RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 BECN1Q14457 450 aa15.46■□□□□ 0.07
CIT-217ENST00000545913 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.06
CIT-217ENST00000545913 EEA1Q15075 1411 aa15.45■□□□□ 0.06
CIT-217ENST00000545913 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
CIT-217ENST00000545913 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
CIT-217ENST00000545913 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
CIT-217ENST00000545913 ARXQ96QS3 562 aa15.42■□□□□ 0.06
CIT-217ENST00000545913 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
CIT-217ENST00000545913 GOLGA6L22H0YM25 854 aa15.38■□□□□ 0.05
CIT-217ENST00000545913 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
CIT-217ENST00000545913 PPP1R15AO75807 674 aaPredicted RBP15.38■□□□□ 0.05
CIT-217ENST00000545913 TRIM44Q96DX7 344 aaPredicted RBP15.36■□□□□ 0.05
CIT-217ENST00000545913 NACADO15069 1562 aa15.35■□□□□ 0.05
CIT-217ENST00000545913 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
CIT-217ENST00000545913 A0A0G2JS52 829 aa15.35■□□□□ 0.05
CIT-217ENST00000545913 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
CIT-217ENST00000545913 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
CIT-217ENST00000545913 RRP7BPQ9NSQ0 103 aa15.33■□□□□ 0.05
CIT-217ENST00000545913 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
CIT-217ENST00000545913 MIER1Q8N108 512 aa15.32■□□□□ 0.04
CIT-217ENST00000545913 KNSTRNQ9Y448 316 aa15.31■□□□□ 0.04
CIT-217ENST00000545913 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
CIT-217ENST00000545913 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
CIT-217ENST00000545913 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
CIT-217ENST00000545913 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
CIT-217ENST00000545913 ZRSR1Q15695 479 aaKnown RBP15.29■□□□□ 0.04
CIT-217ENST00000545913 HIRIP3Q9BW71 556 aaPredicted RBP15.28■□□□□ 0.04
CIT-217ENST00000545913 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
CIT-217ENST00000545913 KIF27Q86VH2 1401 aa15.28■□□□□ 0.04
CIT-217ENST00000545913 CEP164Q9UPV0 1460 aa15.28■□□□□ 0.04
CIT-217ENST00000545913 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
CIT-217ENST00000545913 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
CIT-217ENST00000545913 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
CIT-217ENST00000545913 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
CIT-217ENST00000545913 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
CIT-217ENST00000545913 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.03
CIT-217ENST00000545913 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
CIT-217ENST00000545913 CARD11Q9BXL7 1154 aa15.2■□□□□ 0.02
CIT-217ENST00000545913 PTMAP06454 111 aaKnown RBP15.19■□□□□ 0.02
CIT-217ENST00000545913 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
CIT-217ENST00000545913 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
CIT-217ENST00000545913 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
CIT-217ENST00000545913 TNNT2P45379 298 aaPredicted RBP15.18■□□□□ 0.02
CIT-217ENST00000545913 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
CIT-217ENST00000545913 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
CIT-217ENST00000545913 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
CIT-217ENST00000545913 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
CIT-217ENST00000545913 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
CIT-217ENST00000545913 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
CIT-217ENST00000545913 MS4A1P11836 297 aa15.15■□□□□ 0.02
CIT-217ENST00000545913 DNTTIP2Q5QJE6 756 aaKnown RBP15.14■□□□□ 0.01
CIT-217ENST00000545913 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
CIT-217ENST00000545913 MYO15BQ96JP2 1530 aa15.13■□□□□ 0.01
CIT-217ENST00000545913 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
CIT-217ENST00000545913 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
CIT-217ENST00000545913 POGKQ9P215 609 aa15.11■□□□□ 0.01
CIT-217ENST00000545913 GOLGA6L6A8MZA4 724 aa15.1■□□□□ 0.01
CIT-217ENST00000545913 KANK1Q14678 1352 aa15.1■□□□□ 0.01
CIT-217ENST00000545913 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
CIT-217ENST00000545913 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
CIT-217ENST00000545913 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
CIT-217ENST00000545913 NEUROD2Q15784 382 aa15.07■□□□□ 0
CIT-217ENST00000545913 NPHP1O15259 732 aa15.06■□□□□ 0
CIT-217ENST00000545913 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
CIT-217ENST00000545913 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
CIT-217ENST00000545913 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
CIT-217ENST00000545913 FGD1P98174 961 aa15.05■□□□□ 0
CIT-217ENST00000545913 NRDCO43847 1150 aa15.05■□□□□ -0
CIT-217ENST00000545913 FRAT1Q92837 279 aaPredicted RBP15.04■□□□□ -0
CIT-217ENST00000545913 KCNJ4P48050 445 aa15.03■□□□□ -0
CIT-217ENST00000545913 TMF1P82094 1093 aa15.03■□□□□ -0
CIT-217ENST00000545913 CFAP44Q96MT7 982 aa15.02■□□□□ -0
CIT-217ENST00000545913 GOLGA2Q08379 1002 aa15.02■□□□□ -0
CIT-217ENST00000545913 RGS3P49796 1198 aa15.02□□□□□ -0.01
CIT-217ENST00000545913 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
CIT-217ENST00000545913 LMOD2Q6P5Q4 547 aa15.01□□□□□ -0.01
CIT-217ENST00000545913 CC2D1BQ5T0F9 858 aaKnown RBP15.01□□□□□ -0.01
CIT-217ENST00000545913 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
CIT-217ENST00000545913 HDGFP51858 240 aaKnown RBP15□□□□□ -0.01
CIT-217ENST00000545913 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
CIT-217ENST00000545913 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
CIT-217ENST00000545913 MCCP23508 829 aa14.98□□□□□ -0.01
CIT-217ENST00000545913 HSCBQ8IWL3 235 aa14.98□□□□□ -0.01
CIT-217ENST00000545913 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
CIT-217ENST00000545913 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
CIT-217ENST00000545913 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
CIT-217ENST00000545913 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.01
CIT-217ENST00000545913 NAP1L5Q96NT1 182 aaPredicted RBP14.96□□□□□ -0.01
CIT-217ENST00000545913 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
CIT-217ENST00000545913 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
CIT-217ENST00000545913 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
CIT-217ENST00000545913 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
CIT-217ENST00000545913 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
CIT-217ENST00000545913 CUX2O14529 1486 aa14.92□□□□□ -0.02
CIT-217ENST00000545913 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
CIT-217ENST00000545913 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
CIT-217ENST00000545913 TAOK2Q9UL54 1235 aa14.9□□□□□ -0.02
CIT-217ENST00000545913 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
CIT-217ENST00000545913 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
CIT-217ENST00000545913 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms