RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
CDK17-204ENST00000548422 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
CDK17-204ENST00000548422 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
CDK17-204ENST00000548422 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
CDK17-204ENST00000548422 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
CDK17-204ENST00000548422 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
CDK17-204ENST00000548422 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
CDK17-204ENST00000548422 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
CDK17-204ENST00000548422 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
CDK17-204ENST00000548422 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
CDK17-204ENST00000548422 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
CDK17-204ENST00000548422 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
CDK17-204ENST00000548422 MIER1Q8N108 512 aa13.28□□□□□ -0.28
CDK17-204ENST00000548422 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
CDK17-204ENST00000548422 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
CDK17-204ENST00000548422 POTEMA6NI47 508 aa13.26□□□□□ -0.29
CDK17-204ENST00000548422 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
CDK17-204ENST00000548422 VASPP50552 380 aaPredicted RBP13.26□□□□□ -0.29
CDK17-204ENST00000548422 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
CDK17-204ENST00000548422 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
CDK17-204ENST00000548422 CLCN6P51797 869 aa13.21□□□□□ -0.29
CDK17-204ENST00000548422 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
CDK17-204ENST00000548422 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
CDK17-204ENST00000548422 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
CDK17-204ENST00000548422 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
CDK17-204ENST00000548422 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
CDK17-204ENST00000548422 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
CDK17-204ENST00000548422 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
CDK17-204ENST00000548422 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
CDK17-204ENST00000548422 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
CDK17-204ENST00000548422 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
CDK17-204ENST00000548422 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
CDK17-204ENST00000548422 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
CDK17-204ENST00000548422 NESP48681 1621 aa13.05□□□□□ -0.32
CDK17-204ENST00000548422 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
CDK17-204ENST00000548422 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK17-204ENST00000548422 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
CDK17-204ENST00000548422 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
CDK17-204ENST00000548422 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
CDK17-204ENST00000548422 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
CDK17-204ENST00000548422 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
CDK17-204ENST00000548422 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
CDK17-204ENST00000548422 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
CDK17-204ENST00000548422 PCDH10Q9P2E7 1040 aa12.98□□□□□ -0.33
CDK17-204ENST00000548422 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
CDK17-204ENST00000548422 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
CDK17-204ENST00000548422 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
CDK17-204ENST00000548422 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
CDK17-204ENST00000548422 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
CDK17-204ENST00000548422 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
CDK17-204ENST00000548422 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
CDK17-204ENST00000548422 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
CDK17-204ENST00000548422 NUBP1P53384 320 aa12.85□□□□□ -0.35
CDK17-204ENST00000548422 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
CDK17-204ENST00000548422 FAM9AQ8IZU1 332 aaPredicted RBP12.84□□□□□ -0.35
CDK17-204ENST00000548422 MRC2Q9UBG0 1479 aa12.84□□□□□ -0.35
CDK17-204ENST00000548422 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
CDK17-204ENST00000548422 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
CDK17-204ENST00000548422 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
CDK17-204ENST00000548422 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
CDK17-204ENST00000548422 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CDK17-204ENST00000548422 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
CDK17-204ENST00000548422 WDR62O43379 1518 aa12.81□□□□□ -0.36
CDK17-204ENST00000548422 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
CDK17-204ENST00000548422 GSE1Q14687 1217 aa12.77□□□□□ -0.37
CDK17-204ENST00000548422 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.37
CDK17-204ENST00000548422 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.37
CDK17-204ENST00000548422 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.37
CDK17-204ENST00000548422 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
CDK17-204ENST00000548422 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
CDK17-204ENST00000548422 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
CDK17-204ENST00000548422 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
CDK17-204ENST00000548422 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
CDK17-204ENST00000548422 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
CDK17-204ENST00000548422 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
CDK17-204ENST00000548422 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
CDK17-204ENST00000548422 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
CDK17-204ENST00000548422 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
CDK17-204ENST00000548422 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
CDK17-204ENST00000548422 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
CDK17-204ENST00000548422 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
CDK17-204ENST00000548422 C7P10643 843 aa12.65□□□□□ -0.38
CDK17-204ENST00000548422 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
CDK17-204ENST00000548422 CCDC61Q9Y6R9 512 aa12.63□□□□□ -0.39
CDK17-204ENST00000548422 PYGBP11216 843 aa12.62□□□□□ -0.39
CDK17-204ENST00000548422 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
CDK17-204ENST00000548422 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
CDK17-204ENST00000548422 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
CDK17-204ENST00000548422 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
CDK17-204ENST00000548422 PKD2Q13563 968 aa12.6□□□□□ -0.39
CDK17-204ENST00000548422 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
CDK17-204ENST00000548422 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
CDK17-204ENST00000548422 GTF3C3Q9Y5Q9 886 aa12.57□□□□□ -0.4
CDK17-204ENST00000548422 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
CDK17-204ENST00000548422 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
CDK17-204ENST00000548422 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
CDK17-204ENST00000548422 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
CDK17-204ENST00000548422 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
CDK17-204ENST00000548422 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
CDK17-204ENST00000548422 MAP3K13O43283 966 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms