RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
HDAC7-226ENST00000547259 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
HDAC7-226ENST00000547259 KIF13AQ9H1H9 1805 aa20.52■□□□□ 0.88
HDAC7-226ENST00000547259 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
HDAC7-226ENST00000547259 CUL7Q14999 1698 aa20.5■□□□□ 0.87
HDAC7-226ENST00000547259 IGF1RP08069 1367 aa20.48■□□□□ 0.87
HDAC7-226ENST00000547259 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
HDAC7-226ENST00000547259 ABCC10Q5T3U5 1492 aa20.44■□□□□ 0.86
HDAC7-226ENST00000547259 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
HDAC7-226ENST00000547259 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
HDAC7-226ENST00000547259 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
HDAC7-226ENST00000547259 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
HDAC7-226ENST00000547259 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
HDAC7-226ENST00000547259 PTPRGP23470 1445 aa20.34■□□□□ 0.85
HDAC7-226ENST00000547259 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
HDAC7-226ENST00000547259 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
HDAC7-226ENST00000547259 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
HDAC7-226ENST00000547259 KDM6BO15054 1643 aa20.24■□□□□ 0.83
HDAC7-226ENST00000547259 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
HDAC7-226ENST00000547259 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
HDAC7-226ENST00000547259 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
HDAC7-226ENST00000547259 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
HDAC7-226ENST00000547259 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
HDAC7-226ENST00000547259 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
HDAC7-226ENST00000547259 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
HDAC7-226ENST00000547259 ASXL2Q76L83 1435 aa20.15■□□□□ 0.82
HDAC7-226ENST00000547259 GLI2P10070 1586 aa20.15■□□□□ 0.82
HDAC7-226ENST00000547259 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
HDAC7-226ENST00000547259 DISP1Q96F81 1524 aa20.12■□□□□ 0.81
HDAC7-226ENST00000547259 KDM5BQ9UGL1 1544 aa20.08■□□□□ 0.81
HDAC7-226ENST00000547259 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-226ENST00000547259 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
HDAC7-226ENST00000547259 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
HDAC7-226ENST00000547259 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
HDAC7-226ENST00000547259 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
HDAC7-226ENST00000547259 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
HDAC7-226ENST00000547259 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.8
HDAC7-226ENST00000547259 CTTNBP2Q8WZ74 1663 aa20.01■□□□□ 0.79
HDAC7-226ENST00000547259 ZCCHC11Q5TAX3 1644 aaKnown RBP20.01■□□□□ 0.79
HDAC7-226ENST00000547259 MAP3K4Q9Y6R4 1608 aa20■□□□□ 0.79
HDAC7-226ENST00000547259 EEA1Q15075 1411 aa19.98■□□□□ 0.79
HDAC7-226ENST00000547259 WDR7Q9Y4E6 1490 aa19.95■□□□□ 0.78
HDAC7-226ENST00000547259 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
HDAC7-226ENST00000547259 CFAP43Q8NDM7 1665 aa19.88■□□□□ 0.77
HDAC7-226ENST00000547259 ABCA8O94911 1581 aa19.87■□□□□ 0.77
HDAC7-226ENST00000547259 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
HDAC7-226ENST00000547259 COL17A1Q9UMD9 1497 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-226ENST00000547259 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
HDAC7-226ENST00000547259 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
HDAC7-226ENST00000547259 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
HDAC7-226ENST00000547259 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
HDAC7-226ENST00000547259 KIF21BO75037 1637 aa19.8■□□□□ 0.76
HDAC7-226ENST00000547259 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
HDAC7-226ENST00000547259 ATP10BO94823 1461 aa19.72■□□□□ 0.75
HDAC7-226ENST00000547259 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
HDAC7-226ENST00000547259 P3H3Q8IVL6 736 aa19.71■□□□□ 0.75
HDAC7-226ENST00000547259 SAMD9Q5K651 1589 aa19.68■□□□□ 0.74
HDAC7-226ENST00000547259 ABCA9Q8IUA7 1624 aa19.67■□□□□ 0.74
HDAC7-226ENST00000547259 RAPGEF6Q8TEU7 1601 aa19.66■□□□□ 0.74
HDAC7-226ENST00000547259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-226ENST00000547259 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
HDAC7-226ENST00000547259 ARID3CA6NKF2 412 aa19.64■□□□□ 0.73
HDAC7-226ENST00000547259 HECW2Q9P2P5 1572 aa19.63■□□□□ 0.73
HDAC7-226ENST00000547259 NEO1Q92859 1461 aa19.63■□□□□ 0.73
HDAC7-226ENST00000547259 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
HDAC7-226ENST00000547259 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
HDAC7-226ENST00000547259 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-226ENST00000547259 NUP153P49790 1475 aaKnown RBP19.54■□□□□ 0.72
HDAC7-226ENST00000547259 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
HDAC7-226ENST00000547259 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
HDAC7-226ENST00000547259 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
HDAC7-226ENST00000547259 RANGAP1P46060 587 aaPredicted RBP19.51■□□□□ 0.71
HDAC7-226ENST00000547259 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
HDAC7-226ENST00000547259 CFAP74Q9C0B2 1584 aa19.5■□□□□ 0.71
HDAC7-226ENST00000547259 ADAMTSL3P82987 1691 aa19.49■□□□□ 0.71
HDAC7-226ENST00000547259 ARID4BQ4LE39 1312 aaPredicted RBP19.49■□□□□ 0.71
HDAC7-226ENST00000547259 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
HDAC7-226ENST00000547259 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-226ENST00000547259 PTPRMP28827 1452 aa19.47■□□□□ 0.71
HDAC7-226ENST00000547259 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
HDAC7-226ENST00000547259 FANCAO15360 1455 aa19.44■□□□□ 0.7
HDAC7-226ENST00000547259 BCORL1Q5H9F3 1711 aa19.44■□□□□ 0.7
HDAC7-226ENST00000547259 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
HDAC7-226ENST00000547259 RICTORQ6R327 1708 aa19.42■□□□□ 0.7
HDAC7-226ENST00000547259 POGZQ7Z3K3 1410 aa19.42■□□□□ 0.7
HDAC7-226ENST00000547259 CDK11AQ9UQ88 783 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-226ENST00000547259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
HDAC7-226ENST00000547259 ARHGEF40Q8TER5 1519 aa19.4■□□□□ 0.7
HDAC7-226ENST00000547259 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
HDAC7-226ENST00000547259 MAGI2Q86UL8 1455 aa19.39■□□□□ 0.69
HDAC7-226ENST00000547259 MADDQ8WXG6 1647 aa19.36■□□□□ 0.69
HDAC7-226ENST00000547259 ZMYM4Q5VZL5 1548 aa19.36■□□□□ 0.69
HDAC7-226ENST00000547259 PLCH2O75038 1416 aa19.34■□□□□ 0.69
HDAC7-226ENST00000547259 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
HDAC7-226ENST00000547259 TTC37Q6PGP7 1564 aa19.34■□□□□ 0.69
HDAC7-226ENST00000547259 ATP1B4Q9UN42 357 aaPredicted RBP19.33■□□□□ 0.68
HDAC7-226ENST00000547259 HECW1Q76N89 1606 aa19.33■□□□□ 0.68
HDAC7-226ENST00000547259 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
HDAC7-226ENST00000547259 ZFYVE16Q7Z3T8 1539 aa19.32■□□□□ 0.68
HDAC7-226ENST00000547259 EFCAB2Q5VUJ9 269 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms