RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
ATXN3-238ENST00000556288 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-238ENST00000556288 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
ATXN3-238ENST00000556288 PLEKHG5O94827 1062 aa9.95□□□□□ -0.82
ATXN3-238ENST00000556288 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
ATXN3-238ENST00000556288 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
ATXN3-238ENST00000556288 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-238ENST00000556288 KLHL34Q8N239 644 aa9.92□□□□□ -0.82
ATXN3-238ENST00000556288 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
ATXN3-238ENST00000556288 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-238ENST00000556288 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-238ENST00000556288 ASTLQ6HA08 431 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-238ENST00000556288 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-238ENST00000556288 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-238ENST00000556288 SLC39A7Q92504 469 aa9.81□□□□□ -0.84
ATXN3-238ENST00000556288 SPOCK2Q92563 424 aa9.81□□□□□ -0.84
ATXN3-238ENST00000556288 C7P10643 843 aa9.8□□□□□ -0.84
ATXN3-238ENST00000556288 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
ATXN3-238ENST00000556288 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-238ENST00000556288 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
ATXN3-238ENST00000556288 NPM1P06748 294 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-238ENST00000556288 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
ATXN3-238ENST00000556288 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-238ENST00000556288 CCDC180Q9P1Z9 1646 aa9.71□□□□□ -0.85
ATXN3-238ENST00000556288 NUBP1P53384 320 aa9.7□□□□□ -0.86
ATXN3-238ENST00000556288 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
ATXN3-238ENST00000556288 POTEFA5A3E0 1075 aa9.69□□□□□ -0.86
ATXN3-238ENST00000556288 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-238ENST00000556288 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
ATXN3-238ENST00000556288 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-238ENST00000556288 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
ATXN3-238ENST00000556288 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
ATXN3-238ENST00000556288 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
ATXN3-238ENST00000556288 GSE1Q14687 1217 aa9.63□□□□□ -0.87
ATXN3-238ENST00000556288 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-238ENST00000556288 PKD2Q13563 968 aa9.6□□□□□ -0.87
ATXN3-238ENST00000556288 ABCC9O60706 1549 aa9.58□□□□□ -0.88
ATXN3-238ENST00000556288 BMP2KQ9NSY1 1161 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-238ENST00000556288 TRPC6Q9Y210 931 aa9.57□□□□□ -0.88
ATXN3-238ENST00000556288 CCDC61Q9Y6R9 512 aa9.56□□□□□ -0.88
ATXN3-238ENST00000556288 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-238ENST00000556288 TRIM41Q8WV44 630 aa9.53□□□□□ -0.88
ATXN3-238ENST00000556288 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
ATXN3-238ENST00000556288 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-238ENST00000556288 ST18O60284 1047 aa9.51□□□□□ -0.89
ATXN3-238ENST00000556288 PYGBP11216 843 aa9.51□□□□□ -0.89
ATXN3-238ENST00000556288 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
ATXN3-238ENST00000556288 TIE1P35590 1138 aa9.49□□□□□ -0.89
ATXN3-238ENST00000556288 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-238ENST00000556288 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
ATXN3-238ENST00000556288 RGL2O15211 777 aa9.45□□□□□ -0.9
ATXN3-238ENST00000556288 SEC24BO95487 1268 aa9.45□□□□□ -0.9
ATXN3-238ENST00000556288 MAP3K13O43283 966 aa9.44□□□□□ -0.9
ATXN3-238ENST00000556288 DCAF8L2P0C7V8 631 aa9.44□□□□□ -0.9
ATXN3-238ENST00000556288 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
ATXN3-238ENST00000556288 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
ATXN3-238ENST00000556288 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
ATXN3-238ENST00000556288 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
ATXN3-238ENST00000556288 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-238ENST00000556288 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
ATXN3-238ENST00000556288 IER5LQ5T953 404 aa9.37□□□□□ -0.91
ATXN3-238ENST00000556288 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-238ENST00000556288 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
ATXN3-238ENST00000556288 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
ATXN3-238ENST00000556288 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
ATXN3-238ENST00000556288 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
ATXN3-238ENST00000556288 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-238ENST00000556288 TMEM121BQ9BXQ6 578 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-238ENST00000556288 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
ATXN3-238ENST00000556288 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
ATXN3-238ENST00000556288 PSEN1P49768 467 aa9.28□□□□□ -0.92
ATXN3-238ENST00000556288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-238ENST00000556288 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
ATXN3-238ENST00000556288 ZFP91Q96JP5 570 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-238ENST00000556288 STK25O00506 426 aa9.26□□□□□ -0.93
ATXN3-238ENST00000556288 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-238ENST00000556288 PLCG2P16885 1265 aa9.23□□□□□ -0.93
ATXN3-238ENST00000556288 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
ATXN3-238ENST00000556288 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-238ENST00000556288 HS6ST3Q8IZP7 471 aa9.22□□□□□ -0.93
ATXN3-238ENST00000556288 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
ATXN3-238ENST00000556288 SNPHO15079 494 aa9.2□□□□□ -0.94
ATXN3-238ENST00000556288 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
ATXN3-238ENST00000556288 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
ATXN3-238ENST00000556288 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-238ENST00000556288 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
ATXN3-238ENST00000556288 CABP2Q9NPB3 220 aa9.17□□□□□ -0.94
ATXN3-238ENST00000556288 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
ATXN3-238ENST00000556288 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
ATXN3-238ENST00000556288 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
ATXN3-238ENST00000556288 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-238ENST00000556288 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
ATXN3-238ENST00000556288 EMP3P54852 163 aa9.12□□□□□ -0.95
ATXN3-238ENST00000556288 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
ATXN3-238ENST00000556288 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
ATXN3-238ENST00000556288 NACADO15069 1562 aa9.12□□□□□ -0.95
ATXN3-238ENST00000556288 MKRN3Q13064 507 aaKnown RBP9.11□□□□□ -0.95
ATXN3-238ENST00000556288 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
ATXN3-238ENST00000556288 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
ATXN3-238ENST00000556288 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms