RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 ASTLQ6HA08 431 aaPredicted RBP8.63□□□□□ -1.03
MDM1-215ENST00000545964 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
MDM1-215ENST00000545964 METRNQ9UJH8 293 aa8.62□□□□□ -1.03
MDM1-215ENST00000545964 PHF12Q96QT6 1004 aa8.6□□□□□ -1.03
MDM1-215ENST00000545964 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
MDM1-215ENST00000545964 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
MDM1-215ENST00000545964 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
MDM1-215ENST00000545964 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
MDM1-215ENST00000545964 SPDYE4A6NLX3 237 aa8.49□□□□□ -1.05
MDM1-215ENST00000545964 MNX1P50219 401 aaPredicted RBP8.46□□□□□ -1.06
MDM1-215ENST00000545964 RB1CC1Q8TDY2 1594 aa8.45□□□□□ -1.06
MDM1-215ENST00000545964 EHMT2Q96KQ7 1210 aa8.44□□□□□ -1.06
MDM1-215ENST00000545964 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
MDM1-215ENST00000545964 POTEJP0CG39 1038 aa8.43□□□□□ -1.06
MDM1-215ENST00000545964 TIE1P35590 1138 aa8.42□□□□□ -1.06
MDM1-215ENST00000545964 ATN1P54259 1190 aaPredicted RBP8.41□□□□□ -1.06
MDM1-215ENST00000545964 CSRNP3Q8WYN3 585 aa8.41□□□□□ -1.06
MDM1-215ENST00000545964 SEC24BO95487 1268 aa8.4□□□□□ -1.06
MDM1-215ENST00000545964 LCE2DQ5TA82 110 aaPredicted RBP8.4□□□□□ -1.06
MDM1-215ENST00000545964 CDAN1Q8IWY9 1227 aa8.4□□□□□ -1.06
MDM1-215ENST00000545964 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
MDM1-215ENST00000545964 CCDC61Q9Y6R9 512 aa8.38□□□□□ -1.07
MDM1-215ENST00000545964 NACADO15069 1562 aa8.37□□□□□ -1.07
MDM1-215ENST00000545964 IER5LQ5T953 404 aa8.37□□□□□ -1.07
MDM1-215ENST00000545964 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
MDM1-215ENST00000545964 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.07
MDM1-215ENST00000545964 SGIP1Q9BQI5 828 aa8.33□□□□□ -1.08
MDM1-215ENST00000545964 POTEFA5A3E0 1075 aa8.29□□□□□ -1.08
MDM1-215ENST00000545964 SNPHO15079 494 aa8.29□□□□□ -1.08
MDM1-215ENST00000545964 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
MDM1-215ENST00000545964 TTLL13PA6NNM8 815 aa8.26□□□□□ -1.09
MDM1-215ENST00000545964 MAP3K13O43283 966 aa8.26□□□□□ -1.09
MDM1-215ENST00000545964 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
MDM1-215ENST00000545964 ST18O60284 1047 aa8.23□□□□□ -1.09
MDM1-215ENST00000545964 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
MDM1-215ENST00000545964 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
MDM1-215ENST00000545964 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
MDM1-215ENST00000545964 PLCG2P16885 1265 aa8.21□□□□□ -1.1
MDM1-215ENST00000545964 MMRN1Q13201 1228 aa8.21□□□□□ -1.1
MDM1-215ENST00000545964 MIER1Q8N108 512 aa8.19□□□□□ -1.1
MDM1-215ENST00000545964 PROM2Q8N271 834 aa8.19□□□□□ -1.1
MDM1-215ENST00000545964 PCDHB13Q9Y5F0 798 aa8.19□□□□□ -1.1
MDM1-215ENST00000545964 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
MDM1-215ENST00000545964 BICRAQ9NZM4 1560 aa8.18□□□□□ -1.1
MDM1-215ENST00000545964 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
MDM1-215ENST00000545964 TRPC6Q9Y210 931 aa8.18□□□□□ -1.1
MDM1-215ENST00000545964 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
MDM1-215ENST00000545964 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.15□□□□□ -1.1
MDM1-215ENST00000545964 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
MDM1-215ENST00000545964 ZCCHC6Q5VYS8 1495 aaKnown RBP8.12□□□□□ -1.11
MDM1-215ENST00000545964 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
MDM1-215ENST00000545964 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
MDM1-215ENST00000545964 TMEM106CQ9BVX2 250 aa8.1□□□□□ -1.11
MDM1-215ENST00000545964 CECR2Q9BXF3 1484 aa8.09□□□□□ -1.11
MDM1-215ENST00000545964 FAM212AQ96EL1 285 aa8.09□□□□□ -1.11
MDM1-215ENST00000545964 SCRIBQ14160 1630 aa8.08□□□□□ -1.12
MDM1-215ENST00000545964 IRX5P78411 483 aaPredicted RBP8.08□□□□□ -1.12
MDM1-215ENST00000545964 DCAF1Q9Y4B6 1507 aa8.08□□□□□ -1.12
MDM1-215ENST00000545964 CC2D2AQ9P2K1 1620 aa8.05□□□□□ -1.12
MDM1-215ENST00000545964 IFNL1Q8IU54 200 aa8.05□□□□□ -1.12
MDM1-215ENST00000545964 L3MBTL3Q96JM7 780 aaPredicted RBP8.03□□□□□ -1.12
MDM1-215ENST00000545964 EMP3P54852 163 aa8.02□□□□□ -1.13
MDM1-215ENST00000545964 C3orf67Q6ZVT6 689 aa8.01□□□□□ -1.13
MDM1-215ENST00000545964 EIF4G1Q04637 1599 aaKnown RBP8.01□□□□□ -1.13
MDM1-215ENST00000545964 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
MDM1-215ENST00000545964 NUBP1P53384 320 aa8□□□□□ -1.13
MDM1-215ENST00000545964 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
MDM1-215ENST00000545964 GOLGA2Q08379 1002 aa7.97□□□□□ -1.13
MDM1-215ENST00000545964 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
MDM1-215ENST00000545964 HS3ST6Q96QI5 342 aa7.93□□□□□ -1.14
MDM1-215ENST00000545964 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
MDM1-215ENST00000545964 DCAF8Q5TAQ9 597 aa7.9□□□□□ -1.14
MDM1-215ENST00000545964 G3V3G9 751 aa7.89□□□□□ -1.15
MDM1-215ENST00000545964 ZNF467Q7Z7K2 595 aaPredicted RBP7.89□□□□□ -1.15
MDM1-215ENST00000545964 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
MDM1-215ENST00000545964 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
MDM1-215ENST00000545964 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
MDM1-215ENST00000545964 PTGER2P43116 358 aa7.85□□□□□ -1.15
MDM1-215ENST00000545964 PDCD7Q8N8D1 485 aaKnown RBP7.85□□□□□ -1.15
MDM1-215ENST00000545964 PYGBP11216 843 aa7.84□□□□□ -1.15
MDM1-215ENST00000545964 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
MDM1-215ENST00000545964 RNF166Q96A37 237 aaPredicted RBP7.84□□□□□ -1.15
MDM1-215ENST00000545964 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
MDM1-215ENST00000545964 GSE1Q14687 1217 aa7.83□□□□□ -1.16
MDM1-215ENST00000545964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
MDM1-215ENST00000545964 DOK7Q18PE1 504 aa7.82□□□□□ -1.16
MDM1-215ENST00000545964 PCDHB8Q9UN66 801 aa7.81□□□□□ -1.16
MDM1-215ENST00000545964 HOXB1P14653 301 aaPredicted RBP7.8□□□□□ -1.16
MDM1-215ENST00000545964 ERBB3P21860 1342 aa7.79□□□□□ -1.16
MDM1-215ENST00000545964 MYT1LQ9UL68 1186 aa7.78□□□□□ -1.16
MDM1-215ENST00000545964 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
MDM1-215ENST00000545964 ERCC6Q03468 1493 aa7.77□□□□□ -1.17
MDM1-215ENST00000545964 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
MDM1-215ENST00000545964 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
MDM1-215ENST00000545964 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
MDM1-215ENST00000545964 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
MDM1-215ENST00000545964 ATAD2BQ9ULI0 1458 aa7.75□□□□□ -1.17
MDM1-215ENST00000545964 ZSWIM6Q9HCJ5 1215 aa7.74□□□□□ -1.17
MDM1-215ENST00000545964 PSEN1P49768 467 aa7.73□□□□□ -1.17
MDM1-215ENST00000545964 ILDR1Q86SU0 546 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms