RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
NPIPB12-203ENST00000548346 PHF12Q96QT6 1004 aa10.76□□□□□ -0.69
NPIPB12-203ENST00000548346 POTEIP0CG38 1075 aa10.75□□□□□ -0.69
NPIPB12-203ENST00000548346 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
NPIPB12-203ENST00000548346 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
NPIPB12-203ENST00000548346 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
NPIPB12-203ENST00000548346 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.69
NPIPB12-203ENST00000548346 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
NPIPB12-203ENST00000548346 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
NPIPB12-203ENST00000548346 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
NPIPB12-203ENST00000548346 NUBP1P53384 320 aa10.67□□□□□ -0.7
NPIPB12-203ENST00000548346 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
NPIPB12-203ENST00000548346 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
NPIPB12-203ENST00000548346 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
NPIPB12-203ENST00000548346 CLCN6P51797 869 aa10.64□□□□□ -0.71
NPIPB12-203ENST00000548346 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
NPIPB12-203ENST00000548346 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
NPIPB12-203ENST00000548346 CUX2O14529 1486 aa10.57□□□□□ -0.72
NPIPB12-203ENST00000548346 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
NPIPB12-203ENST00000548346 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
NPIPB12-203ENST00000548346 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
NPIPB12-203ENST00000548346 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
NPIPB12-203ENST00000548346 MAP3K13O43283 966 aa10.53□□□□□ -0.72
NPIPB12-203ENST00000548346 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
NPIPB12-203ENST00000548346 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
NPIPB12-203ENST00000548346 SCRIBQ14160 1630 aa10.48□□□□□ -0.73
NPIPB12-203ENST00000548346 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
NPIPB12-203ENST00000548346 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
NPIPB12-203ENST00000548346 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
NPIPB12-203ENST00000548346 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
NPIPB12-203ENST00000548346 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
NPIPB12-203ENST00000548346 LHX8Q68G74 356 aa10.45□□□□□ -0.74
NPIPB12-203ENST00000548346 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
NPIPB12-203ENST00000548346 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
NPIPB12-203ENST00000548346 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
NPIPB12-203ENST00000548346 IFNL1Q8IU54 200 aa10.42□□□□□ -0.74
NPIPB12-203ENST00000548346 POTEB2H3BUK9 544 aa10.41□□□□□ -0.74
NPIPB12-203ENST00000548346 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
NPIPB12-203ENST00000548346 PYGBP11216 843 aa10.4□□□□□ -0.74
NPIPB12-203ENST00000548346 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
NPIPB12-203ENST00000548346 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
NPIPB12-203ENST00000548346 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
NPIPB12-203ENST00000548346 TIE1P35590 1138 aa10.36□□□□□ -0.75
NPIPB12-203ENST00000548346 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
NPIPB12-203ENST00000548346 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
NPIPB12-203ENST00000548346 METRNQ9UJH8 293 aa10.33□□□□□ -0.76
NPIPB12-203ENST00000548346 PCDHB8Q9UN66 801 aa10.33□□□□□ -0.76
NPIPB12-203ENST00000548346 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
NPIPB12-203ENST00000548346 GSE1Q14687 1217 aa10.31□□□□□ -0.76
NPIPB12-203ENST00000548346 C7P10643 843 aa10.29□□□□□ -0.76
NPIPB12-203ENST00000548346 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
NPIPB12-203ENST00000548346 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
NPIPB12-203ENST00000548346 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
NPIPB12-203ENST00000548346 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
NPIPB12-203ENST00000548346 NCAPD3P42695 1498 aa10.27□□□□□ -0.77
NPIPB12-203ENST00000548346 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
NPIPB12-203ENST00000548346 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
NPIPB12-203ENST00000548346 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
NPIPB12-203ENST00000548346 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
NPIPB12-203ENST00000548346 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
NPIPB12-203ENST00000548346 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
NPIPB12-203ENST00000548346 NESP48681 1621 aa10.18□□□□□ -0.78
NPIPB12-203ENST00000548346 IER5LQ5T953 404 aa10.17□□□□□ -0.78
NPIPB12-203ENST00000548346 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
NPIPB12-203ENST00000548346 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
NPIPB12-203ENST00000548346 ATAD2BQ9ULI0 1458 aa10.15□□□□□ -0.78
NPIPB12-203ENST00000548346 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
NPIPB12-203ENST00000548346 PSEN1P49768 467 aa10.14□□□□□ -0.79
NPIPB12-203ENST00000548346 SEC24BO95487 1268 aa10.11□□□□□ -0.79
NPIPB12-203ENST00000548346 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
NPIPB12-203ENST00000548346 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
NPIPB12-203ENST00000548346 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
NPIPB12-203ENST00000548346 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
NPIPB12-203ENST00000548346 PKD2Q13563 968 aa10.05□□□□□ -0.8
NPIPB12-203ENST00000548346 PLCG2P16885 1265 aa10.04□□□□□ -0.8
NPIPB12-203ENST00000548346 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
NPIPB12-203ENST00000548346 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
NPIPB12-203ENST00000548346 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
NPIPB12-203ENST00000548346 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
NPIPB12-203ENST00000548346 CABP2Q9NPB3 220 aa10.02□□□□□ -0.81
NPIPB12-203ENST00000548346 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
NPIPB12-203ENST00000548346 KIF21AQ7Z4S6 1674 aa10□□□□□ -0.81
NPIPB12-203ENST00000548346 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
NPIPB12-203ENST00000548346 SMARCA4P51532 1647 aa10□□□□□ -0.81
NPIPB12-203ENST00000548346 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
NPIPB12-203ENST00000548346 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
NPIPB12-203ENST00000548346 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
NPIPB12-203ENST00000548346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
NPIPB12-203ENST00000548346 MKRN3Q13064 507 aaKnown RBP9.98□□□□□ -0.81
NPIPB12-203ENST00000548346 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
NPIPB12-203ENST00000548346 WDR62O43379 1518 aa9.97□□□□□ -0.81
NPIPB12-203ENST00000548346 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
NPIPB12-203ENST00000548346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.81
NPIPB12-203ENST00000548346 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
NPIPB12-203ENST00000548346 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
NPIPB12-203ENST00000548346 GOLGA2Q08379 1002 aa9.96□□□□□ -0.82
NPIPB12-203ENST00000548346 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
NPIPB12-203ENST00000548346 RGL2O15211 777 aa9.94□□□□□ -0.82
NPIPB12-203ENST00000548346 ECM2O94769 699 aaPredicted RBP9.94□□□□□ -0.82
NPIPB12-203ENST00000548346 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms