RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
LINC02407-202ENST00000553247 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
LINC02407-202ENST00000553247 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
LINC02407-202ENST00000553247 C7P10643 843 aa16.47■□□□□ 0.23
LINC02407-202ENST00000553247 SLC39A7Q92504 469 aa16.46■□□□□ 0.23
LINC02407-202ENST00000553247 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
LINC02407-202ENST00000553247 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
LINC02407-202ENST00000553247 ASTLQ6HA08 431 aaPredicted RBP16.37■□□□□ 0.21
LINC02407-202ENST00000553247 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
LINC02407-202ENST00000553247 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
LINC02407-202ENST00000553247 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
LINC02407-202ENST00000553247 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
LINC02407-202ENST00000553247 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
LINC02407-202ENST00000553247 SPNS2Q8IVW8 549 aa16.21■□□□□ 0.19
LINC02407-202ENST00000553247 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
LINC02407-202ENST00000553247 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
LINC02407-202ENST00000553247 MS4A3Q96HJ5 214 aa16.11■□□□□ 0.17
LINC02407-202ENST00000553247 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
LINC02407-202ENST00000553247 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
LINC02407-202ENST00000553247 POTEFA5A3E0 1075 aa16■□□□□ 0.15
LINC02407-202ENST00000553247 ST18O60284 1047 aa16■□□□□ 0.15
LINC02407-202ENST00000553247 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
LINC02407-202ENST00000553247 ZBTB22O15209 634 aa15.93■□□□□ 0.14
LINC02407-202ENST00000553247 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC02407-202ENST00000553247 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
LINC02407-202ENST00000553247 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
LINC02407-202ENST00000553247 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 SEC24BO95487 1268 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.12
LINC02407-202ENST00000553247 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
LINC02407-202ENST00000553247 COLQQ9Y215 455 aaPredicted RBP15.74■□□□□ 0.11
LINC02407-202ENST00000553247 TMEM121BQ9BXQ6 578 aaPredicted RBP15.73■□□□□ 0.11
LINC02407-202ENST00000553247 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
LINC02407-202ENST00000553247 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
LINC02407-202ENST00000553247 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
LINC02407-202ENST00000553247 TIE1P35590 1138 aa15.61■□□□□ 0.09
LINC02407-202ENST00000553247 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
LINC02407-202ENST00000553247 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
LINC02407-202ENST00000553247 MARVELD3Q96A59 401 aa15.56■□□□□ 0.08
LINC02407-202ENST00000553247 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
LINC02407-202ENST00000553247 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
LINC02407-202ENST00000553247 IER5LQ5T953 404 aa15.51■□□□□ 0.07
LINC02407-202ENST00000553247 SNPHO15079 494 aa15.5■□□□□ 0.07
LINC02407-202ENST00000553247 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
LINC02407-202ENST00000553247 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
LINC02407-202ENST00000553247 KRTAP3-3Q9BYR6 98 aa15.43■□□□□ 0.06
LINC02407-202ENST00000553247 KRTAP3-2Q9BYR7 98 aa15.43■□□□□ 0.06
LINC02407-202ENST00000553247 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
LINC02407-202ENST00000553247 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
LINC02407-202ENST00000553247 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
LINC02407-202ENST00000553247 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
LINC02407-202ENST00000553247 MAP3K13O43283 966 aa15.38■□□□□ 0.05
LINC02407-202ENST00000553247 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
LINC02407-202ENST00000553247 EMP3P54852 163 aa15.33■□□□□ 0.04
LINC02407-202ENST00000553247 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
LINC02407-202ENST00000553247 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
LINC02407-202ENST00000553247 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
LINC02407-202ENST00000553247 PLCG2P16885 1265 aa15.27■□□□□ 0.04
LINC02407-202ENST00000553247 HS3ST6Q96QI5 342 aa15.27■□□□□ 0.04
LINC02407-202ENST00000553247 POTEB3A0JP26 581 aa15.24■□□□□ 0.03
LINC02407-202ENST00000553247 POTEBQ6S5H4 581 aa15.24■□□□□ 0.03
LINC02407-202ENST00000553247 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
LINC02407-202ENST00000553247 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
LINC02407-202ENST00000553247 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
LINC02407-202ENST00000553247 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
LINC02407-202ENST00000553247 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
LINC02407-202ENST00000553247 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
LINC02407-202ENST00000553247 SGIP1Q9BQI5 828 aa15.08■□□□□ 0
LINC02407-202ENST00000553247 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 NESP48681 1621 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 WIZO95785 1651 aa15.06■□□□□ 0
LINC02407-202ENST00000553247 ERCC6Q03468 1493 aa15.03■□□□□ -0
LINC02407-202ENST00000553247 OCEL1Q9H607 264 aa15.02■□□□□ -0
LINC02407-202ENST00000553247 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
LINC02407-202ENST00000553247 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
LINC02407-202ENST00000553247 CUX2O14529 1486 aa15.01□□□□□ -0.01
LINC02407-202ENST00000553247 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
LINC02407-202ENST00000553247 TMEM106CQ9BVX2 250 aa14.99□□□□□ -0.01
LINC02407-202ENST00000553247 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
LINC02407-202ENST00000553247 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
LINC02407-202ENST00000553247 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
LINC02407-202ENST00000553247 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
LINC02407-202ENST00000553247 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
LINC02407-202ENST00000553247 CFTRP13569 1480 aa14.86□□□□□ -0.03
LINC02407-202ENST00000553247 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
LINC02407-202ENST00000553247 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
LINC02407-202ENST00000553247 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
LINC02407-202ENST00000553247 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
LINC02407-202ENST00000553247 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
LINC02407-202ENST00000553247 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
LINC02407-202ENST00000553247 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LINC02407-202ENST00000553247 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
LINC02407-202ENST00000553247 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
LINC02407-202ENST00000553247 WDR62O43379 1518 aa14.71□□□□□ -0.05
LINC02407-202ENST00000553247 ERBB3P21860 1342 aa14.71□□□□□ -0.05
LINC02407-202ENST00000553247 PTGER2P43116 358 aa14.69□□□□□ -0.06
LINC02407-202ENST00000553247 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
LINC02407-202ENST00000553247 HOXB1P14653 301 aaPredicted RBP14.64□□□□□ -0.07
LINC02407-202ENST00000553247 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
LINC02407-202ENST00000553247 PDCD7Q8N8D1 485 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms