RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-213ENST00000552627 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
SMARCC2-213ENST00000552627 ABCC9O60706 1549 aa11.68□□□□□ -0.54
SMARCC2-213ENST00000552627 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
SMARCC2-213ENST00000552627 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
SMARCC2-213ENST00000552627 CLCN6P51797 869 aa11.62□□□□□ -0.55
SMARCC2-213ENST00000552627 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
SMARCC2-213ENST00000552627 GABBR2O75899 941 aa11.61□□□□□ -0.55
SMARCC2-213ENST00000552627 GSE1Q14687 1217 aa11.61□□□□□ -0.55
SMARCC2-213ENST00000552627 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
SMARCC2-213ENST00000552627 KIF12Q96FN5 646 aa11.54□□□□□ -0.56
SMARCC2-213ENST00000552627 MAP3K13O43283 966 aa11.5□□□□□ -0.57
SMARCC2-213ENST00000552627 PYGBP11216 843 aa11.5□□□□□ -0.57
SMARCC2-213ENST00000552627 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
SMARCC2-213ENST00000552627 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
SMARCC2-213ENST00000552627 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
SMARCC2-213ENST00000552627 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
SMARCC2-213ENST00000552627 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
SMARCC2-213ENST00000552627 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
SMARCC2-213ENST00000552627 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
SMARCC2-213ENST00000552627 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
SMARCC2-213ENST00000552627 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
SMARCC2-213ENST00000552627 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-213ENST00000552627 PKD2Q13563 968 aa11.35□□□□□ -0.59
SMARCC2-213ENST00000552627 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
SMARCC2-213ENST00000552627 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
SMARCC2-213ENST00000552627 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
SMARCC2-213ENST00000552627 TIE1P35590 1138 aa11.32□□□□□ -0.6
SMARCC2-213ENST00000552627 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-213ENST00000552627 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-213ENST00000552627 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-213ENST00000552627 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
SMARCC2-213ENST00000552627 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
SMARCC2-213ENST00000552627 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-213ENST00000552627 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-213ENST00000552627 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-213ENST00000552627 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-213ENST00000552627 PSEN1P49768 467 aa11.24□□□□□ -0.61
SMARCC2-213ENST00000552627 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-213ENST00000552627 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
SMARCC2-213ENST00000552627 RGL2O15211 777 aa11.2□□□□□ -0.62
SMARCC2-213ENST00000552627 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
SMARCC2-213ENST00000552627 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
SMARCC2-213ENST00000552627 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-213ENST00000552627 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-213ENST00000552627 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
SMARCC2-213ENST00000552627 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
SMARCC2-213ENST00000552627 NACADO15069 1562 aa11.17□□□□□ -0.62
SMARCC2-213ENST00000552627 C7P10643 843 aa11.17□□□□□ -0.62
SMARCC2-213ENST00000552627 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
SMARCC2-213ENST00000552627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-213ENST00000552627 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
SMARCC2-213ENST00000552627 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
SMARCC2-213ENST00000552627 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
SMARCC2-213ENST00000552627 IER5LQ5T953 404 aa11.12□□□□□ -0.63
SMARCC2-213ENST00000552627 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-213ENST00000552627 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
SMARCC2-213ENST00000552627 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-213ENST00000552627 SEC24BO95487 1268 aa11.08□□□□□ -0.64
SMARCC2-213ENST00000552627 MYO15BQ96JP2 1530 aa11.07□□□□□ -0.64
SMARCC2-213ENST00000552627 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
SMARCC2-213ENST00000552627 STK25O00506 426 aa11.06□□□□□ -0.64
SMARCC2-213ENST00000552627 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
SMARCC2-213ENST00000552627 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
SMARCC2-213ENST00000552627 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
SMARCC2-213ENST00000552627 UNC13AQ9UPW8 1703 aa11.04□□□□□ -0.64
SMARCC2-213ENST00000552627 PLCG2P16885 1265 aa11.03□□□□□ -0.64
SMARCC2-213ENST00000552627 LHX8Q68G74 356 aa11.03□□□□□ -0.64
SMARCC2-213ENST00000552627 EFCAB3Q8N7B9 438 aa11.03□□□□□ -0.64
SMARCC2-213ENST00000552627 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
SMARCC2-213ENST00000552627 IRX5P78411 483 aaPredicted RBP11.02□□□□□ -0.65
SMARCC2-213ENST00000552627 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
SMARCC2-213ENST00000552627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.658e-7■■■■□ 20.9
SMARCC2-213ENST00000552627 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-213ENST00000552627 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
SMARCC2-213ENST00000552627 SOX12O15370 315 aa10.97□□□□□ -0.65
SMARCC2-213ENST00000552627 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
SMARCC2-213ENST00000552627 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
SMARCC2-213ENST00000552627 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
SMARCC2-213ENST00000552627 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-213ENST00000552627 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
SMARCC2-213ENST00000552627 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
SMARCC2-213ENST00000552627 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
SMARCC2-213ENST00000552627 NLRP6P59044 892 aa10.89□□□□□ -0.67
SMARCC2-213ENST00000552627 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
SMARCC2-213ENST00000552627 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
SMARCC2-213ENST00000552627 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
SMARCC2-213ENST00000552627 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
SMARCC2-213ENST00000552627 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
SMARCC2-213ENST00000552627 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
SMARCC2-213ENST00000552627 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
SMARCC2-213ENST00000552627 FBXO22Q8NEZ5 403 aa10.84□□□□□ -0.67
SMARCC2-213ENST00000552627 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
SMARCC2-213ENST00000552627 G3V3G9 751 aa10.83□□□□□ -0.68
SMARCC2-213ENST00000552627 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
SMARCC2-213ENST00000552627 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
SMARCC2-213ENST00000552627 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
SMARCC2-213ENST00000552627 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-213ENST00000552627 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
SMARCC2-213ENST00000552627 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms