RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 LHX8Q68G74 356 aa9.61□□□□□ -0.87
DDB1-219ENST00000541513 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
DDB1-219ENST00000541513 OSCARQ8IYS5 282 aa9.58□□□□□ -0.88
DDB1-219ENST00000541513 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
DDB1-219ENST00000541513 PLSCR2Q9NRY7 297 aa9.56□□□□□ -0.88
DDB1-219ENST00000541513 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
DDB1-219ENST00000541513 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
DDB1-219ENST00000541513 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
DDB1-219ENST00000541513 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
DDB1-219ENST00000541513 GABBR2O75899 941 aa9.48□□□□□ -0.89
DDB1-219ENST00000541513 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
DDB1-219ENST00000541513 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
DDB1-219ENST00000541513 RGL2O15211 777 aa9.45□□□□□ -0.9
DDB1-219ENST00000541513 UBTFP17480 764 aaKnown RBP9.45□□□□□ -0.9
DDB1-219ENST00000541513 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
DDB1-219ENST00000541513 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
DDB1-219ENST00000541513 HRCP23327 699 aa9.4□□□□□ -0.9
DDB1-219ENST00000541513 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
DDB1-219ENST00000541513 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
DDB1-219ENST00000541513 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
DDB1-219ENST00000541513 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
DDB1-219ENST00000541513 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
DDB1-219ENST00000541513 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
DDB1-219ENST00000541513 MYT1Q01538 1121 aa9.27□□□□□ -0.93
DDB1-219ENST00000541513 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
DDB1-219ENST00000541513 ABCC9O60706 1549 aa9.22□□□□□ -0.93
DDB1-219ENST00000541513 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
DDB1-219ENST00000541513 LMOD2Q6P5Q4 547 aa9.21□□□□□ -0.94
DDB1-219ENST00000541513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDB1-219ENST00000541513 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
DDB1-219ENST00000541513 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 P3H3Q8IVL6 736 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
DDB1-219ENST00000541513 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
DDB1-219ENST00000541513 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
DDB1-219ENST00000541513 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
DDB1-219ENST00000541513 GTPBP6O43824 516 aaPredicted RBP9.13□□□□□ -0.95
DDB1-219ENST00000541513 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
DDB1-219ENST00000541513 ZBTB7CA1YPR0 619 aa9.12□□□□□ -0.95
DDB1-219ENST00000541513 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
DDB1-219ENST00000541513 POTEMA6NI47 508 aa9.1□□□□□ -0.95
DDB1-219ENST00000541513 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
DDB1-219ENST00000541513 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
DDB1-219ENST00000541513 STAG3Q9UJ98 1225 aa9.06□□□□□ -0.96
DDB1-219ENST00000541513 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
DDB1-219ENST00000541513 ZCCHC6Q5VYS8 1495 aaKnown RBP9.05□□□□□ -0.96
DDB1-219ENST00000541513 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
DDB1-219ENST00000541513 POTEGQ6S5H5 508 aa9.05□□□□□ -0.96
DDB1-219ENST00000541513 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
DDB1-219ENST00000541513 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
DDB1-219ENST00000541513 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
DDB1-219ENST00000541513 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
DDB1-219ENST00000541513 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
DDB1-219ENST00000541513 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
DDB1-219ENST00000541513 NACADO15069 1562 aa9.01□□□□□ -0.97
DDB1-219ENST00000541513 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
DDB1-219ENST00000541513 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
DDB1-219ENST00000541513 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
DDB1-219ENST00000541513 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
DDB1-219ENST00000541513 DCBLD2Q96PD2 775 aa9□□□□□ -0.97
DDB1-219ENST00000541513 KCNV2Q8TDN2 545 aa8.99□□□□□ -0.97
DDB1-219ENST00000541513 ARID3AQ99856 593 aa8.99□□□□□ -0.97
DDB1-219ENST00000541513 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
DDB1-219ENST00000541513 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
DDB1-219ENST00000541513 RNF25Q96BH1 459 aaPredicted RBP8.98□□□□□ -0.97
DDB1-219ENST00000541513 CLCN6P51797 869 aa8.96□□□□□ -0.98
DDB1-219ENST00000541513 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
DDB1-219ENST00000541513 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
DDB1-219ENST00000541513 PABPN1Q86U42 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
DDB1-219ENST00000541513 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
DDB1-219ENST00000541513 SHROOM4Q9ULL8 1493 aa8.92□□□□□ -0.98
DDB1-219ENST00000541513 ZMYND10O75800 440 aa8.9□□□□□ -0.98
DDB1-219ENST00000541513 ZNF579Q8NAF0 562 aaKnown RBP8.9□□□□□ -0.98
DDB1-219ENST00000541513 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
DDB1-219ENST00000541513 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
DDB1-219ENST00000541513 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
DDB1-219ENST00000541513 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
DDB1-219ENST00000541513 MIER1Q8N108 512 aa8.88□□□□□ -0.99
DDB1-219ENST00000541513 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
DDB1-219ENST00000541513 APBB1O00213 710 aa8.86□□□□□ -0.99
DDB1-219ENST00000541513 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
DDB1-219ENST00000541513 EIF5BO60841 1220 aaKnown RBP8.85□□□□□ -0.99
DDB1-219ENST00000541513 IGSF3O75054 1194 aa8.85□□□□□ -0.99
DDB1-219ENST00000541513 HMGB1P09429 215 aaKnown RBP8.85□□□□□ -0.99
DDB1-219ENST00000541513 KCTD17Q8N5Z5 321 aa8.84□□□□□ -0.99
DDB1-219ENST00000541513 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
DDB1-219ENST00000541513 TRAIPQ9BWF2 469 aa8.84□□□□□ -0.99
DDB1-219ENST00000541513 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
DDB1-219ENST00000541513 ARID3CA6NKF2 412 aa8.83□□□□□ -1
DDB1-219ENST00000541513 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
DDB1-219ENST00000541513 STK25O00506 426 aa8.82□□□□□ -1
DDB1-219ENST00000541513 GSE1Q14687 1217 aa8.82□□□□□ -1
DDB1-219ENST00000541513 RGS22Q8NE09 1264 aa8.82□□□□□ -1
DDB1-219ENST00000541513 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
DDB1-219ENST00000541513 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
DDB1-219ENST00000541513 POTEJP0CG39 1038 aa8.81□□□□□ -1
DDB1-219ENST00000541513 BARGINQ6ZT62 677 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms