RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MAPKBP1O60336 1514 aa31.38■■■□□ 2.61
NEK9-204ENST00000554258 PRG4Q92954 1404 aaPredicted RBP31.35■■■□□ 2.61
NEK9-204ENST00000554258 HECW2Q9P2P5 1572 aa31.26■■■□□ 2.59
NEK9-204ENST00000554258 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
NEK9-204ENST00000554258 ADGRL1O94910 1474 aa31.23■■■□□ 2.59
NEK9-204ENST00000554258 JPH4Q96JJ6 628 aa31.2■■■□□ 2.59
NEK9-204ENST00000554258 ADCY10Q96PN6 1610 aa31.19■■■□□ 2.58
NEK9-204ENST00000554258 WRNQ14191 1432 aaPredicted RBP eCLIP31.09■■■□□ 2.57
NEK9-204ENST00000554258 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
NEK9-204ENST00000554258 FBXO41Q8TF61 875 aa31.03■■■□□ 2.56
NEK9-204ENST00000554258 RUSC2Q8N2Y8 1516 aa31.01■■■□□ 2.55
NEK9-204ENST00000554258 PPRC1Q5VV67 1664 aaKnown RBP30.91■■■□□ 2.54
NEK9-204ENST00000554258 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
NEK9-204ENST00000554258 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
NEK9-204ENST00000554258 GLI2P10070 1586 aa30.79■■■□□ 2.52
NEK9-204ENST00000554258 COL17A1Q9UMD9 1497 aaPredicted RBP30.76■■■□□ 2.52
NEK9-204ENST00000554258 ASXL2Q76L83 1435 aa30.73■■■□□ 2.51
NEK9-204ENST00000554258 PLB1Q6P1J6 1458 aa30.73■■■□□ 2.51
NEK9-204ENST00000554258 ABCC2Q92887 1545 aa30.7■■■□□ 2.51
NEK9-204ENST00000554258 KIAA0586Q9BVV6 1533 aa30.68■■■□□ 2.5
NEK9-204ENST00000554258 PTPRGP23470 1445 aa30.68■■■□□ 2.5
NEK9-204ENST00000554258 TTBK1Q5TCY1 1321 aaPredicted RBP30.66■■■□□ 2.5
NEK9-204ENST00000554258 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.5
NEK9-204ENST00000554258 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
NEK9-204ENST00000554258 CUL7Q14999 1698 aa30.62■■■□□ 2.49
NEK9-204ENST00000554258 MAP3K4Q9Y6R4 1608 aa30.61■■■□□ 2.49
NEK9-204ENST00000554258 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
NEK9-204ENST00000554258 TNIKQ9UKE5 1360 aa30.51■■■□□ 2.47
NEK9-204ENST00000554258 UHRF1BP1LA0JNW5 1464 aa30.46■■■□□ 2.47
NEK9-204ENST00000554258 CARMIL2Q6F5E8 1435 aa30.46■■■□□ 2.47
NEK9-204ENST00000554258 UACAQ9BZF9 1416 aa30.39■■■□□ 2.46
NEK9-204ENST00000554258 KIF21BO75037 1637 aa30.38■■■□□ 2.45
NEK9-204ENST00000554258 KDM5BQ9UGL1 1544 aa30.34■■■□□ 2.45
NEK9-204ENST00000554258 SOCS7O14512 581 aa30.33■■■□□ 2.45
NEK9-204ENST00000554258 ZCCHC11Q5TAX3 1644 aaKnown RBP30.33■■■□□ 2.45
NEK9-204ENST00000554258 IGF1RP08069 1367 aa30.3■■■□□ 2.44
NEK9-204ENST00000554258 ILDR2Q71H61 639 aa30.26■■■□□ 2.43
NEK9-204ENST00000554258 PTPRMP28827 1452 aa30.25■■■□□ 2.43
NEK9-204ENST00000554258 IQGAP2Q13576 1575 aa30.23■■■□□ 2.43
NEK9-204ENST00000554258 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
NEK9-204ENST00000554258 WDR7Q9Y4E6 1490 aa30.21■■■□□ 2.43
NEK9-204ENST00000554258 PCF11O94913 1555 aaKnown RBP30.2■■■□□ 2.42
NEK9-204ENST00000554258 MAGI3Q5TCQ9 1506 aa30.19■■■□□ 2.42
NEK9-204ENST00000554258 CD109Q6YHK3 1445 aa30.18■■■□□ 2.42
NEK9-204ENST00000554258 ADAMTSL3P82987 1691 aa30.17■■■□□ 2.42
NEK9-204ENST00000554258 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
NEK9-204ENST00000554258 KIF27Q86VH2 1401 aa30.17■■■□□ 2.42
NEK9-204ENST00000554258 DISP1Q96F81 1524 aa30.15■■■□□ 2.42
NEK9-204ENST00000554258 CARMIL1Q5VZK9 1371 aa30.09■■■□□ 2.41
NEK9-204ENST00000554258 CERKQ8TCT0 537 aa30.07■■■□□ 2.4
NEK9-204ENST00000554258 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
NEK9-204ENST00000554258 KCNH8Q96L42 1107 aa30.04■■■□□ 2.4
NEK9-204ENST00000554258 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
NEK9-204ENST00000554258 MADDQ8WXG6 1647 aa30■■■□□ 2.39
NEK9-204ENST00000554258 BCORL1Q5H9F3 1711 aa29.98■■■□□ 2.39
NEK9-204ENST00000554258 KIAA0556O60303 1618 aa29.97■■■□□ 2.39
NEK9-204ENST00000554258 UGGT2Q9NYU1 1516 aa29.96■■■□□ 2.39
NEK9-204ENST00000554258 HSPA2P54652 639 aa29.94■■■□□ 2.38
NEK9-204ENST00000554258 ARID4BQ4LE39 1312 aaPredicted RBP29.91■■■□□ 2.38
NEK9-204ENST00000554258 SPATA31D1Q6ZQQ2 1576 aa29.9■■■□□ 2.38
NEK9-204ENST00000554258 RIMS1Q86UR5 1692 aaKnown RBP29.88■■■□□ 2.37
NEK9-204ENST00000554258 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
NEK9-204ENST00000554258 PHLDB1Q86UU1 1377 aa29.78■■■□□ 2.36
NEK9-204ENST00000554258 ABCA8O94911 1581 aa29.77■■■□□ 2.36
NEK9-204ENST00000554258 PLPPR3Q6T4P5 718 aa29.76■■■□□ 2.35
NEK9-204ENST00000554258 FRMPD1Q5SYB0 1578 aa29.68■■■□□ 2.34
NEK9-204ENST00000554258 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
NEK9-204ENST00000554258 ABCA9Q8IUA7 1624 aa29.67■■■□□ 2.34
NEK9-204ENST00000554258 NEO1Q92859 1461 aa29.64■■■□□ 2.34
NEK9-204ENST00000554258 ARHGEF40Q8TER5 1519 aa29.63■■■□□ 2.33
NEK9-204ENST00000554258 GOLGA3Q08378 1498 aa29.62■■■□□ 2.33
NEK9-204ENST00000554258 ARID3CA6NKF2 412 aa29.58■■■□□ 2.33
NEK9-204ENST00000554258 CTTNBP2Q8WZ74 1663 aa29.57■■■□□ 2.32
NEK9-204ENST00000554258 POGZQ7Z3K3 1410 aa29.57■■■□□ 2.32
NEK9-204ENST00000554258 FANCAO15360 1455 aa29.53■■■□□ 2.32
NEK9-204ENST00000554258 ATP10BO94823 1461 aa29.5■■■□□ 2.31
NEK9-204ENST00000554258 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
NEK9-204ENST00000554258 DMRT2Q9Y5R5 561 aa29.5■■■□□ 2.31
NEK9-204ENST00000554258 YEATS2Q9ULM3 1422 aa29.48■■■□□ 2.31
NEK9-204ENST00000554258 PREX1Q8TCU6 1659 aa29.48■■■□□ 2.31
NEK9-204ENST00000554258 RICTORQ6R327 1708 aa29.48■■■□□ 2.31
NEK9-204ENST00000554258 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
NEK9-204ENST00000554258 TTC37Q6PGP7 1564 aa29.46■■■□□ 2.31
NEK9-204ENST00000554258 AKNAQ7Z591 1439 aa29.45■■■□□ 2.31
NEK9-204ENST00000554258 DENND4BO75064 1496 aaPredicted RBP29.44■■■□□ 2.3
NEK9-204ENST00000554258 SIGLEC1Q9BZZ2 1709 aa29.43■■■□□ 2.3
NEK9-204ENST00000554258 FAM9AQ8IZU1 332 aaPredicted RBP29.43■■■□□ 2.3
NEK9-204ENST00000554258 MLECQ14165 292 aa29.42■■■□□ 2.3
NEK9-204ENST00000554258 FHOD3Q2V2M9 1422 aa29.37■■■□□ 2.29
NEK9-204ENST00000554258 ZFYVE16Q7Z3T8 1539 aa29.36■■■□□ 2.29
NEK9-204ENST00000554258 EFCAB5A4FU69 1503 aa29.35■■■□□ 2.29
NEK9-204ENST00000554258 ZMYM4Q5VZL5 1548 aa29.33■■■□□ 2.29
NEK9-204ENST00000554258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.3■■■□□ 2.28
NEK9-204ENST00000554258 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
NEK9-204ENST00000554258 CFAP74Q9C0B2 1584 aa29.29■■■□□ 2.28
NEK9-204ENST00000554258 IQSEC2Q5JU85 1478 aa29.27■■■□□ 2.28
NEK9-204ENST00000554258 PTPRTO14522 1441 aa29.26■■■□□ 2.27
NEK9-204ENST00000554258 UHRF1BP1Q6BDS2 1440 aa29.26■■■□□ 2.27
NEK9-204ENST00000554258 SETD1BQ9UPS6 1966 aaKnown RBP29.26■■■□□ 2.27
NEK9-204ENST00000554258 CEBPAP49715 358 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms