RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 UPF2Q9HAU5 1272 aaKnown RBP10.82□□□□□ -0.68
NUMB-223ENST00000556772 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
NUMB-223ENST00000556772 RRP7BPQ9NSQ0 103 aa10.81□□□□□ -0.68
NUMB-223ENST00000556772 PPP4R2Q9NY27 417 aa10.81□□□□□ -0.68
NUMB-223ENST00000556772 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
NUMB-223ENST00000556772 SOGA1O94964 1423 aa10.8□□□□□ -0.68
NUMB-223ENST00000556772 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.78□□□□□ -0.68
NUMB-223ENST00000556772 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
NUMB-223ENST00000556772 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
NUMB-223ENST00000556772 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.68
NUMB-223ENST00000556772 NEFMP07197 916 aa10.77□□□□□ -0.69
NUMB-223ENST00000556772 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
NUMB-223ENST00000556772 HSP90AA1P07900 732 aaKnown RBP10.76□□□□□ -0.69
NUMB-223ENST00000556772 ANP32BQ92688 251 aaKnown RBP10.76□□□□□ -0.69
NUMB-223ENST00000556772 ARXQ96QS3 562 aa10.76□□□□□ -0.69
NUMB-223ENST00000556772 NOP58Q9Y2X3 529 aaKnown RBP10.75□□□□□ -0.69
NUMB-223ENST00000556772 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
NUMB-223ENST00000556772 GLIPR1L2Q4G1C9 344 aa10.75□□□□□ -0.69
NUMB-223ENST00000556772 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
NUMB-223ENST00000556772 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
NUMB-223ENST00000556772 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
NUMB-223ENST00000556772 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
NUMB-223ENST00000556772 VPS8Q8N3P4 1428 aa10.72□□□□□ -0.69
NUMB-223ENST00000556772 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
NUMB-223ENST00000556772 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
NUMB-223ENST00000556772 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
NUMB-223ENST00000556772 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
NUMB-223ENST00000556772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■□□□□ 9.2
NUMB-223ENST00000556772 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
NUMB-223ENST00000556772 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
NUMB-223ENST00000556772 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
NUMB-223ENST00000556772 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
NUMB-223ENST00000556772 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
NUMB-223ENST00000556772 BAZ1AQ9NRL2 1556 aaPredicted RBP10.68□□□□□ -0.7
NUMB-223ENST00000556772 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
NUMB-223ENST00000556772 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
NUMB-223ENST00000556772 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
NUMB-223ENST00000556772 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
NUMB-223ENST00000556772 BECN1Q14457 450 aa10.65□□□□□ -0.7
NUMB-223ENST00000556772 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
NUMB-223ENST00000556772 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
NUMB-223ENST00000556772 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.71
NUMB-223ENST00000556772 CARD11Q9BXL7 1154 aa10.62□□□□□ -0.71
NUMB-223ENST00000556772 AEBP2Q6ZN18 517 aaPredicted RBP10.62□□□□□ -0.71
NUMB-223ENST00000556772 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
NUMB-223ENST00000556772 ERICH6BQ5W0A0 696 aa10.62□□□□□ -0.71
NUMB-223ENST00000556772 KCNH8Q96L42 1107 aa10.61□□□□□ -0.71
NUMB-223ENST00000556772 HSPA5P11021 654 aaKnown RBP10.6□□□□□ -0.71
NUMB-223ENST00000556772 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
NUMB-223ENST00000556772 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
NUMB-223ENST00000556772 ARID4BQ4LE39 1312 aaPredicted RBP10.59□□□□□ -0.71
NUMB-223ENST00000556772 FHAD1B1AJZ9 1412 aa10.59□□□□□ -0.71
NUMB-223ENST00000556772 RGS3P49796 1198 aa10.58□□□□□ -0.72
NUMB-223ENST00000556772 PPP1R15AO75807 674 aaPredicted RBP10.58□□□□□ -0.72
NUMB-223ENST00000556772 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
NUMB-223ENST00000556772 PDS5BQ9NTI5 1447 aa10.57□□□□□ -0.72
NUMB-223ENST00000556772 DHX57Q6P158 1386 aaKnown RBP10.56□□□□□ -0.72
NUMB-223ENST00000556772 KNSTRNQ9Y448 316 aa10.56□□□□□ -0.72
NUMB-223ENST00000556772 CFDP1Q9UEE9 299 aaPredicted RBP10.55□□□□□ -0.72
NUMB-223ENST00000556772 CYB5RLQ6IPT4 315 aa10.54□□□□□ -0.72
NUMB-223ENST00000556772 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
NUMB-223ENST00000556772 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
NUMB-223ENST00000556772 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
NUMB-223ENST00000556772 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.72
NUMB-223ENST00000556772 ARHGAP35Q9NRY4 1499 aa10.51□□□□□ -0.73
NUMB-223ENST00000556772 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
NUMB-223ENST00000556772 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
NUMB-223ENST00000556772 GOLGA6L22H0YM25 854 aa10.51□□□□□ -0.73
NUMB-223ENST00000556772 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
NUMB-223ENST00000556772 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
NUMB-223ENST00000556772 WIZO95785 1651 aa10.5□□□□□ -0.73
NUMB-223ENST00000556772 CUX2O14529 1486 aa10.5□□□□□ -0.73
NUMB-223ENST00000556772 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
NUMB-223ENST00000556772 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
NUMB-223ENST00000556772 FOXD1Q16676 465 aa10.49□□□□□ -0.73
NUMB-223ENST00000556772 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
NUMB-223ENST00000556772 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
NUMB-223ENST00000556772 RUSC2Q8N2Y8 1516 aa10.48□□□□□ -0.73
NUMB-223ENST00000556772 FTSJ3Q8IY81 847 aaKnown RBP10.48□□□□□ -0.73
NUMB-223ENST00000556772 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
NUMB-223ENST00000556772 RCAN3Q9UKA8 241 aa10.47□□□□□ -0.73
NUMB-223ENST00000556772 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
NUMB-223ENST00000556772 NUDCQ9Y266 331 aa10.47□□□□□ -0.73
NUMB-223ENST00000556772 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
NUMB-223ENST00000556772 CFAP53Q96M91 514 aa10.46□□□□□ -0.74
NUMB-223ENST00000556772 MPHOSPH9Q99550 1183 aa10.45□□□□□ -0.74
NUMB-223ENST00000556772 TOP2AP11388 1531 aaKnown RBP10.45□□□□□ -0.74
NUMB-223ENST00000556772 FANCIQ9NVI1 1328 aa10.44□□□□□ -0.74
NUMB-223ENST00000556772 L3MBTL2Q969R5 705 aa10.43□□□□□ -0.74
NUMB-223ENST00000556772 TMF1P82094 1093 aa10.43□□□□□ -0.74
NUMB-223ENST00000556772 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
NUMB-223ENST00000556772 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
NUMB-223ENST00000556772 PKD2Q13563 968 aa10.41□□□□□ -0.74
NUMB-223ENST00000556772 FMN1Q68DA7 1419 aa10.41□□□□□ -0.74
NUMB-223ENST00000556772 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
NUMB-223ENST00000556772 PTMAP06454 111 aaKnown RBP10.41□□□□□ -0.74
NUMB-223ENST00000556772 RALBP1Q15311 655 aa10.4□□□□□ -0.74
NUMB-223ENST00000556772 TNNT2P45379 298 aaPredicted RBP10.4□□□□□ -0.74
NUMB-223ENST00000556772 SENP3Q9H4L4 574 aaPredicted RBP10.4□□□□□ -0.75
NUMB-223ENST00000556772 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms