RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 KANK4Q5T7N3 995 aaPredicted RBP16.43■□□□□ 0.22
CX3CR1-205ENST00000541347 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
CX3CR1-205ENST00000541347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
CX3CR1-205ENST00000541347 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
CX3CR1-205ENST00000541347 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
CX3CR1-205ENST00000541347 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
CX3CR1-205ENST00000541347 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
CX3CR1-205ENST00000541347 GRIN2BQ13224 1484 aa16.38■□□□□ 0.21
CX3CR1-205ENST00000541347 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
CX3CR1-205ENST00000541347 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
CX3CR1-205ENST00000541347 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
CX3CR1-205ENST00000541347 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
CX3CR1-205ENST00000541347 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
CX3CR1-205ENST00000541347 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.21
CX3CR1-205ENST00000541347 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
CX3CR1-205ENST00000541347 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
CX3CR1-205ENST00000541347 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
CX3CR1-205ENST00000541347 FYCO1Q9BQS8 1478 aa16.29■□□□□ 0.2
CX3CR1-205ENST00000541347 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
CX3CR1-205ENST00000541347 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
CX3CR1-205ENST00000541347 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.2
CX3CR1-205ENST00000541347 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
CX3CR1-205ENST00000541347 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CX3CR1-205ENST00000541347 CFAP43Q8NDM7 1665 aa16.26■□□□□ 0.19
CX3CR1-205ENST00000541347 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
CX3CR1-205ENST00000541347 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
CX3CR1-205ENST00000541347 CCNB3Q8WWL7 1395 aa16.21■□□□□ 0.19
CX3CR1-205ENST00000541347 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
CX3CR1-205ENST00000541347 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
CX3CR1-205ENST00000541347 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
CX3CR1-205ENST00000541347 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
CX3CR1-205ENST00000541347 UGGT2Q9NYU1 1516 aa16.17■□□□□ 0.18
CX3CR1-205ENST00000541347 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
CX3CR1-205ENST00000541347 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
CX3CR1-205ENST00000541347 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
CX3CR1-205ENST00000541347 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
CX3CR1-205ENST00000541347 DISP1Q96F81 1524 aa16.1■□□□□ 0.17
CX3CR1-205ENST00000541347 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
CX3CR1-205ENST00000541347 KIAA0556O60303 1618 aa16.08■□□□□ 0.17
CX3CR1-205ENST00000541347 FBLN2P98095 1184 aa16.08■□□□□ 0.17
CX3CR1-205ENST00000541347 ITGAEP38570 1179 aa16.07■□□□□ 0.16
CX3CR1-205ENST00000541347 HECW1Q76N89 1606 aa16.07■□□□□ 0.16
CX3CR1-205ENST00000541347 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
CX3CR1-205ENST00000541347 NUP160Q12769 1436 aa16.06■□□□□ 0.16
CX3CR1-205ENST00000541347 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
CX3CR1-205ENST00000541347 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
CX3CR1-205ENST00000541347 EPRSP07814 1512 aaKnown RBP16.03■□□□□ 0.16
CX3CR1-205ENST00000541347 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.16
CX3CR1-205ENST00000541347 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
CX3CR1-205ENST00000541347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.15
CX3CR1-205ENST00000541347 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
CX3CR1-205ENST00000541347 FGD6Q6ZV73 1430 aa16.01■□□□□ 0.15
CX3CR1-205ENST00000541347 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
CX3CR1-205ENST00000541347 CDK13Q14004 1512 aaKnown RBP15.99■□□□□ 0.15
CX3CR1-205ENST00000541347 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
CX3CR1-205ENST00000541347 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
CX3CR1-205ENST00000541347 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
CX3CR1-205ENST00000541347 RAB3GAP2Q9H2M9 1393 aa15.96■□□□□ 0.15
CX3CR1-205ENST00000541347 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
CX3CR1-205ENST00000541347 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
CX3CR1-205ENST00000541347 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
CX3CR1-205ENST00000541347 NUP153P49790 1475 aaKnown RBP15.95■□□□□ 0.14
CX3CR1-205ENST00000541347 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
CX3CR1-205ENST00000541347 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
CX3CR1-205ENST00000541347 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
CX3CR1-205ENST00000541347 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
CX3CR1-205ENST00000541347 CHD1O14646 1710 aa15.89■□□□□ 0.13
CX3CR1-205ENST00000541347 PTPRKQ15262 1439 aa15.87■□□□□ 0.13
CX3CR1-205ENST00000541347 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
CX3CR1-205ENST00000541347 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
CX3CR1-205ENST00000541347 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
CX3CR1-205ENST00000541347 MIA2Q96PC5 1412 aa15.84■□□□□ 0.13
CX3CR1-205ENST00000541347 ABCA8O94911 1581 aa15.83■□□□□ 0.12
CX3CR1-205ENST00000541347 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
CX3CR1-205ENST00000541347 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
CX3CR1-205ENST00000541347 TROQ12816 1431 aaPredicted RBP15.81■□□□□ 0.12
CX3CR1-205ENST00000541347 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
CX3CR1-205ENST00000541347 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
CX3CR1-205ENST00000541347 PTPRGP23470 1445 aa15.78■□□□□ 0.12
CX3CR1-205ENST00000541347 NAIPQ13075 1403 aa15.77■□□□□ 0.12
CX3CR1-205ENST00000541347 ATP10BO94823 1461 aa15.76■□□□□ 0.11
CX3CR1-205ENST00000541347 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
CX3CR1-205ENST00000541347 KIF14Q15058 1648 aa15.73■□□□□ 0.11
CX3CR1-205ENST00000541347 CHIC2Q9UKJ5 165 aa15.73■□□□□ 0.11
CX3CR1-205ENST00000541347 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
CX3CR1-205ENST00000541347 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
CX3CR1-205ENST00000541347 ZNF644Q9H582 1327 aaPredicted RBP15.72■□□□□ 0.11
CX3CR1-205ENST00000541347 AKNAQ7Z591 1439 aa15.71■□□□□ 0.11
CX3CR1-205ENST00000541347 RRP7BPQ9NSQ0 103 aa15.71■□□□□ 0.11
CX3CR1-205ENST00000541347 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
CX3CR1-205ENST00000541347 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
CX3CR1-205ENST00000541347 UACAQ9BZF9 1416 aa15.7■□□□□ 0.1
CX3CR1-205ENST00000541347 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
CX3CR1-205ENST00000541347 DAPK1P53355 1430 aa15.7■□□□□ 0.1
CX3CR1-205ENST00000541347 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
CX3CR1-205ENST00000541347 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
CX3CR1-205ENST00000541347 DNMT1P26358 1616 aaKnown RBP15.69■□□□□ 0.1
CX3CR1-205ENST00000541347 CFDP1Q9UEE9 299 aaPredicted RBP15.69■□□□□ 0.1
CX3CR1-205ENST00000541347 ABCC5O15440 1437 aa15.68■□□□□ 0.1
CX3CR1-205ENST00000541347 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms