RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 CUX1P39880 1505 aa18.25■□□□□ 0.51
SRSF5-216ENST00000556647 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
SRSF5-216ENST00000556647 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
SRSF5-216ENST00000556647 NUP160Q12769 1436 aa18.2■□□□□ 0.5
SRSF5-216ENST00000556647 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
SRSF5-216ENST00000556647 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
SRSF5-216ENST00000556647 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
SRSF5-216ENST00000556647 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
SRSF5-216ENST00000556647 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
SRSF5-216ENST00000556647 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
SRSF5-216ENST00000556647 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
SRSF5-216ENST00000556647 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
SRSF5-216ENST00000556647 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
SRSF5-216ENST00000556647 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
SRSF5-216ENST00000556647 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
SRSF5-216ENST00000556647 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
SRSF5-216ENST00000556647 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
SRSF5-216ENST00000556647 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
SRSF5-216ENST00000556647 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
SRSF5-216ENST00000556647 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
SRSF5-216ENST00000556647 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
SRSF5-216ENST00000556647 COL17A1Q9UMD9 1497 aaPredicted RBP17.88■□□□□ 0.45
SRSF5-216ENST00000556647 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
SRSF5-216ENST00000556647 PPRC1Q5VV67 1664 aaKnown RBP17.87■□□□□ 0.45
SRSF5-216ENST00000556647 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
SRSF5-216ENST00000556647 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
SRSF5-216ENST00000556647 SOCS7O14512 581 aa17.81■□□□□ 0.44
SRSF5-216ENST00000556647 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
SRSF5-216ENST00000556647 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
SRSF5-216ENST00000556647 GLI2P10070 1586 aa17.79■□□□□ 0.44
SRSF5-216ENST00000556647 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
SRSF5-216ENST00000556647 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
SRSF5-216ENST00000556647 PTPRGP23470 1445 aa17.77■□□□□ 0.44
SRSF5-216ENST00000556647 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
SRSF5-216ENST00000556647 ABCC2Q92887 1545 aa17.74■□□□□ 0.43
SRSF5-216ENST00000556647 MSH5O43196 834 aa17.74■□□□□ 0.43
SRSF5-216ENST00000556647 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
SRSF5-216ENST00000556647 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
SRSF5-216ENST00000556647 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
SRSF5-216ENST00000556647 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
SRSF5-216ENST00000556647 CUL7Q14999 1698 aa17.68■□□□□ 0.42
SRSF5-216ENST00000556647 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
SRSF5-216ENST00000556647 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
SRSF5-216ENST00000556647 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
SRSF5-216ENST00000556647 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
SRSF5-216ENST00000556647 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
SRSF5-216ENST00000556647 KIF21BO75037 1637 aa17.6■□□□□ 0.41
SRSF5-216ENST00000556647 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
SRSF5-216ENST00000556647 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
SRSF5-216ENST00000556647 PTPRMP28827 1452 aa17.57■□□□□ 0.4
SRSF5-216ENST00000556647 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
SRSF5-216ENST00000556647 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
SRSF5-216ENST00000556647 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
SRSF5-216ENST00000556647 PCF11O94913 1555 aaKnown RBP17.52■□□□□ 0.39
SRSF5-216ENST00000556647 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.39
SRSF5-216ENST00000556647 ZCCHC11Q5TAX3 1644 aaKnown RBP17.5■□□□□ 0.39
SRSF5-216ENST00000556647 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
SRSF5-216ENST00000556647 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
SRSF5-216ENST00000556647 IGF1RP08069 1367 aa17.49■□□□□ 0.39
SRSF5-216ENST00000556647 HSPA2P54652 639 aa17.48■□□□□ 0.39
SRSF5-216ENST00000556647 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
SRSF5-216ENST00000556647 ADAMTSL3P82987 1691 aa17.47■□□□□ 0.39
SRSF5-216ENST00000556647 WDR7Q9Y4E6 1490 aa17.46■□□□□ 0.39
SRSF5-216ENST00000556647 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
SRSF5-216ENST00000556647 ARID4BQ4LE39 1312 aaPredicted RBP17.42■□□□□ 0.38
SRSF5-216ENST00000556647 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
SRSF5-216ENST00000556647 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
SRSF5-216ENST00000556647 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
SRSF5-216ENST00000556647 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
SRSF5-216ENST00000556647 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
SRSF5-216ENST00000556647 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
SRSF5-216ENST00000556647 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
SRSF5-216ENST00000556647 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
SRSF5-216ENST00000556647 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
SRSF5-216ENST00000556647 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
SRSF5-216ENST00000556647 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
SRSF5-216ENST00000556647 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
SRSF5-216ENST00000556647 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
SRSF5-216ENST00000556647 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
SRSF5-216ENST00000556647 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
SRSF5-216ENST00000556647 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
SRSF5-216ENST00000556647 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
SRSF5-216ENST00000556647 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
SRSF5-216ENST00000556647 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
SRSF5-216ENST00000556647 MLECQ14165 292 aa17.15■□□□□ 0.34
SRSF5-216ENST00000556647 ABCA8O94911 1581 aa17.15■□□□□ 0.34
SRSF5-216ENST00000556647 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
SRSF5-216ENST00000556647 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
SRSF5-216ENST00000556647 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
SRSF5-216ENST00000556647 NEO1Q92859 1461 aa17.12■□□□□ 0.33
SRSF5-216ENST00000556647 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
SRSF5-216ENST00000556647 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
SRSF5-216ENST00000556647 STRCQ7RTU9 1775 aa17.08■□□□□ 0.33
SRSF5-216ENST00000556647 FANCAO15360 1455 aa17.08■□□□□ 0.32
SRSF5-216ENST00000556647 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
SRSF5-216ENST00000556647 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
SRSF5-216ENST00000556647 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SRSF5-216ENST00000556647 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
SRSF5-216ENST00000556647 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
SRSF5-216ENST00000556647 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms