RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 LAS1LQ9Y4W2 734 aaKnown RBP18.57■□□□□ 0.56
RPS6KC1-206ENST00000543354 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
RPS6KC1-206ENST00000543354 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
RPS6KC1-206ENST00000543354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.554e-7■□□□□ 10.7
RPS6KC1-206ENST00000543354 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
RPS6KC1-206ENST00000543354 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
RPS6KC1-206ENST00000543354 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
RPS6KC1-206ENST00000543354 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.559e-6■■■■■ 50.1
RPS6KC1-206ENST00000543354 NACADO15069 1562 aa18.47■□□□□ 0.55
RPS6KC1-206ENST00000543354 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
RPS6KC1-206ENST00000543354 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
RPS6KC1-206ENST00000543354 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
RPS6KC1-206ENST00000543354 EEA1Q15075 1411 aa18.44■□□□□ 0.54
RPS6KC1-206ENST00000543354 UPF2Q9HAU5 1272 aaKnown RBP18.43■□□□□ 0.54
RPS6KC1-206ENST00000543354 NEFMP07197 916 aa18.42■□□□□ 0.54
RPS6KC1-206ENST00000543354 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
RPS6KC1-206ENST00000543354 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
RPS6KC1-206ENST00000543354 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
RPS6KC1-206ENST00000543354 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
RPS6KC1-206ENST00000543354 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
RPS6KC1-206ENST00000543354 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
RPS6KC1-206ENST00000543354 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
RPS6KC1-206ENST00000543354 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
RPS6KC1-206ENST00000543354 RGS3P49796 1198 aa18.34■□□□□ 0.53
RPS6KC1-206ENST00000543354 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
RPS6KC1-206ENST00000543354 ANP32BQ92688 251 aaKnown RBP18.3■□□□□ 0.52
RPS6KC1-206ENST00000543354 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
RPS6KC1-206ENST00000543354 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
RPS6KC1-206ENST00000543354 FOXD1Q16676 465 aa18.28■□□□□ 0.52
RPS6KC1-206ENST00000543354 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
RPS6KC1-206ENST00000543354 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
RPS6KC1-206ENST00000543354 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
RPS6KC1-206ENST00000543354 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
RPS6KC1-206ENST00000543354 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
RPS6KC1-206ENST00000543354 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
RPS6KC1-206ENST00000543354 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
RPS6KC1-206ENST00000543354 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
RPS6KC1-206ENST00000543354 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
RPS6KC1-206ENST00000543354 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
RPS6KC1-206ENST00000543354 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
RPS6KC1-206ENST00000543354 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
RPS6KC1-206ENST00000543354 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
RPS6KC1-206ENST00000543354 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
RPS6KC1-206ENST00000543354 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
RPS6KC1-206ENST00000543354 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
RPS6KC1-206ENST00000543354 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
RPS6KC1-206ENST00000543354 BECN1Q14457 450 aa18.13■□□□□ 0.49
RPS6KC1-206ENST00000543354 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
RPS6KC1-206ENST00000543354 WIZO95785 1651 aa18.11■□□□□ 0.49
RPS6KC1-206ENST00000543354 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
RPS6KC1-206ENST00000543354 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
RPS6KC1-206ENST00000543354 TRIM44Q96DX7 344 aaPredicted RBP18.09■□□□□ 0.49
RPS6KC1-206ENST00000543354 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
RPS6KC1-206ENST00000543354 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
RPS6KC1-206ENST00000543354 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.49
RPS6KC1-206ENST00000543354 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
RPS6KC1-206ENST00000543354 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.48
RPS6KC1-206ENST00000543354 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
RPS6KC1-206ENST00000543354 TPRNQ4KMQ1 711 aa18.06■□□□□ 0.48
RPS6KC1-206ENST00000543354 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
RPS6KC1-206ENST00000543354 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
RPS6KC1-206ENST00000543354 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
RPS6KC1-206ENST00000543354 L3MBTL2Q969R5 705 aa18.01■□□□□ 0.47
RPS6KC1-206ENST00000543354 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
RPS6KC1-206ENST00000543354 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
RPS6KC1-206ENST00000543354 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
RPS6KC1-206ENST00000543354 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
RPS6KC1-206ENST00000543354 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
RPS6KC1-206ENST00000543354 MSH5O43196 834 aa17.98■□□□□ 0.47
RPS6KC1-206ENST00000543354 CARMIL1Q5VZK9 1371 aa17.98■□□□□ 0.47
RPS6KC1-206ENST00000543354 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
RPS6KC1-206ENST00000543354 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
RPS6KC1-206ENST00000543354 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
RPS6KC1-206ENST00000543354 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
RPS6KC1-206ENST00000543354 GZF1Q9H116 711 aaPredicted RBP17.96■□□□□ 0.47
RPS6KC1-206ENST00000543354 FTSJ3Q8IY81 847 aaKnown RBP17.95■□□□□ 0.46
RPS6KC1-206ENST00000543354 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
RPS6KC1-206ENST00000543354 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
RPS6KC1-206ENST00000543354 CUX2O14529 1486 aa17.93■□□□□ 0.46
RPS6KC1-206ENST00000543354 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
RPS6KC1-206ENST00000543354 PKD2Q13563 968 aa17.92■□□□□ 0.46
RPS6KC1-206ENST00000543354 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
RPS6KC1-206ENST00000543354 PLIN1O60240 522 aa17.89■□□□□ 0.46
RPS6KC1-206ENST00000543354 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
RPS6KC1-206ENST00000543354 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
RPS6KC1-206ENST00000543354 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
RPS6KC1-206ENST00000543354 PLEKHG5O94827 1062 aa17.88■□□□□ 0.45
RPS6KC1-206ENST00000543354 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
RPS6KC1-206ENST00000543354 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
RPS6KC1-206ENST00000543354 PTMAP06454 111 aaKnown RBP17.84■□□□□ 0.45
RPS6KC1-206ENST00000543354 DNTTIP2Q5QJE6 756 aaKnown RBP17.84■□□□□ 0.45
RPS6KC1-206ENST00000543354 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
RPS6KC1-206ENST00000543354 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.45
RPS6KC1-206ENST00000543354 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
RPS6KC1-206ENST00000543354 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
RPS6KC1-206ENST00000543354 PLCB2Q00722 1185 aa17.82■□□□□ 0.44
RPS6KC1-206ENST00000543354 PDE4AP27815 886 aa17.81■□□□□ 0.44
RPS6KC1-206ENST00000543354 PRKCSHP14314 528 aaPredicted RBP17.81■□□□□ 0.44
RPS6KC1-206ENST00000543354 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
RPS6KC1-206ENST00000543354 ARID3AQ99856 593 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms