RNA–Protein interactions for RNA: ENST00000555364.5

LINC01580-202, Transcript of long intergenic non-protein coding RNA 1580, humanhuman

TSL 1 (best) BASIC

Gene LINC01580, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01580-202ENST00000555364 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
LINC01580-202ENST00000555364 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.54
LINC01580-202ENST00000555364 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
LINC01580-202ENST00000555364 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
LINC01580-202ENST00000555364 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
LINC01580-202ENST00000555364 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
LINC01580-202ENST00000555364 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
LINC01580-202ENST00000555364 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
LINC01580-202ENST00000555364 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
LINC01580-202ENST00000555364 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
LINC01580-202ENST00000555364 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
LINC01580-202ENST00000555364 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
LINC01580-202ENST00000555364 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
LINC01580-202ENST00000555364 CUX2O14529 1486 aa11.57□□□□□ -0.56
LINC01580-202ENST00000555364 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
LINC01580-202ENST00000555364 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
LINC01580-202ENST00000555364 PROM2Q8N271 834 aa11.55□□□□□ -0.56
LINC01580-202ENST00000555364 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
LINC01580-202ENST00000555364 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
LINC01580-202ENST00000555364 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
LINC01580-202ENST00000555364 WIZO95785 1651 aa11.49□□□□□ -0.57
LINC01580-202ENST00000555364 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
LINC01580-202ENST00000555364 FKBP8Q14318 412 aa11.48□□□□□ -0.57
LINC01580-202ENST00000555364 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
LINC01580-202ENST00000555364 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01580-202ENST00000555364 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
LINC01580-202ENST00000555364 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
LINC01580-202ENST00000555364 POTEMA6NI47 508 aa11.41□□□□□ -0.58
LINC01580-202ENST00000555364 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
LINC01580-202ENST00000555364 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
LINC01580-202ENST00000555364 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
LINC01580-202ENST00000555364 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
LINC01580-202ENST00000555364 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
LINC01580-202ENST00000555364 MIER1Q8N108 512 aa11.36□□□□□ -0.59
LINC01580-202ENST00000555364 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
LINC01580-202ENST00000555364 NESP48681 1621 aa11.35□□□□□ -0.59
LINC01580-202ENST00000555364 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
LINC01580-202ENST00000555364 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
LINC01580-202ENST00000555364 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
LINC01580-202ENST00000555364 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
LINC01580-202ENST00000555364 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
LINC01580-202ENST00000555364 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
LINC01580-202ENST00000555364 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
LINC01580-202ENST00000555364 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
LINC01580-202ENST00000555364 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
LINC01580-202ENST00000555364 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
LINC01580-202ENST00000555364 CFTRP13569 1480 aa11.24□□□□□ -0.61
LINC01580-202ENST00000555364 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
LINC01580-202ENST00000555364 C7P10643 843 aa11.23□□□□□ -0.61
LINC01580-202ENST00000555364 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
LINC01580-202ENST00000555364 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
LINC01580-202ENST00000555364 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
LINC01580-202ENST00000555364 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
LINC01580-202ENST00000555364 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
LINC01580-202ENST00000555364 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
LINC01580-202ENST00000555364 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
LINC01580-202ENST00000555364 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
LINC01580-202ENST00000555364 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
LINC01580-202ENST00000555364 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
LINC01580-202ENST00000555364 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
LINC01580-202ENST00000555364 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
LINC01580-202ENST00000555364 WDR62O43379 1518 aa11.14□□□□□ -0.63
LINC01580-202ENST00000555364 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
LINC01580-202ENST00000555364 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
LINC01580-202ENST00000555364 ATN1P54259 1190 aaPredicted RBP11.11□□□□□ -0.63
LINC01580-202ENST00000555364 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
LINC01580-202ENST00000555364 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
LINC01580-202ENST00000555364 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
LINC01580-202ENST00000555364 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
LINC01580-202ENST00000555364 NUBP1P53384 320 aa11.06□□□□□ -0.64
LINC01580-202ENST00000555364 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
LINC01580-202ENST00000555364 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
LINC01580-202ENST00000555364 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
LINC01580-202ENST00000555364 MAP3K13O43283 966 aa11.02□□□□□ -0.65
LINC01580-202ENST00000555364 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
LINC01580-202ENST00000555364 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
LINC01580-202ENST00000555364 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
LINC01580-202ENST00000555364 TOPBP1Q92547 1522 aa11□□□□□ -0.65
LINC01580-202ENST00000555364 ABCC8Q09428 1581 aa11□□□□□ -0.65
LINC01580-202ENST00000555364 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
LINC01580-202ENST00000555364 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
LINC01580-202ENST00000555364 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
LINC01580-202ENST00000555364 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
LINC01580-202ENST00000555364 TIE1P35590 1138 aa10.94□□□□□ -0.66
LINC01580-202ENST00000555364 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
LINC01580-202ENST00000555364 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
LINC01580-202ENST00000555364 CUX1P39880 1505 aa10.91□□□□□ -0.66
LINC01580-202ENST00000555364 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.66
LINC01580-202ENST00000555364 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
LINC01580-202ENST00000555364 CDAN1Q8IWY9 1227 aa10.89□□□□□ -0.67
LINC01580-202ENST00000555364 RIMBP3CA6NJZ7 1639 aa10.88□□□□□ -0.67
LINC01580-202ENST00000555364 RIMBP3BA6NNM3 1639 aa10.88□□□□□ -0.67
LINC01580-202ENST00000555364 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
LINC01580-202ENST00000555364 RIMBP3Q9UFD9 1639 aa10.88□□□□□ -0.67
LINC01580-202ENST00000555364 SEC24BO95487 1268 aa10.88□□□□□ -0.67
LINC01580-202ENST00000555364 PYGBP11216 843 aa10.88□□□□□ -0.67
LINC01580-202ENST00000555364 ZNF608Q9ULD9 1512 aaPredicted RBP10.88□□□□□ -0.67
LINC01580-202ENST00000555364 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
LINC01580-202ENST00000555364 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
LINC01580-202ENST00000555364 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms