RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 PHF12Q96QT6 1004 aa8.6□□□□□ -1.03
HNRNPC-229ENST00000557157 CC2D2AQ9P2K1 1620 aa8.6□□□□□ -1.03
HNRNPC-229ENST00000557157 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.05
HNRNPC-229ENST00000557157 MIER1Q8N108 512 aa8.51□□□□□ -1.05
HNRNPC-229ENST00000557157 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-229ENST00000557157 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
HNRNPC-229ENST00000557157 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
HNRNPC-229ENST00000557157 ASTLQ6HA08 431 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-229ENST00000557157 BICRAQ9NZM4 1560 aa8.47□□□□□ -1.05
HNRNPC-229ENST00000557157 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
HNRNPC-229ENST00000557157 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-229ENST00000557157 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
HNRNPC-229ENST00000557157 UNC13AQ9UPW8 1703 aa8.45□□□□□ -1.06
HNRNPC-229ENST00000557157 ATMINO43313 823 aaPredicted RBP8.44□□□□□ -1.06
HNRNPC-229ENST00000557157 C7P10643 843 aa8.44□□□□□ -1.06
HNRNPC-229ENST00000557157 KIF12Q96FN5 646 aa8.43□□□□□ -1.06
HNRNPC-229ENST00000557157 METRNQ9UJH8 293 aa8.43□□□□□ -1.06
HNRNPC-229ENST00000557157 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
HNRNPC-229ENST00000557157 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
HNRNPC-229ENST00000557157 POTEB2H3BUK9 544 aa8.4□□□□□ -1.06
HNRNPC-229ENST00000557157 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
HNRNPC-229ENST00000557157 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
HNRNPC-229ENST00000557157 MAP3K13O43283 966 aa8.37□□□□□ -1.07
HNRNPC-229ENST00000557157 TIE1P35590 1138 aa8.37□□□□□ -1.07
HNRNPC-229ENST00000557157 FKBP8Q14318 412 aa8.37□□□□□ -1.07
HNRNPC-229ENST00000557157 CCDC180Q9P1Z9 1646 aa8.36□□□□□ -1.07
HNRNPC-229ENST00000557157 ATN1P54259 1190 aaPredicted RBP8.36□□□□□ -1.07
HNRNPC-229ENST00000557157 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
HNRNPC-229ENST00000557157 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-229ENST00000557157 FAM212AQ96EL1 285 aa8.32□□□□□ -1.08
HNRNPC-229ENST00000557157 NUBP1P53384 320 aa8.31□□□□□ -1.08
HNRNPC-229ENST00000557157 SCUBE2Q9NQ36 999 aa8.31□□□□□ -1.08
HNRNPC-229ENST00000557157 FBXO3Q9UK99 471 aa8.31□□□□□ -1.08
HNRNPC-229ENST00000557157 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
HNRNPC-229ENST00000557157 TRPC6Q9Y210 931 aa8.29□□□□□ -1.08
HNRNPC-229ENST00000557157 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-229ENST00000557157 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
HNRNPC-229ENST00000557157 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
HNRNPC-229ENST00000557157 SEC24BO95487 1268 aa8.27□□□□□ -1.09
HNRNPC-229ENST00000557157 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
HNRNPC-229ENST00000557157 IER5LQ5T953 404 aa8.26□□□□□ -1.09
HNRNPC-229ENST00000557157 POTEMA6NI47 508 aa8.25□□□□□ -1.09
HNRNPC-229ENST00000557157 TRIM35Q9UPQ4 493 aa8.24□□□□□ -1.09
HNRNPC-229ENST00000557157 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
HNRNPC-229ENST00000557157 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
HNRNPC-229ENST00000557157 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
HNRNPC-229ENST00000557157 IFNL1Q8IU54 200 aa8.22□□□□□ -1.09
HNRNPC-229ENST00000557157 MYT1Q01538 1121 aa8.21□□□□□ -1.1
HNRNPC-229ENST00000557157 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
HNRNPC-229ENST00000557157 ILDR2Q71H61 639 aa8.21□□□□□ -1.1
HNRNPC-229ENST00000557157 SOCS7O14512 581 aa8.2□□□□□ -1.1
HNRNPC-229ENST00000557157 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
HNRNPC-229ENST00000557157 TMEM106CQ9BVX2 250 aa8.19□□□□□ -1.1
HNRNPC-229ENST00000557157 COLQQ9Y215 455 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-229ENST00000557157 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
HNRNPC-229ENST00000557157 NACADO15069 1562 aa8.18□□□□□ -1.1
HNRNPC-229ENST00000557157 RIMBP3CA6NJZ7 1639 aa8.17□□□□□ -1.1
HNRNPC-229ENST00000557157 RIMBP3BA6NNM3 1639 aa8.17□□□□□ -1.1
HNRNPC-229ENST00000557157 RIMBP3Q9UFD9 1639 aa8.17□□□□□ -1.1
HNRNPC-229ENST00000557157 PLCG2P16885 1265 aa8.16□□□□□ -1.1
HNRNPC-229ENST00000557157 PYGBP11216 843 aa8.15□□□□□ -1.1
HNRNPC-229ENST00000557157 GSE1Q14687 1217 aa8.15□□□□□ -1.1
HNRNPC-229ENST00000557157 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
HNRNPC-229ENST00000557157 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-229ENST00000557157 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-229ENST00000557157 ZNF467Q7Z7K2 595 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-229ENST00000557157 IRX5P78411 483 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-229ENST00000557157 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
HNRNPC-229ENST00000557157 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-229ENST00000557157 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
HNRNPC-229ENST00000557157 PCDHB8Q9UN66 801 aa8.08□□□□□ -1.12
HNRNPC-229ENST00000557157 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-229ENST00000557157 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
HNRNPC-229ENST00000557157 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
HNRNPC-229ENST00000557157 BAZ1AQ9NRL2 1556 aaPredicted RBP8.04□□□□□ -1.12
HNRNPC-229ENST00000557157 MKRN3Q13064 507 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-229ENST00000557157 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-229ENST00000557157 SNPHO15079 494 aa8.01□□□□□ -1.13
HNRNPC-229ENST00000557157 CYB5RLQ6IPT4 315 aa8.01□□□□□ -1.13
HNRNPC-229ENST00000557157 FBXO41Q8TF61 875 aa8.01□□□□□ -1.13
HNRNPC-229ENST00000557157 SPOCK2Q92563 424 aa8.01□□□□□ -1.13
HNRNPC-229ENST00000557157 ARHGEF11O15085 1522 aa8.01□□□□□ -1.13
HNRNPC-229ENST00000557157 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
HNRNPC-229ENST00000557157 NESP48681 1621 aa8□□□□□ -1.13
HNRNPC-229ENST00000557157 PSEN1P49768 467 aa7.99□□□□□ -1.13
HNRNPC-229ENST00000557157 L3MBTL3Q96JM7 780 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-229ENST00000557157 ST18O60284 1047 aa7.98□□□□□ -1.13
HNRNPC-229ENST00000557157 DCAF8L2P0C7V8 631 aa7.98□□□□□ -1.13
HNRNPC-229ENST00000557157 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
HNRNPC-229ENST00000557157 PDAP1Q13442 181 aaKnown RBP7.97□□□□□ -1.13
HNRNPC-229ENST00000557157 C3orf67Q6ZVT6 689 aa7.97□□□□□ -1.13
HNRNPC-229ENST00000557157 CDAN1Q8IWY9 1227 aa7.96□□□□□ -1.14
HNRNPC-229ENST00000557157 PDCD7Q8N8D1 485 aaKnown RBP7.96□□□□□ -1.14
HNRNPC-229ENST00000557157 CIZ1Q9ULV3 898 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-229ENST00000557157 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
HNRNPC-229ENST00000557157 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-229ENST00000557157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.95□□□□□ -1.144e-12■■■□□ 16.9
HNRNPC-229ENST00000557157 TTBK1Q5TCY1 1321 aaPredicted RBP7.91□□□□□ -1.14
HNRNPC-229ENST00000557157 DISP3Q9P2K9 1392 aa7.9□□□□□ -1.14
HNRNPC-229ENST00000557157 G3V3G9 751 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms