RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
RAB5B-210ENST00000553116 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
RAB5B-210ENST00000553116 HRCP23327 699 aa12.69□□□□□ -0.38
RAB5B-210ENST00000553116 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
RAB5B-210ENST00000553116 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
RAB5B-210ENST00000553116 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
RAB5B-210ENST00000553116 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-210ENST00000553116 FHOD3Q2V2M9 1422 aa12.64□□□□□ -0.39
RAB5B-210ENST00000553116 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
RAB5B-210ENST00000553116 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
RAB5B-210ENST00000553116 FBLN2P98095 1184 aa12.61□□□□□ -0.39
RAB5B-210ENST00000553116 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
RAB5B-210ENST00000553116 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-210ENST00000553116 PCF11O94913 1555 aaKnown RBP12.58□□□□□ -0.4
RAB5B-210ENST00000553116 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
RAB5B-210ENST00000553116 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
RAB5B-210ENST00000553116 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
RAB5B-210ENST00000553116 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
RAB5B-210ENST00000553116 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
RAB5B-210ENST00000553116 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
RAB5B-210ENST00000553116 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
RAB5B-210ENST00000553116 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
RAB5B-210ENST00000553116 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
RAB5B-210ENST00000553116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-210ENST00000553116 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
RAB5B-210ENST00000553116 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
RAB5B-210ENST00000553116 CFAP43Q8NDM7 1665 aa12.5□□□□□ -0.41
RAB5B-210ENST00000553116 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
RAB5B-210ENST00000553116 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
RAB5B-210ENST00000553116 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-210ENST00000553116 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
RAB5B-210ENST00000553116 CEP170Q5SW79 1584 aa12.46□□□□□ -0.41
RAB5B-210ENST00000553116 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.42
RAB5B-210ENST00000553116 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
RAB5B-210ENST00000553116 ITGAEP38570 1179 aa12.44□□□□□ -0.42
RAB5B-210ENST00000553116 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
RAB5B-210ENST00000553116 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
RAB5B-210ENST00000553116 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
RAB5B-210ENST00000553116 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
RAB5B-210ENST00000553116 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
RAB5B-210ENST00000553116 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
RAB5B-210ENST00000553116 NUP160Q12769 1436 aa12.41□□□□□ -0.42
RAB5B-210ENST00000553116 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
RAB5B-210ENST00000553116 CHD1O14646 1710 aa12.4□□□□□ -0.42
RAB5B-210ENST00000553116 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
RAB5B-210ENST00000553116 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
RAB5B-210ENST00000553116 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
RAB5B-210ENST00000553116 CCDC18Q5T9S5 1454 aa12.39□□□□□ -0.43
RAB5B-210ENST00000553116 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
RAB5B-210ENST00000553116 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
RAB5B-210ENST00000553116 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
RAB5B-210ENST00000553116 CDK13Q14004 1512 aaKnown RBP12.35□□□□□ -0.43
RAB5B-210ENST00000553116 SUPT6HQ7KZ85 1726 aaKnown RBP12.35□□□□□ -0.43
RAB5B-210ENST00000553116 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
RAB5B-210ENST00000553116 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
RAB5B-210ENST00000553116 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-210ENST00000553116 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
RAB5B-210ENST00000553116 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-210ENST00000553116 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
RAB5B-210ENST00000553116 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
RAB5B-210ENST00000553116 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
RAB5B-210ENST00000553116 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
RAB5B-210ENST00000553116 PTPRGP23470 1445 aa12.25□□□□□ -0.45
RAB5B-210ENST00000553116 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
RAB5B-210ENST00000553116 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
RAB5B-210ENST00000553116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB5B-210ENST00000553116 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
RAB5B-210ENST00000553116 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.45
RAB5B-210ENST00000553116 SHROOM2Q13796 1616 aa12.21□□□□□ -0.45
RAB5B-210ENST00000553116 ABCA8O94911 1581 aa12.21□□□□□ -0.46
RAB5B-210ENST00000553116 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
RAB5B-210ENST00000553116 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
RAB5B-210ENST00000553116 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
RAB5B-210ENST00000553116 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
RAB5B-210ENST00000553116 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
RAB5B-210ENST00000553116 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
RAB5B-210ENST00000553116 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
RAB5B-210ENST00000553116 ATP10BO94823 1461 aa12.16□□□□□ -0.46
RAB5B-210ENST00000553116 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
RAB5B-210ENST00000553116 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
RAB5B-210ENST00000553116 KIF14Q15058 1648 aa12.16□□□□□ -0.46
RAB5B-210ENST00000553116 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
RAB5B-210ENST00000553116 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
RAB5B-210ENST00000553116 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
RAB5B-210ENST00000553116 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
RAB5B-210ENST00000553116 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
RAB5B-210ENST00000553116 PTPRKQ15262 1439 aa12.13□□□□□ -0.47
RAB5B-210ENST00000553116 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
RAB5B-210ENST00000553116 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
RAB5B-210ENST00000553116 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
RAB5B-210ENST00000553116 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
RAB5B-210ENST00000553116 HFM1A2PYH4 1435 aa12.1□□□□□ -0.47
RAB5B-210ENST00000553116 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
RAB5B-210ENST00000553116 GPATCH8Q9UKJ3 1502 aaKnown RBP12.09□□□□□ -0.47
RAB5B-210ENST00000553116 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
RAB5B-210ENST00000553116 NAIPQ13075 1403 aa12.07□□□□□ -0.48
RAB5B-210ENST00000553116 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
RAB5B-210ENST00000553116 DAPK1P53355 1430 aa12.07□□□□□ -0.48
RAB5B-210ENST00000553116 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
RAB5B-210ENST00000553116 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms