RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
CDK4-213ENST00000552713 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
CDK4-213ENST00000552713 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.07
CDK4-213ENST00000552713 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
CDK4-213ENST00000552713 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
CDK4-213ENST00000552713 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
CDK4-213ENST00000552713 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
CDK4-213ENST00000552713 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
CDK4-213ENST00000552713 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
CDK4-213ENST00000552713 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
CDK4-213ENST00000552713 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
CDK4-213ENST00000552713 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
CDK4-213ENST00000552713 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
CDK4-213ENST00000552713 MAPKBP1O60336 1514 aa15.36■□□□□ 0.05
CDK4-213ENST00000552713 KDM4FA0A1W2PPD8 638 aa15.32■□□□□ 0.04
CDK4-213ENST00000552713 KDM6BO15054 1643 aa15.32■□□□□ 0.04
CDK4-213ENST00000552713 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK4-213ENST00000552713 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
CDK4-213ENST00000552713 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
CDK4-213ENST00000552713 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
CDK4-213ENST00000552713 IGF1RP08069 1367 aa15.21■□□□□ 0.02
CDK4-213ENST00000552713 CUL7Q14999 1698 aa15.19■□□□□ 0.02
CDK4-213ENST00000552713 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
CDK4-213ENST00000552713 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
CDK4-213ENST00000552713 PTPRGP23470 1445 aa15.16■□□□□ 0.02
CDK4-213ENST00000552713 ABCC2Q92887 1545 aa15.13■□□□□ 0.01
CDK4-213ENST00000552713 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
CDK4-213ENST00000552713 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
CDK4-213ENST00000552713 ADRA2BP18089 450 aa15.12■□□□□ 0.01
CDK4-213ENST00000552713 GLI2P10070 1586 aa15.11■□□□□ 0.01
CDK4-213ENST00000552713 ADGRL1O94910 1474 aa15.1■□□□□ 0.01
CDK4-213ENST00000552713 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
CDK4-213ENST00000552713 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
CDK4-213ENST00000552713 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
CDK4-213ENST00000552713 IQGAP2Q13576 1575 aa15.08■□□□□ 0
CDK4-213ENST00000552713 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
CDK4-213ENST00000552713 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
CDK4-213ENST00000552713 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
CDK4-213ENST00000552713 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
CDK4-213ENST00000552713 DISP1Q96F81 1524 aa15.05■□□□□ -0
CDK4-213ENST00000552713 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
CDK4-213ENST00000552713 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
CDK4-213ENST00000552713 UACAQ9BZF9 1416 aa15.03■□□□□ -0
CDK4-213ENST00000552713 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
CDK4-213ENST00000552713 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
CDK4-213ENST00000552713 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
CDK4-213ENST00000552713 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
CDK4-213ENST00000552713 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
CDK4-213ENST00000552713 TEX14Q8IWB6 1497 aa14.95□□□□□ -0.02
CDK4-213ENST00000552713 WDR7Q9Y4E6 1490 aa14.91□□□□□ -0.02
CDK4-213ENST00000552713 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
CDK4-213ENST00000552713 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
CDK4-213ENST00000552713 CTTNBP2Q8WZ74 1663 aa14.89□□□□□ -0.03
CDK4-213ENST00000552713 KIF21BO75037 1637 aa14.88□□□□□ -0.03
CDK4-213ENST00000552713 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
CDK4-213ENST00000552713 ABCA8O94911 1581 aa14.85□□□□□ -0.03
CDK4-213ENST00000552713 CD109Q6YHK3 1445 aa14.84□□□□□ -0.03
CDK4-213ENST00000552713 KCNH8Q96L42 1107 aa14.84□□□□□ -0.03
CDK4-213ENST00000552713 ADAMTSL3P82987 1691 aa14.76□□□□□ -0.05
CDK4-213ENST00000552713 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
CDK4-213ENST00000552713 ARID3CA6NKF2 412 aa14.75□□□□□ -0.05
CDK4-213ENST00000552713 ARAP3Q8WWN8 1544 aa14.75□□□□□ -0.05
CDK4-213ENST00000552713 ATP10BO94823 1461 aa14.71□□□□□ -0.05
CDK4-213ENST00000552713 PTPRMP28827 1452 aa14.71□□□□□ -0.05
CDK4-213ENST00000552713 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.05
CDK4-213ENST00000552713 FBXO41Q8TF61 875 aa14.71□□□□□ -0.05
CDK4-213ENST00000552713 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
CDK4-213ENST00000552713 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
CDK4-213ENST00000552713 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
CDK4-213ENST00000552713 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
CDK4-213ENST00000552713 MADDQ8WXG6 1647 aa14.68□□□□□ -0.06
CDK4-213ENST00000552713 RAPGEF3O95398 923 aa14.68□□□□□ -0.06
CDK4-213ENST00000552713 RIMS1Q86UR5 1692 aaKnown RBP14.64□□□□□ -0.07
CDK4-213ENST00000552713 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
CDK4-213ENST00000552713 PCF11O94913 1555 aaKnown RBP14.63□□□□□ -0.07
CDK4-213ENST00000552713 LMTK3Q96Q04 1460 aa14.63□□□□□ -0.07
CDK4-213ENST00000552713 SAMD9Q5K651 1589 aa14.62□□□□□ -0.07
CDK4-213ENST00000552713 NEO1Q92859 1461 aa14.62□□□□□ -0.07
CDK4-213ENST00000552713 PHLDB1Q86UU1 1377 aa14.61□□□□□ -0.07
CDK4-213ENST00000552713 RICTORQ6R327 1708 aa14.61□□□□□ -0.07
CDK4-213ENST00000552713 SIGLEC1Q9BZZ2 1709 aa14.61□□□□□ -0.07
CDK4-213ENST00000552713 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
CDK4-213ENST00000552713 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
CDK4-213ENST00000552713 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
CDK4-213ENST00000552713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
CDK4-213ENST00000552713 HSPA2P54652 639 aa14.55□□□□□ -0.08
CDK4-213ENST00000552713 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
CDK4-213ENST00000552713 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
CDK4-213ENST00000552713 DENND4BO75064 1496 aaPredicted RBP14.51□□□□□ -0.09
CDK4-213ENST00000552713 TTC37Q6PGP7 1564 aa14.51□□□□□ -0.09
CDK4-213ENST00000552713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDK4-213ENST00000552713 FHOD3Q2V2M9 1422 aa14.5□□□□□ -0.09
CDK4-213ENST00000552713 AKNAQ7Z591 1439 aa14.5□□□□□ -0.09
CDK4-213ENST00000552713 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
CDK4-213ENST00000552713 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
CDK4-213ENST00000552713 YEATS2Q9ULM3 1422 aa14.49□□□□□ -0.09
CDK4-213ENST00000552713 FANCAO15360 1455 aa14.49□□□□□ -0.09
CDK4-213ENST00000552713 ZMYM4Q5VZL5 1548 aa14.48□□□□□ -0.09
CDK4-213ENST00000552713 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
CDK4-213ENST00000552713 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms