RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
ATXN3-231ENST00000554994 POTEMA6NI47 508 aa10.32□□□□□ -0.76
ATXN3-231ENST00000554994 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
ATXN3-231ENST00000554994 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-231ENST00000554994 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
ATXN3-231ENST00000554994 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-231ENST00000554994 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-231ENST00000554994 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
ATXN3-231ENST00000554994 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
ATXN3-231ENST00000554994 C7P10643 843 aa10.24□□□□□ -0.77
ATXN3-231ENST00000554994 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
ATXN3-231ENST00000554994 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-231ENST00000554994 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
ATXN3-231ENST00000554994 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
ATXN3-231ENST00000554994 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-231ENST00000554994 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
ATXN3-231ENST00000554994 SCUBE2Q9NQ36 999 aa10.15□□□□□ -0.78
ATXN3-231ENST00000554994 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
ATXN3-231ENST00000554994 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
ATXN3-231ENST00000554994 MIER1Q8N108 512 aa10.13□□□□□ -0.79
ATXN3-231ENST00000554994 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-231ENST00000554994 MAP3K13O43283 966 aa10.11□□□□□ -0.79
ATXN3-231ENST00000554994 PROM2Q8N271 834 aa10.11□□□□□ -0.79
ATXN3-231ENST00000554994 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
ATXN3-231ENST00000554994 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
ATXN3-231ENST00000554994 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
ATXN3-231ENST00000554994 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-231ENST00000554994 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
ATXN3-231ENST00000554994 SEC24BO95487 1268 aa10.06□□□□□ -0.8
ATXN3-231ENST00000554994 TIE1P35590 1138 aa10.05□□□□□ -0.8
ATXN3-231ENST00000554994 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.8
ATXN3-231ENST00000554994 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
ATXN3-231ENST00000554994 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-231ENST00000554994 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
ATXN3-231ENST00000554994 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
ATXN3-231ENST00000554994 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
ATXN3-231ENST00000554994 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
ATXN3-231ENST00000554994 NACADO15069 1562 aa9.99□□□□□ -0.81
ATXN3-231ENST00000554994 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
ATXN3-231ENST00000554994 DCAF8L2P0C7V8 631 aa9.96□□□□□ -0.82
ATXN3-231ENST00000554994 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
ATXN3-231ENST00000554994 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
ATXN3-231ENST00000554994 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
ATXN3-231ENST00000554994 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
ATXN3-231ENST00000554994 IER5LQ5T953 404 aa9.89□□□□□ -0.83
ATXN3-231ENST00000554994 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
ATXN3-231ENST00000554994 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
ATXN3-231ENST00000554994 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-231ENST00000554994 NUBP1P53384 320 aa9.87□□□□□ -0.83
ATXN3-231ENST00000554994 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
ATXN3-231ENST00000554994 PLCG2P16885 1265 aa9.85□□□□□ -0.83
ATXN3-231ENST00000554994 ST18O60284 1047 aa9.83□□□□□ -0.84
ATXN3-231ENST00000554994 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
ATXN3-231ENST00000554994 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
ATXN3-231ENST00000554994 PYGBP11216 843 aa9.78□□□□□ -0.84
ATXN3-231ENST00000554994 CUX2O14529 1486 aa9.78□□□□□ -0.84
ATXN3-231ENST00000554994 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-231ENST00000554994 FKBP8Q14318 412 aa9.75□□□□□ -0.85
ATXN3-231ENST00000554994 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
ATXN3-231ENST00000554994 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
ATXN3-231ENST00000554994 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
ATXN3-231ENST00000554994 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
ATXN3-231ENST00000554994 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
ATXN3-231ENST00000554994 SNPHO15079 494 aa9.67□□□□□ -0.86
ATXN3-231ENST00000554994 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
ATXN3-231ENST00000554994 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
ATXN3-231ENST00000554994 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
ATXN3-231ENST00000554994 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
ATXN3-231ENST00000554994 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-231ENST00000554994 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
ATXN3-231ENST00000554994 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
ATXN3-231ENST00000554994 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
ATXN3-231ENST00000554994 MYO15BQ96JP2 1530 aa9.58□□□□□ -0.88
ATXN3-231ENST00000554994 EMP3P54852 163 aa9.58□□□□□ -0.88
ATXN3-231ENST00000554994 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
ATXN3-231ENST00000554994 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
ATXN3-231ENST00000554994 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
ATXN3-231ENST00000554994 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-231ENST00000554994 GSE1Q14687 1217 aa9.55□□□□□ -0.88
ATXN3-231ENST00000554994 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-231ENST00000554994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■□□□ 13.5
ATXN3-231ENST00000554994 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
ATXN3-231ENST00000554994 PSEN1P49768 467 aa9.52□□□□□ -0.89
ATXN3-231ENST00000554994 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
ATXN3-231ENST00000554994 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-231ENST00000554994 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
ATXN3-231ENST00000554994 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
ATXN3-231ENST00000554994 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
ATXN3-231ENST00000554994 G3V3G9 751 aa9.46□□□□□ -0.9
ATXN3-231ENST00000554994 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
ATXN3-231ENST00000554994 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
ATXN3-231ENST00000554994 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
ATXN3-231ENST00000554994 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-231ENST00000554994 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
ATXN3-231ENST00000554994 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-231ENST00000554994 NESP48681 1621 aa9.42□□□□□ -0.9
ATXN3-231ENST00000554994 ZNF710Q8N1W2 664 aa9.39□□□□□ -0.91
ATXN3-231ENST00000554994 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
ATXN3-231ENST00000554994 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
ATXN3-231ENST00000554994 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 604.7 ms