RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
RPH3A-217ENST00000549913 RRP7BPQ9NSQ0 103 aa15.13■□□□□ 0.01
RPH3A-217ENST00000549913 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
RPH3A-217ENST00000549913 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
RPH3A-217ENST00000549913 NBR1Q14596 966 aa15.12■□□□□ 0.01
RPH3A-217ENST00000549913 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
RPH3A-217ENST00000549913 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
RPH3A-217ENST00000549913 UPF2Q9HAU5 1272 aaKnown RBP15.08■□□□□ 0
RPH3A-217ENST00000549913 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
RPH3A-217ENST00000549913 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ 0
RPH3A-217ENST00000549913 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ -0
RPH3A-217ENST00000549913 ANP32EQ9BTT0 268 aa15.05■□□□□ -0
RPH3A-217ENST00000549913 PLEKHD1A6NEE1 506 aa15.03■□□□□ -0
RPH3A-217ENST00000549913 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
RPH3A-217ENST00000549913 ANP32BQ92688 251 aaKnown RBP14.99□□□□□ -0.01
RPH3A-217ENST00000549913 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
RPH3A-217ENST00000549913 SOGA1O94964 1423 aa14.99□□□□□ -0.01
RPH3A-217ENST00000549913 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
RPH3A-217ENST00000549913 CCNB3Q8WWL7 1395 aa14.95□□□□□ -0.02
RPH3A-217ENST00000549913 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
RPH3A-217ENST00000549913 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
RPH3A-217ENST00000549913 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
RPH3A-217ENST00000549913 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
RPH3A-217ENST00000549913 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
RPH3A-217ENST00000549913 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
RPH3A-217ENST00000549913 PPP4R2Q9NY27 417 aa14.9□□□□□ -0.02
RPH3A-217ENST00000549913 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
RPH3A-217ENST00000549913 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
RPH3A-217ENST00000549913 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
RPH3A-217ENST00000549913 CUX2O14529 1486 aa14.88□□□□□ -0.03
RPH3A-217ENST00000549913 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
RPH3A-217ENST00000549913 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
RPH3A-217ENST00000549913 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
RPH3A-217ENST00000549913 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
RPH3A-217ENST00000549913 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
RPH3A-217ENST00000549913 CCER2I3L3R5 266 aa14.82□□□□□ -0.04
RPH3A-217ENST00000549913 GLIPR1L2Q4G1C9 344 aa14.82□□□□□ -0.04
RPH3A-217ENST00000549913 ARXQ96QS3 562 aa14.82□□□□□ -0.04
RPH3A-217ENST00000549913 KNSTRNQ9Y448 316 aa14.82□□□□□ -0.04
RPH3A-217ENST00000549913 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
RPH3A-217ENST00000549913 BECN1Q14457 450 aa14.8□□□□□ -0.04
RPH3A-217ENST00000549913 SETD5Q9C0A6 1442 aa14.78□□□□□ -0.04
RPH3A-217ENST00000549913 PPM1GO15355 546 aaPredicted RBP14.77□□□□□ -0.04
RPH3A-217ENST00000549913 CFAP53Q96M91 514 aa14.77□□□□□ -0.04
RPH3A-217ENST00000549913 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.04
RPH3A-217ENST00000549913 KANK4Q5T7N3 995 aaPredicted RBP14.77□□□□□ -0.05
RPH3A-217ENST00000549913 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
RPH3A-217ENST00000549913 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
RPH3A-217ENST00000549913 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
RPH3A-217ENST00000549913 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
RPH3A-217ENST00000549913 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
RPH3A-217ENST00000549913 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
RPH3A-217ENST00000549913 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
RPH3A-217ENST00000549913 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
RPH3A-217ENST00000549913 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
RPH3A-217ENST00000549913 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
RPH3A-217ENST00000549913 WIZO95785 1651 aa14.7□□□□□ -0.06
RPH3A-217ENST00000549913 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
RPH3A-217ENST00000549913 LAS1LQ9Y4W2 734 aaKnown RBP14.68□□□□□ -0.06
RPH3A-217ENST00000549913 RAB3GAP2Q9H2M9 1393 aa14.68□□□□□ -0.06
RPH3A-217ENST00000549913 HSPA5P11021 654 aaKnown RBP14.67□□□□□ -0.06
RPH3A-217ENST00000549913 ERICH6BQ5W0A0 696 aa14.66□□□□□ -0.06
RPH3A-217ENST00000549913 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
RPH3A-217ENST00000549913 TMF1P82094 1093 aa14.65□□□□□ -0.06
RPH3A-217ENST00000549913 NEUROD2Q15784 382 aa14.64□□□□□ -0.07
RPH3A-217ENST00000549913 TRIM44Q96DX7 344 aaPredicted RBP14.64□□□□□ -0.07
RPH3A-217ENST00000549913 TSHZ2Q9NRE2 1034 aa14.64□□□□□ -0.07
RPH3A-217ENST00000549913 CC2D1BQ5T0F9 858 aaKnown RBP14.64□□□□□ -0.07
RPH3A-217ENST00000549913 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
RPH3A-217ENST00000549913 RGS3P49796 1198 aa14.63□□□□□ -0.07
RPH3A-217ENST00000549913 FTSJ3Q8IY81 847 aaKnown RBP14.63□□□□□ -0.07
RPH3A-217ENST00000549913 GOLGA6L22H0YM25 854 aa14.62□□□□□ -0.07
RPH3A-217ENST00000549913 MAPK8IP3Q9UPT6 1336 aa14.62□□□□□ -0.07
RPH3A-217ENST00000549913 PKD2Q13563 968 aa14.61□□□□□ -0.07
RPH3A-217ENST00000549913 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
RPH3A-217ENST00000549913 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
RPH3A-217ENST00000549913 PDS5BQ9NTI5 1447 aa14.6□□□□□ -0.07
RPH3A-217ENST00000549913 POGKQ9P215 609 aa14.6□□□□□ -0.07
RPH3A-217ENST00000549913 DEKP35659 375 aaKnown RBP14.58□□□□□ -0.07
RPH3A-217ENST00000549913 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
RPH3A-217ENST00000549913 KANK1Q14678 1352 aa14.58□□□□□ -0.08
RPH3A-217ENST00000549913 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.08
RPH3A-217ENST00000549913 FOXD1Q16676 465 aa14.57□□□□□ -0.08
RPH3A-217ENST00000549913 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
RPH3A-217ENST00000549913 TNNT2P45379 298 aaPredicted RBP14.57□□□□□ -0.08
RPH3A-217ENST00000549913 ZBTB7CA1YPR0 619 aa14.56□□□□□ -0.08
RPH3A-217ENST00000549913 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
RPH3A-217ENST00000549913 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
RPH3A-217ENST00000549913 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
RPH3A-217ENST00000549913 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
RPH3A-217ENST00000549913 ARID4BQ4LE39 1312 aaPredicted RBP14.55□□□□□ -0.08
RPH3A-217ENST00000549913 MS4A1P11836 297 aa14.54□□□□□ -0.08
RPH3A-217ENST00000549913 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
RPH3A-217ENST00000549913 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.08
RPH3A-217ENST00000549913 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.08
RPH3A-217ENST00000549913 PLEKHG5O94827 1062 aa14.52□□□□□ -0.08
RPH3A-217ENST00000549913 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.09
RPH3A-217ENST00000549913 CHMP4BQ9H444 224 aaKnown RBP14.52□□□□□ -0.09
RPH3A-217ENST00000549913 NUP155O75694 1391 aa14.52□□□□□ -0.09
RPH3A-217ENST00000549913 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms