RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
CBX5-203ENST00000547872 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
CBX5-203ENST00000547872 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
CBX5-203ENST00000547872 PKD2Q13563 968 aa10.68□□□□□ -0.7
CBX5-203ENST00000547872 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
CBX5-203ENST00000547872 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
CBX5-203ENST00000547872 PYGBP11216 843 aa10.63□□□□□ -0.71
CBX5-203ENST00000547872 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CBX5-203ENST00000547872 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
CBX5-203ENST00000547872 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
CBX5-203ENST00000547872 EVX2Q03828 476 aa10.56□□□□□ -0.72
CBX5-203ENST00000547872 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
CBX5-203ENST00000547872 KIF12Q96FN5 646 aa10.54□□□□□ -0.72
CBX5-203ENST00000547872 RGL2O15211 777 aa10.53□□□□□ -0.72
CBX5-203ENST00000547872 MAP3K13O43283 966 aa10.52□□□□□ -0.73
CBX5-203ENST00000547872 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
CBX5-203ENST00000547872 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
CBX5-203ENST00000547872 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
CBX5-203ENST00000547872 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
CBX5-203ENST00000547872 CLCN6P51797 869 aa10.49□□□□□ -0.73
CBX5-203ENST00000547872 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
CBX5-203ENST00000547872 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
CBX5-203ENST00000547872 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
CBX5-203ENST00000547872 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
CBX5-203ENST00000547872 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
CBX5-203ENST00000547872 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
CBX5-203ENST00000547872 NISCHQ9Y2I1 1504 aa10.43□□□□□ -0.74
CBX5-203ENST00000547872 SP7Q8TDD2 431 aaPredicted RBP10.42□□□□□ -0.74
CBX5-203ENST00000547872 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
CBX5-203ENST00000547872 GABBR2O75899 941 aa10.4□□□□□ -0.74
CBX5-203ENST00000547872 PDAP1Q13442 181 aaKnown RBP10.4□□□□□ -0.74
CBX5-203ENST00000547872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
CBX5-203ENST00000547872 PSEN1P49768 467 aa10.37□□□□□ -0.75
CBX5-203ENST00000547872 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
CBX5-203ENST00000547872 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CBX5-203ENST00000547872 STK25O00506 426 aa10.35□□□□□ -0.75
CBX5-203ENST00000547872 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
CBX5-203ENST00000547872 TIE1P35590 1138 aa10.33□□□□□ -0.76
CBX5-203ENST00000547872 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
CBX5-203ENST00000547872 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
CBX5-203ENST00000547872 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
CBX5-203ENST00000547872 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
CBX5-203ENST00000547872 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
CBX5-203ENST00000547872 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
CBX5-203ENST00000547872 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
CBX5-203ENST00000547872 GOLGA2Q08379 1002 aa10.27□□□□□ -0.77
CBX5-203ENST00000547872 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
CBX5-203ENST00000547872 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
CBX5-203ENST00000547872 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
CBX5-203ENST00000547872 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CBX5-203ENST00000547872 ATN1P54259 1190 aaPredicted RBP10.22□□□□□ -0.77
CBX5-203ENST00000547872 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.22□□□□□ -0.77
CBX5-203ENST00000547872 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
CBX5-203ENST00000547872 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
CBX5-203ENST00000547872 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
CBX5-203ENST00000547872 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
CBX5-203ENST00000547872 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
CBX5-203ENST00000547872 SOX12O15370 315 aa10.14□□□□□ -0.79
CBX5-203ENST00000547872 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
CBX5-203ENST00000547872 IER5LQ5T953 404 aa10.13□□□□□ -0.79
CBX5-203ENST00000547872 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
CBX5-203ENST00000547872 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
CBX5-203ENST00000547872 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
CBX5-203ENST00000547872 NLRP6P59044 892 aa10.11□□□□□ -0.79
CBX5-203ENST00000547872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■■□□□ 14.2
CBX5-203ENST00000547872 PAXIP1Q6ZW49 1069 aaPredicted RBP10.1□□□□□ -0.79
CBX5-203ENST00000547872 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
CBX5-203ENST00000547872 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
CBX5-203ENST00000547872 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
CBX5-203ENST00000547872 PHF8Q9UPP1 1060 aa10.1□□□□□ -0.79
CBX5-203ENST00000547872 SEC24BO95487 1268 aa10.09□□□□□ -0.79
CBX5-203ENST00000547872 C7P10643 843 aa10.09□□□□□ -0.79
CBX5-203ENST00000547872 PLCG2P16885 1265 aa10.08□□□□□ -0.8
CBX5-203ENST00000547872 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
CBX5-203ENST00000547872 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
CBX5-203ENST00000547872 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
CBX5-203ENST00000547872 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
CBX5-203ENST00000547872 FBXO22Q8NEZ5 403 aa10.05□□□□□ -0.8
CBX5-203ENST00000547872 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
CBX5-203ENST00000547872 ABCC9O60706 1549 aa10.03□□□□□ -0.8
CBX5-203ENST00000547872 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
CBX5-203ENST00000547872 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
CBX5-203ENST00000547872 COLQQ9Y215 455 aaPredicted RBP10.01□□□□□ -0.81
CBX5-203ENST00000547872 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
CBX5-203ENST00000547872 G3V3G9 751 aa9.98□□□□□ -0.81
CBX5-203ENST00000547872 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CBX5-203ENST00000547872 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
CBX5-203ENST00000547872 PPP1R37O75864 691 aa9.95□□□□□ -0.82
CBX5-203ENST00000547872 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
CBX5-203ENST00000547872 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
CBX5-203ENST00000547872 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
CBX5-203ENST00000547872 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
CBX5-203ENST00000547872 C3orf67Q6ZVT6 689 aa9.87□□□□□ -0.83
CBX5-203ENST00000547872 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
CBX5-203ENST00000547872 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
CBX5-203ENST00000547872 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
CBX5-203ENST00000547872 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
CBX5-203ENST00000547872 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
CBX5-203ENST00000547872 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
CBX5-203ENST00000547872 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms