RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, human

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-223	ENST00000556772	UPF2	Q9HAU5	1272 aa	Known RBP	10.82	□□□□□ -0.68
NUMB-223	ENST00000556772	ESF1	Q9H501	851 aa	Known RBP	10.81	□□□□□ -0.68
NUMB-223	ENST00000556772	RRP7BP	Q9NSQ0	103 aa		10.81	□□□□□ -0.68
NUMB-223	ENST00000556772	PPP4R2	Q9NY27	417 aa		10.81	□□□□□ -0.68
NUMB-223	ENST00000556772	RBM19	Q9Y4C8	960 aa	Known RBP	10.8	□□□□□ -0.68
NUMB-223	ENST00000556772	SOGA1	O94964	1423 aa		10.8	□□□□□ -0.68
NUMB-223	ENST00000556772	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.78	□□□□□ -0.68
NUMB-223	ENST00000556772	TSHZ2	Q9NRE2	1034 aa		10.78	□□□□□ -0.68
NUMB-223	ENST00000556772	KDM2A	Q9Y2K7	1162 aa		10.78	□□□□□ -0.68
NUMB-223	ENST00000556772	SENP3-EIF4A1	A0A087X0R7	540 aa		10.77	□□□□□ -0.68
NUMB-223	ENST00000556772	NEFM	P07197	916 aa		10.77	□□□□□ -0.69
NUMB-223	ENST00000556772	CECR2	Q9BXF3	1484 aa		10.77	□□□□□ -0.69
NUMB-223	ENST00000556772	HSP90AA1	P07900	732 aa	Known RBP	10.76	□□□□□ -0.69
NUMB-223	ENST00000556772	ANP32B	Q92688	251 aa	Known RBP	10.76	□□□□□ -0.69
NUMB-223	ENST00000556772	ARX	Q96QS3	562 aa		10.76	□□□□□ -0.69
NUMB-223	ENST00000556772	NOP58	Q9Y2X3	529 aa	Known RBP	10.75	□□□□□ -0.69
NUMB-223	ENST00000556772	CCNB3	Q8WWL7	1395 aa		10.75	□□□□□ -0.69
NUMB-223	ENST00000556772	GLIPR1L2	Q4G1C9	344 aa		10.75	□□□□□ -0.69
NUMB-223	ENST00000556772	B4GALNT3	Q6L9W6	998 aa		10.75	□□□□□ -0.69
NUMB-223	ENST00000556772	WDR43	Q15061	677 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
NUMB-223	ENST00000556772	DDRGK1	Q96HY6	314 aa		10.74	□□□□□ -0.69
NUMB-223	ENST00000556772	CCER2	I3L3R5	266 aa		10.74	□□□□□ -0.69
NUMB-223	ENST00000556772	VPS8	Q8N3P4	1428 aa		10.72	□□□□□ -0.69
NUMB-223	ENST00000556772	KIF27	Q86VH2	1401 aa		10.7	□□□□□ -0.7
NUMB-223	ENST00000556772	TIMELESS	Q9UNS1	1208 aa		10.7	□□□□□ -0.7
NUMB-223	ENST00000556772	PPM1G	O15355	546 aa	Predicted RBP	10.7	□□□□□ -0.7
NUMB-223	ENST00000556772	LAS1L	Q9Y4W2	734 aa	Known RBP	10.7	□□□□□ -0.7
NUMB-223	ENST00000556772	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.69	□□□□□ -0.7	3e-7	■□□□□ 9.2
NUMB-223	ENST00000556772	DEK	P35659	375 aa	Known RBP	10.69	□□□□□ -0.7
NUMB-223	ENST00000556772	RTN4	Q9NQC3	1192 aa	Known RBP	10.69	□□□□□ -0.7
NUMB-223	ENST00000556772	TSPY4	P0CV99	314 aa		10.69	□□□□□ -0.7
NUMB-223	ENST00000556772	TSPY10	P0CW01	314 aa		10.69	□□□□□ -0.7
NUMB-223	ENST00000556772	CCDC88B	A6NC98	1476 aa		10.68	□□□□□ -0.7
NUMB-223	ENST00000556772	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.68	□□□□□ -0.7
NUMB-223	ENST00000556772	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.68	□□□□□ -0.7
NUMB-223	ENST00000556772	KANK4	Q5T7N3	995 aa	Predicted RBP	10.68	□□□□□ -0.7
NUMB-223	ENST00000556772	ABCC8	Q09428	1581 aa		10.66	□□□□□ -0.7
NUMB-223	ENST00000556772	SLC24A1	O60721	1099 aa		10.66	□□□□□ -0.7
NUMB-223	ENST00000556772	BECN1	Q14457	450 aa		10.65	□□□□□ -0.7
NUMB-223	ENST00000556772	SETD5	Q9C0A6	1442 aa		10.65	□□□□□ -0.7
NUMB-223	ENST00000556772	MROH2B	Q7Z745	1585 aa		10.65	□□□□□ -0.71
NUMB-223	ENST00000556772	CHGA	P10645	457 aa	Known RBP	10.65	□□□□□ -0.71
NUMB-223	ENST00000556772	CARD11	Q9BXL7	1154 aa		10.62	□□□□□ -0.71
NUMB-223	ENST00000556772	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.62	□□□□□ -0.71
NUMB-223	ENST00000556772	RAB3GAP2	Q9H2M9	1393 aa		10.62	□□□□□ -0.71
NUMB-223	ENST00000556772	ERICH6B	Q5W0A0	696 aa		10.62	□□□□□ -0.71
NUMB-223	ENST00000556772	KCNH8	Q96L42	1107 aa		10.61	□□□□□ -0.71
NUMB-223	ENST00000556772	HSPA5	P11021	654 aa	Known RBP	10.6	□□□□□ -0.71
NUMB-223	ENST00000556772	RGL3	Q3MIN7	710 aa		10.6	□□□□□ -0.71
NUMB-223	ENST00000556772	DNAJC5B	Q9UF47	199 aa		10.59	□□□□□ -0.71
NUMB-223	ENST00000556772	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.59	□□□□□ -0.71
NUMB-223	ENST00000556772	FHAD1	B1AJZ9	1412 aa		10.59	□□□□□ -0.71
NUMB-223	ENST00000556772	RGS3	P49796	1198 aa		10.58	□□□□□ -0.72
NUMB-223	ENST00000556772	PPP1R15A	O75807	674 aa	Predicted RBP	10.58	□□□□□ -0.72
NUMB-223	ENST00000556772	TRIM44	Q96DX7	344 aa	Predicted RBP	10.57	□□□□□ -0.72
NUMB-223	ENST00000556772	PDS5B	Q9NTI5	1447 aa		10.57	□□□□□ -0.72
NUMB-223	ENST00000556772	DHX57	Q6P158	1386 aa	Known RBP	10.56	□□□□□ -0.72
NUMB-223	ENST00000556772	KNSTRN	Q9Y448	316 aa		10.56	□□□□□ -0.72
NUMB-223	ENST00000556772	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.55	□□□□□ -0.72
NUMB-223	ENST00000556772	CYB5RL	Q6IPT4	315 aa		10.54	□□□□□ -0.72
NUMB-223	ENST00000556772	STAG3	Q9UJ98	1225 aa		10.54	□□□□□ -0.72
NUMB-223	ENST00000556772	CARMIL1	Q5VZK9	1371 aa		10.54	□□□□□ -0.72
NUMB-223	ENST00000556772	OSCAR	Q8IYS5	282 aa		10.53	□□□□□ -0.72
NUMB-223	ENST00000556772	CC2D1B	Q5T0F9	858 aa	Known RBP	10.52	□□□□□ -0.72
NUMB-223	ENST00000556772	ARHGAP35	Q9NRY4	1499 aa		10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	PLEKHD1	A6NEE1	506 aa		10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	MYH16	Q9H6N6	1097 aa		10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	GOLGA6L22	H0YM25	854 aa		10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	CDCA8	Q53HL2	280 aa		10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.51	□□□□□ -0.73
NUMB-223	ENST00000556772	WIZ	O95785	1651 aa		10.5	□□□□□ -0.73
NUMB-223	ENST00000556772	CUX2	O14529	1486 aa		10.5	□□□□□ -0.73
NUMB-223	ENST00000556772	IPO9	Q96P70	1041 aa	Known RBP	10.5	□□□□□ -0.73
NUMB-223	ENST00000556772	NEUROD2	Q15784	382 aa		10.49	□□□□□ -0.73
NUMB-223	ENST00000556772	FOXD1	Q16676	465 aa		10.49	□□□□□ -0.73
NUMB-223	ENST00000556772	FRAT1	Q92837	279 aa	Predicted RBP	10.48	□□□□□ -0.73
NUMB-223	ENST00000556772	TCERG1	O14776	1098 aa	Known RBP	10.48	□□□□□ -0.73
NUMB-223	ENST00000556772	RUSC2	Q8N2Y8	1516 aa		10.48	□□□□□ -0.73
NUMB-223	ENST00000556772	FTSJ3	Q8IY81	847 aa	Known RBP	10.48	□□□□□ -0.73
NUMB-223	ENST00000556772	DCAF11	Q8TEB1	546 aa		10.47	□□□□□ -0.73
NUMB-223	ENST00000556772	RCAN3	Q9UKA8	241 aa		10.47	□□□□□ -0.73
NUMB-223	ENST00000556772	NCL	P19338	710 aa	Known RBP	10.47	□□□□□ -0.73
NUMB-223	ENST00000556772	NUDC	Q9Y266	331 aa		10.47	□□□□□ -0.73
NUMB-223	ENST00000556772	RAPGEF2	Q9Y4G8	1499 aa		10.47	□□□□□ -0.73
NUMB-223	ENST00000556772	CFAP53	Q96M91	514 aa		10.46	□□□□□ -0.74
NUMB-223	ENST00000556772	MPHOSPH9	Q99550	1183 aa		10.45	□□□□□ -0.74
NUMB-223	ENST00000556772	TOP2A	P11388	1531 aa	Known RBP	10.45	□□□□□ -0.74
NUMB-223	ENST00000556772	FANCI	Q9NVI1	1328 aa		10.44	□□□□□ -0.74
NUMB-223	ENST00000556772	L3MBTL2	Q969R5	705 aa		10.43	□□□□□ -0.74
NUMB-223	ENST00000556772	TMF1	P82094	1093 aa		10.43	□□□□□ -0.74
NUMB-223	ENST00000556772	L1TD1	Q5T7N2	865 aa	Known RBP	10.42	□□□□□ -0.74
NUMB-223	ENST00000556772	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.42	□□□□□ -0.74
NUMB-223	ENST00000556772	PKD2	Q13563	968 aa		10.41	□□□□□ -0.74
NUMB-223	ENST00000556772	FMN1	Q68DA7	1419 aa		10.41	□□□□□ -0.74
NUMB-223	ENST00000556772	KTN1	Q86UP2	1357 aa	Known RBP	10.41	□□□□□ -0.74
NUMB-223	ENST00000556772	PTMA	P06454	111 aa	Known RBP	10.41	□□□□□ -0.74
NUMB-223	ENST00000556772	RALBP1	Q15311	655 aa		10.4	□□□□□ -0.74
NUMB-223	ENST00000556772	TNNT2	P45379	298 aa	Predicted RBP	10.4	□□□□□ -0.74
NUMB-223	ENST00000556772	SENP3	Q9H4L4	574 aa	Predicted RBP	10.4	□□□□□ -0.75
NUMB-223	ENST00000556772	HSP90AB1	P08238	724 aa	Known RBP	10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms