RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
NEK9-206ENST00000555537 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
NEK9-206ENST00000555537 ABCC10Q5T3U5 1492 aa15.12■□□□□ 0.01
NEK9-206ENST00000555537 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
NEK9-206ENST00000555537 DIP2BQ9P265 1576 aa15.05■□□□□ -0
NEK9-206ENST00000555537 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
NEK9-206ENST00000555537 MAPKBP1O60336 1514 aa15.04■□□□□ -0
NEK9-206ENST00000555537 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
NEK9-206ENST00000555537 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
NEK9-206ENST00000555537 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
NEK9-206ENST00000555537 TSPOAP1O95153 1857 aa15.03■□□□□ -0
NEK9-206ENST00000555537 KDM6BO15054 1643 aa15.03■□□□□ -0
NEK9-206ENST00000555537 KIAA0586Q9BVV6 1533 aa14.96□□□□□ -0.02
NEK9-206ENST00000555537 IGF1RP08069 1367 aa14.96□□□□□ -0.02
NEK9-206ENST00000555537 PTPRGP23470 1445 aa14.93□□□□□ -0.02
NEK9-206ENST00000555537 ASXL2Q76L83 1435 aa14.87□□□□□ -0.03
NEK9-206ENST00000555537 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
NEK9-206ENST00000555537 ADGRL1O94910 1474 aa14.85□□□□□ -0.03
NEK9-206ENST00000555537 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
NEK9-206ENST00000555537 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
NEK9-206ENST00000555537 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
NEK9-206ENST00000555537 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
NEK9-206ENST00000555537 PPRC1Q5VV67 1664 aaKnown RBP14.84□□□□□ -0.03
NEK9-206ENST00000555537 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
NEK9-206ENST00000555537 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
NEK9-206ENST00000555537 CUL7Q14999 1698 aa14.81□□□□□ -0.04
NEK9-206ENST00000555537 GLI2P10070 1586 aa14.8□□□□□ -0.04
NEK9-206ENST00000555537 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
NEK9-206ENST00000555537 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
NEK9-206ENST00000555537 UHRF1BP1LA0JNW5 1464 aa14.76□□□□□ -0.05
NEK9-206ENST00000555537 HECW2Q9P2P5 1572 aa14.75□□□□□ -0.05
NEK9-206ENST00000555537 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
NEK9-206ENST00000555537 DISP1Q96F81 1524 aa14.74□□□□□ -0.05
NEK9-206ENST00000555537 MAP3K4Q9Y6R4 1608 aa14.72□□□□□ -0.05
NEK9-206ENST00000555537 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
NEK9-206ENST00000555537 KCNH8Q96L42 1107 aa14.69□□□□□ -0.06
NEK9-206ENST00000555537 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
NEK9-206ENST00000555537 TEX14Q8IWB6 1497 aa14.69□□□□□ -0.06
NEK9-206ENST00000555537 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
NEK9-206ENST00000555537 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
NEK9-206ENST00000555537 CD109Q6YHK3 1445 aa14.62□□□□□ -0.07
NEK9-206ENST00000555537 KIAA0556O60303 1618 aa14.62□□□□□ -0.07
NEK9-206ENST00000555537 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
NEK9-206ENST00000555537 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
NEK9-206ENST00000555537 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
NEK9-206ENST00000555537 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
NEK9-206ENST00000555537 KIF21BO75037 1637 aa14.55□□□□□ -0.08
NEK9-206ENST00000555537 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
NEK9-206ENST00000555537 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
NEK9-206ENST00000555537 ABCA8O94911 1581 aa14.51□□□□□ -0.09
NEK9-206ENST00000555537 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
NEK9-206ENST00000555537 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
NEK9-206ENST00000555537 ARAP3Q8WWN8 1544 aa14.47□□□□□ -0.09
NEK9-206ENST00000555537 PTPRMP28827 1452 aa14.47□□□□□ -0.09
NEK9-206ENST00000555537 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.09
NEK9-206ENST00000555537 ATP10BO94823 1461 aa14.45□□□□□ -0.1
NEK9-206ENST00000555537 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
NEK9-206ENST00000555537 ADAMTSL3P82987 1691 aa14.43□□□□□ -0.1
NEK9-206ENST00000555537 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
NEK9-206ENST00000555537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
NEK9-206ENST00000555537 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
NEK9-206ENST00000555537 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
NEK9-206ENST00000555537 HSPA2P54652 639 aa14.39□□□□□ -0.11
NEK9-206ENST00000555537 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
NEK9-206ENST00000555537 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
NEK9-206ENST00000555537 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
NEK9-206ENST00000555537 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
NEK9-206ENST00000555537 BCORL1Q5H9F3 1711 aa14.36□□□□□ -0.11
NEK9-206ENST00000555537 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
NEK9-206ENST00000555537 LMTK3Q96Q04 1460 aa14.36□□□□□ -0.11
NEK9-206ENST00000555537 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
NEK9-206ENST00000555537 NEO1Q92859 1461 aa14.34□□□□□ -0.11
NEK9-206ENST00000555537 FRMPD1Q5SYB0 1578 aa14.34□□□□□ -0.11
NEK9-206ENST00000555537 RIMS1Q86UR5 1692 aaKnown RBP14.31□□□□□ -0.12
NEK9-206ENST00000555537 MLECQ14165 292 aa14.31□□□□□ -0.12
NEK9-206ENST00000555537 CERKQ8TCT0 537 aa14.29□□□□□ -0.12
NEK9-206ENST00000555537 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
NEK9-206ENST00000555537 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
NEK9-206ENST00000555537 DENND4BO75064 1496 aaPredicted RBP14.27□□□□□ -0.12
NEK9-206ENST00000555537 AKNAQ7Z591 1439 aa14.27□□□□□ -0.12
NEK9-206ENST00000555537 NUP153P49790 1475 aaKnown RBP14.26□□□□□ -0.13
NEK9-206ENST00000555537 CSRNP3Q8WYN3 585 aa14.26□□□□□ -0.13
NEK9-206ENST00000555537 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
NEK9-206ENST00000555537 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
NEK9-206ENST00000555537 ARHGEF40Q8TER5 1519 aa14.24□□□□□ -0.13
NEK9-206ENST00000555537 RICTORQ6R327 1708 aa14.24□□□□□ -0.13
NEK9-206ENST00000555537 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
NEK9-206ENST00000555537 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
NEK9-206ENST00000555537 FANCAO15360 1455 aa14.23□□□□□ -0.13
NEK9-206ENST00000555537 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
NEK9-206ENST00000555537 CEBPAP49715 358 aaPredicted RBP14.21□□□□□ -0.13
NEK9-206ENST00000555537 POGZQ7Z3K3 1410 aa14.21□□□□□ -0.13
NEK9-206ENST00000555537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
NEK9-206ENST00000555537 ZFYVE16Q7Z3T8 1539 aa14.19□□□□□ -0.14
NEK9-206ENST00000555537 DISP3Q9P2K9 1392 aa14.18□□□□□ -0.14
NEK9-206ENST00000555537 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
NEK9-206ENST00000555537 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
NEK9-206ENST00000555537 HECW1Q76N89 1606 aa14.16□□□□□ -0.14
NEK9-206ENST00000555537 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
NEK9-206ENST00000555537 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms