RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
PPFIA2-228ENST00000553058 HS6ST3Q8IZP7 471 aa14.87□□□□□ -0.03
PPFIA2-228ENST00000553058 POLA2Q14181 598 aa14.85□□□□□ -0.03
PPFIA2-228ENST00000553058 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
PPFIA2-228ENST00000553058 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
PPFIA2-228ENST00000553058 MIER1Q8N108 512 aa14.76□□□□□ -0.05
PPFIA2-228ENST00000553058 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
PPFIA2-228ENST00000553058 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
PPFIA2-228ENST00000553058 GTPBP6O43824 516 aaPredicted RBP14.66□□□□□ -0.06
PPFIA2-228ENST00000553058 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
PPFIA2-228ENST00000553058 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
PPFIA2-228ENST00000553058 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
PPFIA2-228ENST00000553058 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
PPFIA2-228ENST00000553058 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
PPFIA2-228ENST00000553058 ZBTB47Q9UFB7 747 aaPredicted RBP14.59□□□□□ -0.07
PPFIA2-228ENST00000553058 PODXL2Q9NZ53 605 aa14.57□□□□□ -0.08
PPFIA2-228ENST00000553058 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
PPFIA2-228ENST00000553058 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
PPFIA2-228ENST00000553058 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
PPFIA2-228ENST00000553058 LMOD2Q6P5Q4 547 aa14.51□□□□□ -0.09
PPFIA2-228ENST00000553058 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
PPFIA2-228ENST00000553058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPFIA2-228ENST00000553058 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
PPFIA2-228ENST00000553058 CAPN15O75808 1086 aa14.47□□□□□ -0.09
PPFIA2-228ENST00000553058 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
PPFIA2-228ENST00000553058 RIOK3O14730 519 aaKnown RBP14.45□□□□□ -0.1
PPFIA2-228ENST00000553058 GSE1Q14687 1217 aa14.43□□□□□ -0.1
PPFIA2-228ENST00000553058 ATAD2BQ9ULI0 1458 aa14.42□□□□□ -0.1
PPFIA2-228ENST00000553058 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
PPFIA2-228ENST00000553058 STK25O00506 426 aa14.4□□□□□ -0.1
PPFIA2-228ENST00000553058 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
PPFIA2-228ENST00000553058 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
PPFIA2-228ENST00000553058 ABCB7O75027 752 aa14.36□□□□□ -0.11
PPFIA2-228ENST00000553058 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
PPFIA2-228ENST00000553058 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
PPFIA2-228ENST00000553058 KCNV2Q8TDN2 545 aa14.34□□□□□ -0.11
PPFIA2-228ENST00000553058 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
PPFIA2-228ENST00000553058 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
PPFIA2-228ENST00000553058 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
PPFIA2-228ENST00000553058 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
PPFIA2-228ENST00000553058 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
PPFIA2-228ENST00000553058 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
PPFIA2-228ENST00000553058 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
PPFIA2-228ENST00000553058 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
PPFIA2-228ENST00000553058 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
PPFIA2-228ENST00000553058 NUBP1P53384 320 aa14.25□□□□□ -0.13
PPFIA2-228ENST00000553058 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
PPFIA2-228ENST00000553058 CUX2O14529 1486 aa14.25□□□□□ -0.13
PPFIA2-228ENST00000553058 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
PPFIA2-228ENST00000553058 NESP48681 1621 aa14.23□□□□□ -0.13
PPFIA2-228ENST00000553058 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
PPFIA2-228ENST00000553058 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
PPFIA2-228ENST00000553058 TRIM26Q12899 539 aaPredicted RBP14.22□□□□□ -0.13
PPFIA2-228ENST00000553058 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
PPFIA2-228ENST00000553058 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
PPFIA2-228ENST00000553058 SGIP1Q9BQI5 828 aa14.21□□□□□ -0.13
PPFIA2-228ENST00000553058 BCL11BQ9C0K0 894 aaPredicted RBP14.21□□□□□ -0.13
PPFIA2-228ENST00000553058 SLC24A3Q9HC58 644 aa14.21□□□□□ -0.13
PPFIA2-228ENST00000553058 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
PPFIA2-228ENST00000553058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
PPFIA2-228ENST00000553058 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
PPFIA2-228ENST00000553058 CHRM1P11229 460 aaPredicted RBP14.11□□□□□ -0.15
PPFIA2-228ENST00000553058 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
PPFIA2-228ENST00000553058 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
PPFIA2-228ENST00000553058 HRCP23327 699 aa14.09□□□□□ -0.15
PPFIA2-228ENST00000553058 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
PPFIA2-228ENST00000553058 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
PPFIA2-228ENST00000553058 THOC2Q8NI27 1593 aaKnown RBP14.06□□□□□ -0.16
PPFIA2-228ENST00000553058 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
PPFIA2-228ENST00000553058 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
PPFIA2-228ENST00000553058 RSPH6AQ9H0K4 717 aa14.06□□□□□ -0.16
PPFIA2-228ENST00000553058 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
PPFIA2-228ENST00000553058 TESPA1A2RU30 521 aaPredicted RBP14.01□□□□□ -0.17
PPFIA2-228ENST00000553058 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
PPFIA2-228ENST00000553058 ZMYND10O75800 440 aa14□□□□□ -0.17
PPFIA2-228ENST00000553058 WIZO95785 1651 aa13.98□□□□□ -0.17
PPFIA2-228ENST00000553058 SEMA3EO15041 775 aa13.98□□□□□ -0.17
PPFIA2-228ENST00000553058 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
PPFIA2-228ENST00000553058 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
PPFIA2-228ENST00000553058 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
PPFIA2-228ENST00000553058 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
PPFIA2-228ENST00000553058 ARID3AQ99856 593 aa13.91□□□□□ -0.18
PPFIA2-228ENST00000553058 DSG3P32926 999 aa13.9□□□□□ -0.18
PPFIA2-228ENST00000553058 E2F4Q16254 413 aa13.9□□□□□ -0.18
PPFIA2-228ENST00000553058 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
PPFIA2-228ENST00000553058 BARGINQ6ZT62 677 aa13.89□□□□□ -0.19
PPFIA2-228ENST00000553058 WDR62O43379 1518 aa13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 PYGBP11216 843 aa13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 GPBP1L1Q9HC44 474 aaPredicted RBP13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 CFTRP13569 1480 aa13.87□□□□□ -0.19
PPFIA2-228ENST00000553058 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
PPFIA2-228ENST00000553058 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
PPFIA2-228ENST00000553058 AK7Q96M32 723 aa13.83□□□□□ -0.2
PPFIA2-228ENST00000553058 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
PPFIA2-228ENST00000553058 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
PPFIA2-228ENST00000553058 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
PPFIA2-228ENST00000553058 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
PPFIA2-228ENST00000553058 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms