RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
PFDN5-216ENST00000552341 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
PFDN5-216ENST00000552341 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
PFDN5-216ENST00000552341 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
PFDN5-216ENST00000552341 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
PFDN5-216ENST00000552341 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
PFDN5-216ENST00000552341 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
PFDN5-216ENST00000552341 APLP2Q06481 763 aa16.77■□□□□ 0.28
PFDN5-216ENST00000552341 FHOD3Q2V2M9 1422 aa16.77■□□□□ 0.27
PFDN5-216ENST00000552341 HRCP23327 699 aa16.75■□□□□ 0.27
PFDN5-216ENST00000552341 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
PFDN5-216ENST00000552341 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
PFDN5-216ENST00000552341 IQGAP2Q13576 1575 aa16.74■□□□□ 0.27
PFDN5-216ENST00000552341 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
PFDN5-216ENST00000552341 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
PFDN5-216ENST00000552341 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
PFDN5-216ENST00000552341 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
PFDN5-216ENST00000552341 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
PFDN5-216ENST00000552341 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
PFDN5-216ENST00000552341 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
PFDN5-216ENST00000552341 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
PFDN5-216ENST00000552341 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
PFDN5-216ENST00000552341 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
PFDN5-216ENST00000552341 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
PFDN5-216ENST00000552341 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
PFDN5-216ENST00000552341 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
PFDN5-216ENST00000552341 NUP160Q12769 1436 aa16.63■□□□□ 0.25
PFDN5-216ENST00000552341 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
PFDN5-216ENST00000552341 LRRIQ1Q96JM4 1722 aa16.61■□□□□ 0.25
PFDN5-216ENST00000552341 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
PFDN5-216ENST00000552341 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
PFDN5-216ENST00000552341 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
PFDN5-216ENST00000552341 FBLN2P98095 1184 aa16.57■□□□□ 0.24
PFDN5-216ENST00000552341 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
PFDN5-216ENST00000552341 CHD1O14646 1710 aa16.52■□□□□ 0.24
PFDN5-216ENST00000552341 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
PFDN5-216ENST00000552341 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
PFDN5-216ENST00000552341 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
PFDN5-216ENST00000552341 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
PFDN5-216ENST00000552341 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
PFDN5-216ENST00000552341 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
PFDN5-216ENST00000552341 EPRSP07814 1512 aaKnown RBP16.46■□□□□ 0.22
PFDN5-216ENST00000552341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.22
PFDN5-216ENST00000552341 MAGI3Q5TCQ9 1506 aa16.45■□□□□ 0.22
PFDN5-216ENST00000552341 CARMIL2Q6F5E8 1435 aa16.43■□□□□ 0.22
PFDN5-216ENST00000552341 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
PFDN5-216ENST00000552341 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
PFDN5-216ENST00000552341 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
PFDN5-216ENST00000552341 EHBP1L1Q8N3D4 1523 aa16.42■□□□□ 0.22
PFDN5-216ENST00000552341 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
PFDN5-216ENST00000552341 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
PFDN5-216ENST00000552341 SHROOM2Q13796 1616 aa16.4■□□□□ 0.22
PFDN5-216ENST00000552341 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
PFDN5-216ENST00000552341 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
PFDN5-216ENST00000552341 NCOA2Q15596 1464 aa16.38■□□□□ 0.21
PFDN5-216ENST00000552341 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
PFDN5-216ENST00000552341 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
PFDN5-216ENST00000552341 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
PFDN5-216ENST00000552341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.35■□□□□ 0.21
PFDN5-216ENST00000552341 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
PFDN5-216ENST00000552341 ABCA8O94911 1581 aa16.34■□□□□ 0.21
PFDN5-216ENST00000552341 CLASP1Q7Z460 1538 aa16.33■□□□□ 0.21
PFDN5-216ENST00000552341 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
PFDN5-216ENST00000552341 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
PFDN5-216ENST00000552341 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
PFDN5-216ENST00000552341 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
PFDN5-216ENST00000552341 PTPRGP23470 1445 aa16.27■□□□□ 0.2
PFDN5-216ENST00000552341 ITGAEP38570 1179 aa16.26■□□□□ 0.19
PFDN5-216ENST00000552341 PTPN23Q9H3S7 1636 aa16.24■□□□□ 0.19
PFDN5-216ENST00000552341 ATP10BO94823 1461 aa16.24■□□□□ 0.19
PFDN5-216ENST00000552341 TCOF1Q13428 1488 aaKnown RBP16.23■□□□□ 0.19
PFDN5-216ENST00000552341 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
PFDN5-216ENST00000552341 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
PFDN5-216ENST00000552341 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
PFDN5-216ENST00000552341 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
PFDN5-216ENST00000552341 PTPRKQ15262 1439 aa16.21■□□□□ 0.19
PFDN5-216ENST00000552341 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
PFDN5-216ENST00000552341 SETD5Q9C0A6 1442 aa16.2■□□□□ 0.18
PFDN5-216ENST00000552341 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
PFDN5-216ENST00000552341 KIF14Q15058 1648 aa16.19■□□□□ 0.18
PFDN5-216ENST00000552341 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
PFDN5-216ENST00000552341 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
PFDN5-216ENST00000552341 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
PFDN5-216ENST00000552341 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
PFDN5-216ENST00000552341 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
PFDN5-216ENST00000552341 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
PFDN5-216ENST00000552341 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
PFDN5-216ENST00000552341 HFM1A2PYH4 1435 aa16.12■□□□□ 0.17
PFDN5-216ENST00000552341 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
PFDN5-216ENST00000552341 CDC42BPAQ5VT25 1732 aa16.09■□□□□ 0.17
PFDN5-216ENST00000552341 NAIPQ13075 1403 aa16.09■□□□□ 0.17
PFDN5-216ENST00000552341 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
PFDN5-216ENST00000552341 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
PFDN5-216ENST00000552341 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
PFDN5-216ENST00000552341 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
PFDN5-216ENST00000552341 AKNAQ7Z591 1439 aa16.06■□□□□ 0.16
PFDN5-216ENST00000552341 KDM5BQ9UGL1 1544 aa16.06■□□□□ 0.16
PFDN5-216ENST00000552341 DAPK1P53355 1430 aa16.05■□□□□ 0.16
PFDN5-216ENST00000552341 CAMSAP2Q08AD1 1489 aa16.05■□□□□ 0.16
PFDN5-216ENST00000552341 ABCC5O15440 1437 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms