0.46
RDH11-210ENST00000557331 ADCY10Q96PN6 1610 aa17.94■□□□□ 0.46
RDH11-210ENST00000557331 PTPRGP23470 1445 aa17.93■□□□□ 0.46
RDH11-210ENST00000557331 CARMIL2Q6F5E8 1435 aa17.93■□□□□ 0.46
RDH11-210ENST00000557331 KDM6BO15054 1643 aa17.89■□□□□ 0.45
RDH11-210ENST00000557331 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
RDH11-210ENST00000557331 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
RDH11-210ENST00000557331 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
RDH11-210ENST00000557331 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
RDH11-210ENST00000557331 KDM4FA0A1W2PPD8 638 aa17.84■□□□□ 0.45
RDH11-210ENST00000557331 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
RDH11-210ENST00000557331 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
RDH11-210ENST00000557331 GLI2P10070 1586 aa17.79■□□□□ 0.44
RDH11-210ENST00000557331 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
RDH11-210ENST00000557331 UACAQ9BZF9 1416 aa17.77■□□□□ 0.44
RDH11-210ENST00000557331 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
RDH11-210ENST00000557331 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
RDH11-210ENST00000557331 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
RDH11-210ENST00000557331 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
RDH11-210ENST00000557331 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
RDH11-210ENST00000557331 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
RDH11-210ENST00000557331 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
RDH11-210ENST00000557331 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
RDH11-210ENST00000557331 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
RDH11-210ENST00000557331 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
RDH11-210ENST00000557331 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
RDH11-210ENST00000557331 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
RDH11-210ENST00000557331 GOLGA3Q08378 1498 aa17.6■□□□□ 0.41
RDH11-210ENST00000557331 WDR7Q9Y4E6 1490 aa17.58■□□□□ 0.41
RDH11-210ENST00000557331 COL17A1Q9UMD9 1497 aaPredicted RBP17.57■□□□□ 0.4
RDH11-210ENST00000557331 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
RDH11-210ENST00000557331 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
RDH11-210ENST00000557331 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
RDH11-210ENST00000557331 MAGI3Q5TCQ9 1506 aa17.54■□□□□ 0.4
RDH11-210ENST00000557331 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
RDH11-210ENST00000557331 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
RDH11-210ENST00000557331 CFAP43Q8NDM7 1665 aa17.48■□□□□ 0.39
RDH11-210ENST00000557331 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
RDH11-210ENST00000557331 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
RDH11-210ENST00000557331 ABCA8O94911 1581 aa17.45■□□□□ 0.38
RDH11-210ENST00000557331 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
RDH11-210ENST00000557331 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
RDH11-210ENST00000557331 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
RDH11-210ENST00000557331 ATP10BO94823 1461 aa17.32■□□□□ 0.36
RDH11-210ENST00000557331 NEO1Q92859 1461 aa17.31■□□□□ 0.36
RDH11-210ENST00000557331 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
RDH11-210ENST00000557331 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
RDH11-210ENST00000557331 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
RDH11-210ENST00000557331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
RDH11-210ENST00000557331 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
RDH11-210ENST00000557331 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
RDH11-210ENST00000557331 KIF21BO75037 1637 aa17.25■□□□□ 0.35
RDH11-210ENST00000557331 PTPRMP28827 1452 aa17.24■□□□□ 0.35
RDH11-210ENST00000557331 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
RDH11-210ENST00000557331 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
RDH11-210ENST00000557331 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
RDH11-210ENST00000557331 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
RDH11-210ENST00000557331 ADAMTSL3P82987 1691 aa17.21■□□□□ 0.35
RDH11-210ENST00000557331 SAMD9Q5K651 1589 aa17.21■□□□□ 0.35
RDH11-210ENST00000557331 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
RDH11-210ENST00000557331 EEA1Q15075 1411 aa17.2■□□□□ 0.34
RDH11-210ENST00000557331 POGZQ7Z3K3 1410 aa17.17■□□□□ 0.34
RDH11-210ENST00000557331 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
RDH11-210ENST00000557331 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
RDH11-210ENST00000557331 FHOD3Q2V2M9 1422 aa17.14■□□□□ 0.33
RDH11-210ENST00000557331 BCORL1Q5H9F3 1711 aa17.14■□□□□ 0.33
RDH11-210ENST00000557331 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
RDH11-210ENST00000557331 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
RDH11-210ENST00000557331 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
RDH11-210ENST00000557331 CFAP74Q9C0B2 1584 aa17.12■□□□□ 0.33
RDH11-210ENST00000557331 FANCAO15360 1455 aa17.11■□□□□ 0.33
RDH11-210ENST00000557331 ARHGEF40Q8TER5 1519 aa17.09■□□□□ 0.33
RDH11-210ENST00000557331 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
RDH11-210ENST00000557331 MADDQ8WXG6 1647 aa17.07■□□□□ 0.32
RDH11-210ENST00000557331 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
RDH11-210ENST00000557331 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
RDH11-210ENST00000557331 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
RDH11-210ENST00000557331 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
RDH11-210ENST00000557331 RICTORQ6R327 1708 aa17.04■□□□□ 0.32
RDH11-210ENST00000557331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.32
RDH11-210ENST00000557331 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
RDH11-210ENST00000557331 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
RDH11-210ENST00000557331 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
RDH11-210ENST00000557331 PLCH2O75038 1416 aa17.01■□□□□ 0.31
RDH11-210ENST00000557331 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
RDH11-210ENST00000557331 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
RDH11-210ENST00000557331 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
RDH11-210ENST00000557331 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
RDH11-210ENST00000557331 ATP10AO60312 1499 aa16.97■□□□□ 0.31
RDH11-210ENST00000557331 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.3
RDH11-210ENST00000557331 TTC37Q6PGP7 1564 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms