RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
STRC-213ENST00000541030 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
STRC-213ENST00000541030 ARXQ96QS3 562 aa16.41■□□□□ 0.22
STRC-213ENST00000541030 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
STRC-213ENST00000541030 CLIP1P30622 1438 aa16.39■□□□□ 0.21
STRC-213ENST00000541030 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
STRC-213ENST00000541030 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
STRC-213ENST00000541030 EEA1Q15075 1411 aa16.35■□□□□ 0.21
STRC-213ENST00000541030 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
STRC-213ENST00000541030 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
STRC-213ENST00000541030 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
STRC-213ENST00000541030 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
STRC-213ENST00000541030 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
STRC-213ENST00000541030 GOLGA3Q08378 1498 aa16.27■□□□□ 0.19
STRC-213ENST00000541030 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
STRC-213ENST00000541030 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
STRC-213ENST00000541030 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
STRC-213ENST00000541030 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
STRC-213ENST00000541030 ZRSR1Q15695 479 aaKnown RBP16.23■□□□□ 0.19
STRC-213ENST00000541030 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
STRC-213ENST00000541030 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
STRC-213ENST00000541030 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
STRC-213ENST00000541030 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
STRC-213ENST00000541030 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
STRC-213ENST00000541030 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
STRC-213ENST00000541030 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
STRC-213ENST00000541030 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
STRC-213ENST00000541030 GOLGA6L6A8MZA4 724 aa16.16■□□□□ 0.18
STRC-213ENST00000541030 MS4A1P11836 297 aa16.16■□□□□ 0.18
STRC-213ENST00000541030 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
STRC-213ENST00000541030 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
STRC-213ENST00000541030 DNTTIP2Q5QJE6 756 aaKnown RBP16.15■□□□□ 0.18
STRC-213ENST00000541030 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
STRC-213ENST00000541030 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
STRC-213ENST00000541030 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
STRC-213ENST00000541030 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
STRC-213ENST00000541030 NRDCO43847 1150 aa16.12■□□□□ 0.17
STRC-213ENST00000541030 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
STRC-213ENST00000541030 RGL3Q3MIN7 710 aa16.09■□□□□ 0.17
STRC-213ENST00000541030 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
STRC-213ENST00000541030 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
STRC-213ENST00000541030 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
STRC-213ENST00000541030 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
STRC-213ENST00000541030 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
STRC-213ENST00000541030 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
STRC-213ENST00000541030 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
STRC-213ENST00000541030 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
STRC-213ENST00000541030 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
STRC-213ENST00000541030 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
STRC-213ENST00000541030 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
STRC-213ENST00000541030 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
STRC-213ENST00000541030 RGS3P49796 1198 aa16.03■□□□□ 0.16
STRC-213ENST00000541030 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
STRC-213ENST00000541030 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
STRC-213ENST00000541030 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
STRC-213ENST00000541030 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
STRC-213ENST00000541030 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
STRC-213ENST00000541030 A0A0G2JS52 829 aa16■□□□□ 0.15
STRC-213ENST00000541030 KCNH8Q96L42 1107 aa16■□□□□ 0.15
STRC-213ENST00000541030 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
STRC-213ENST00000541030 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
STRC-213ENST00000541030 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
STRC-213ENST00000541030 TMF1P82094 1093 aa15.96■□□□□ 0.14
STRC-213ENST00000541030 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
STRC-213ENST00000541030 SIN3AQ96ST3 1273 aa15.94■□□□□ 0.14
STRC-213ENST00000541030 B4GALNT3Q6L9W6 998 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 POGKQ9P215 609 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 FGD1P98174 961 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 PTMSP20962 102 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
STRC-213ENST00000541030 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
STRC-213ENST00000541030 MCCP23508 829 aa15.92■□□□□ 0.14
STRC-213ENST00000541030 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
STRC-213ENST00000541030 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
STRC-213ENST00000541030 NACADO15069 1562 aa15.92■□□□□ 0.14
STRC-213ENST00000541030 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
STRC-213ENST00000541030 KCNJ4P48050 445 aa15.91■□□□□ 0.14
STRC-213ENST00000541030 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
STRC-213ENST00000541030 TPRNQ4KMQ1 711 aa15.91■□□□□ 0.14
STRC-213ENST00000541030 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
STRC-213ENST00000541030 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
STRC-213ENST00000541030 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
STRC-213ENST00000541030 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
STRC-213ENST00000541030 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
STRC-213ENST00000541030 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
STRC-213ENST00000541030 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
STRC-213ENST00000541030 RBM19Q9Y4C8 960 aaKnown RBP15.85■□□□□ 0.13
STRC-213ENST00000541030 KANK1Q14678 1352 aa15.84■□□□□ 0.13
STRC-213ENST00000541030 GBP4Q96PP9 640 aa15.83■□□□□ 0.12
STRC-213ENST00000541030 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
STRC-213ENST00000541030 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
STRC-213ENST00000541030 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
STRC-213ENST00000541030 SETD5Q9C0A6 1442 aa15.81■□□□□ 0.12
STRC-213ENST00000541030 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
STRC-213ENST00000541030 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
STRC-213ENST00000541030 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
STRC-213ENST00000541030 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
STRC-213ENST00000541030 NAP1L2Q9ULW6 460 aaPredicted RBP15.79■□□□□ 0.12
STRC-213ENST00000541030 USP35Q9P2H5 1018 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms