RNA–Protein interactions for RNA: ENST00000552943.5

WDR90-224, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 5,498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-224ENST00000552943 NPM2Q86SE8 214 aaKnown RBP26.35■■□□□ 1.81
WDR90-224ENST00000552943 HIRIP3Q9BW71 556 aaPredicted RBP26.33■■□□□ 1.81
WDR90-224ENST00000552943 SALL2Q9Y467 1007 aaPredicted RBP26.31■■□□□ 1.8
WDR90-224ENST00000552943 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
WDR90-224ENST00000552943 WDR43Q15061 677 aaKnown RBP eCLIP26.24■■□□□ 1.79
WDR90-224ENST00000552943 CCDC136Q96JN2 1154 aa26.22■■□□□ 1.79
WDR90-224ENST00000552943 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
WDR90-224ENST00000552943 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.2■■□□□ 1.78
WDR90-224ENST00000552943 SOGA1O94964 1423 aa26.17■■□□□ 1.78
WDR90-224ENST00000552943 CFDP1Q9UEE9 299 aaPredicted RBP26.15■■□□□ 1.78
WDR90-224ENST00000552943 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.78
WDR90-224ENST00000552943 KCNH8Q96L42 1107 aa26.14■■□□□ 1.77
WDR90-224ENST00000552943 UPF2Q9HAU5 1272 aaKnown RBP26.13■■□□□ 1.77
WDR90-224ENST00000552943 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
WDR90-224ENST00000552943 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.76
WDR90-224ENST00000552943 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
WDR90-224ENST00000552943 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
WDR90-224ENST00000552943 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
WDR90-224ENST00000552943 CUX2O14529 1486 aa26.04■■□□□ 1.76
WDR90-224ENST00000552943 IRX6P78412 446 aaPredicted RBP26.03■■□□□ 1.76
WDR90-224ENST00000552943 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
WDR90-224ENST00000552943 HSP90AA1P07900 732 aaKnown RBP26■■□□□ 1.75
WDR90-224ENST00000552943 SIN3AQ96ST3 1273 aa25.99■■□□□ 1.75
WDR90-224ENST00000552943 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
WDR90-224ENST00000552943 VPS8Q8N3P4 1428 aa25.95■■□□□ 1.74
WDR90-224ENST00000552943 CARD11Q9BXL7 1154 aa25.93■■□□□ 1.74
WDR90-224ENST00000552943 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
WDR90-224ENST00000552943 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
WDR90-224ENST00000552943 CDCA8Q53HL2 280 aa25.9■■□□□ 1.74
WDR90-224ENST00000552943 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
WDR90-224ENST00000552943 ANP32BQ92688 251 aaKnown RBP25.84■■□□□ 1.73
WDR90-224ENST00000552943 TIMELESSQ9UNS1 1208 aa25.84■■□□□ 1.73
WDR90-224ENST00000552943 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
WDR90-224ENST00000552943 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
WDR90-224ENST00000552943 PPP1R15AO75807 674 aaPredicted RBP25.82■■□□□ 1.72
WDR90-224ENST00000552943 SETD5Q9C0A6 1442 aa25.78■■□□□ 1.72
WDR90-224ENST00000552943 WIZO95785 1651 aa25.78■■□□□ 1.72
WDR90-224ENST00000552943 ARHGAP35Q9NRY4 1499 aa25.76■■□□□ 1.72
WDR90-224ENST00000552943 CFAP53Q96M91 514 aa25.76■■□□□ 1.71
WDR90-224ENST00000552943 NBR1Q14596 966 aa25.76■■□□□ 1.71
WDR90-224ENST00000552943 SUPT16HQ9Y5B9 1047 aaKnown RBP25.75■■□□□ 1.71
WDR90-224ENST00000552943 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
WDR90-224ENST00000552943 MYH16Q9H6N6 1097 aa25.74■■□□□ 1.71
WDR90-224ENST00000552943 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
WDR90-224ENST00000552943 EIF5BO60841 1220 aaKnown RBP25.7■■□□□ 1.7
WDR90-224ENST00000552943 SENP3-EIF4A1A0A087X0R7 540 aa25.66■■□□□ 1.7
WDR90-224ENST00000552943 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.69
WDR90-224ENST00000552943 DDRGK1Q96HY6 314 aa25.62■■□□□ 1.69
WDR90-224ENST00000552943 FMN1Q68DA7 1419 aa25.62■■□□□ 1.69
WDR90-224ENST00000552943 DCAF11Q8TEB1 546 aa25.61■■□□□ 1.69
WDR90-224ENST00000552943 PPP4R2Q9NY27 417 aa25.58■■□□□ 1.69
WDR90-224ENST00000552943 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
WDR90-224ENST00000552943 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
WDR90-224ENST00000552943 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
WDR90-224ENST00000552943 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
WDR90-224ENST00000552943 TMF1P82094 1093 aa25.55■■□□□ 1.68
WDR90-224ENST00000552943 BECN1Q14457 450 aa25.55■■□□□ 1.68
WDR90-224ENST00000552943 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
WDR90-224ENST00000552943 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
WDR90-224ENST00000552943 KANK1Q14678 1352 aa25.53■■□□□ 1.68
WDR90-224ENST00000552943 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
WDR90-224ENST00000552943 HSPA5P11021 654 aaKnown RBP25.52■■□□□ 1.68
WDR90-224ENST00000552943 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
WDR90-224ENST00000552943 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
WDR90-224ENST00000552943 PPM1GO15355 546 aaPredicted RBP25.51■■□□□ 1.67
WDR90-224ENST00000552943 POGKQ9P215 609 aa25.51■■□□□ 1.67
WDR90-224ENST00000552943 MAPK8IP3Q9UPT6 1336 aa25.5■■□□□ 1.67
WDR90-224ENST00000552943 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
WDR90-224ENST00000552943 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
WDR90-224ENST00000552943 NEUROD2Q15784 382 aa25.49■■□□□ 1.67
WDR90-224ENST00000552943 PKD2Q13563 968 aa25.48■■□□□ 1.67
WDR90-224ENST00000552943 FTSJ3Q8IY81 847 aaKnown RBP25.48■■□□□ 1.67
WDR90-224ENST00000552943 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
WDR90-224ENST00000552943 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
WDR90-224ENST00000552943 ARXQ96QS3 562 aa25.43■■□□□ 1.66
WDR90-224ENST00000552943 GLIPR1L2Q4G1C9 344 aa25.43■■□□□ 1.66
WDR90-224ENST00000552943 MPHOSPH9Q99550 1183 aa25.43■■□□□ 1.66
WDR90-224ENST00000552943 FOXD1Q16676 465 aa25.42■■□□□ 1.66
WDR90-224ENST00000552943 PLEKHG5O94827 1062 aa25.41■■□□□ 1.66
WDR90-224ENST00000552943 TNNT2P45379 298 aaPredicted RBP25.41■■□□□ 1.66
WDR90-224ENST00000552943 FHOD3Q2V2M9 1422 aa25.38■■□□□ 1.65
WDR90-224ENST00000552943 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
WDR90-224ENST00000552943 LAS1LQ9Y4W2 734 aaKnown RBP25.36■■□□□ 1.65
WDR90-224ENST00000552943 FRAT1Q92837 279 aaPredicted RBP25.35■■□□□ 1.65
WDR90-224ENST00000552943 NUP155O75694 1391 aa25.33■■□□□ 1.65
WDR90-224ENST00000552943 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.64
WDR90-224ENST00000552943 ANP32EQ9BTT0 268 aa25.32■■□□□ 1.64
WDR90-224ENST00000552943 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
WDR90-224ENST00000552943 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
WDR90-224ENST00000552943 MS4A1P11836 297 aa25.31■■□□□ 1.64
WDR90-224ENST00000552943 KTN1Q86UP2 1357 aaKnown RBP25.29■■□□□ 1.64
WDR90-224ENST00000552943 RUSC2Q8N2Y8 1516 aa25.29■■□□□ 1.64
WDR90-224ENST00000552943 RGS3P49796 1198 aa25.29■■□□□ 1.64
WDR90-224ENST00000552943 GOLGA6L22H0YM25 854 aa25.28■■□□□ 1.64
WDR90-224ENST00000552943 CASC1Q6TDU7 716 aa25.28■■□□□ 1.64
WDR90-224ENST00000552943 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
WDR90-224ENST00000552943 A0A0G2JS52 829 aa25.27■■□□□ 1.64
WDR90-224ENST00000552943 EFCAB2Q5VUJ9 269 aa25.27■■□□□ 1.64
WDR90-224ENST00000552943 ROCK2O75116 1388 aaKnown RBP25.26■■□□□ 1.63
WDR90-224ENST00000552943 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms