RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
SSH2-204ENST00000540801 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
SSH2-204ENST00000540801 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
SSH2-204ENST00000540801 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
SSH2-204ENST00000540801 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
SSH2-204ENST00000540801 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
SSH2-204ENST00000540801 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
SSH2-204ENST00000540801 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
SSH2-204ENST00000540801 MIER1Q8N108 512 aa9.59□□□□□ -0.87
SSH2-204ENST00000540801 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
SSH2-204ENST00000540801 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
SSH2-204ENST00000540801 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
SSH2-204ENST00000540801 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
SSH2-204ENST00000540801 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
SSH2-204ENST00000540801 CARMIL1Q5VZK9 1371 aa9.53□□□□□ -0.88
SSH2-204ENST00000540801 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
SSH2-204ENST00000540801 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
SSH2-204ENST00000540801 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
SSH2-204ENST00000540801 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
SSH2-204ENST00000540801 ARHGEF11O15085 1522 aa9.5□□□□□ -0.89
SSH2-204ENST00000540801 ZEB1P37275 1124 aaPredicted RBP9.5□□□□□ -0.89
SSH2-204ENST00000540801 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
SSH2-204ENST00000540801 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
SSH2-204ENST00000540801 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
SSH2-204ENST00000540801 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
SSH2-204ENST00000540801 CUL7Q14999 1698 aa9.46□□□□□ -0.89
SSH2-204ENST00000540801 SIN3AQ96ST3 1273 aa9.45□□□□□ -0.9
SSH2-204ENST00000540801 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
SSH2-204ENST00000540801 SUPT6HQ7KZ85 1726 aaKnown RBP9.44□□□□□ -0.9
SSH2-204ENST00000540801 ZNF316A6NFI3 1004 aaPredicted RBP9.43□□□□□ -0.9
SSH2-204ENST00000540801 CDK13Q14004 1512 aaKnown RBP9.42□□□□□ -0.9
SSH2-204ENST00000540801 ADAMTS12P58397 1594 aa9.41□□□□□ -0.9
SSH2-204ENST00000540801 GTF3C3Q9Y5Q9 886 aa9.4□□□□□ -0.9
SSH2-204ENST00000540801 THOC2Q8NI27 1593 aaKnown RBP9.4□□□□□ -0.9
SSH2-204ENST00000540801 DISP1Q96F81 1524 aa9.4□□□□□ -0.9
SSH2-204ENST00000540801 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
SSH2-204ENST00000540801 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
SSH2-204ENST00000540801 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
SSH2-204ENST00000540801 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
SSH2-204ENST00000540801 FYCO1Q9BQS8 1478 aa9.38□□□□□ -0.91
SSH2-204ENST00000540801 UGGT2Q9NYU1 1516 aa9.38□□□□□ -0.91
SSH2-204ENST00000540801 ITGAEP38570 1179 aa9.38□□□□□ -0.91
SSH2-204ENST00000540801 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
SSH2-204ENST00000540801 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
SSH2-204ENST00000540801 WDR62O43379 1518 aa9.35□□□□□ -0.91
SSH2-204ENST00000540801 NAIPQ13075 1403 aa9.35□□□□□ -0.91
SSH2-204ENST00000540801 KIF14Q15058 1648 aa9.35□□□□□ -0.91
SSH2-204ENST00000540801 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
SSH2-204ENST00000540801 GCC2Q8IWJ2 1684 aa9.34□□□□□ -0.91
SSH2-204ENST00000540801 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
SSH2-204ENST00000540801 FGD6Q6ZV73 1430 aa9.33□□□□□ -0.92
SSH2-204ENST00000540801 NCOA2Q15596 1464 aa9.33□□□□□ -0.92
SSH2-204ENST00000540801 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
SSH2-204ENST00000540801 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SSH2-204ENST00000540801 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
SSH2-204ENST00000540801 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
SSH2-204ENST00000540801 BCORL1Q5H9F3 1711 aa9.3□□□□□ -0.92
SSH2-204ENST00000540801 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SSH2-204ENST00000540801 PPP1R15AO75807 674 aaPredicted RBP9.3□□□□□ -0.92
SSH2-204ENST00000540801 KIAA0556O60303 1618 aa9.29□□□□□ -0.92
SSH2-204ENST00000540801 CDC42BPAQ5VT25 1732 aa9.29□□□□□ -0.92
SSH2-204ENST00000540801 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
SSH2-204ENST00000540801 EPRSP07814 1512 aaKnown RBP9.29□□□□□ -0.92
SSH2-204ENST00000540801 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
SSH2-204ENST00000540801 CCDC184Q52MB2 194 aa9.28□□□□□ -0.92
SSH2-204ENST00000540801 TCOF1Q13428 1488 aaKnown RBP9.27□□□□□ -0.93
SSH2-204ENST00000540801 FOXD1Q16676 465 aa9.26□□□□□ -0.93
SSH2-204ENST00000540801 HFM1A2PYH4 1435 aa9.26□□□□□ -0.93
SSH2-204ENST00000540801 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
SSH2-204ENST00000540801 CROCC2H7BZ55 1655 aa9.25□□□□□ -0.93
SSH2-204ENST00000540801 PLB1Q6P1J6 1458 aa9.25□□□□□ -0.93
SSH2-204ENST00000540801 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
SSH2-204ENST00000540801 CCDC18Q5T9S5 1454 aa9.25□□□□□ -0.93
SSH2-204ENST00000540801 CDC42BPBQ9Y5S2 1711 aa9.23□□□□□ -0.93
SSH2-204ENST00000540801 MYOM3Q5VTT5 1437 aa9.23□□□□□ -0.93
SSH2-204ENST00000540801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.22□□□□□ -0.93
SSH2-204ENST00000540801 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.94
SSH2-204ENST00000540801 DNMT1P26358 1616 aaKnown RBP9.21□□□□□ -0.94
SSH2-204ENST00000540801 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.94
SSH2-204ENST00000540801 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
SSH2-204ENST00000540801 POLR1AO95602 1720 aaPredicted RBP9.2□□□□□ -0.94
SSH2-204ENST00000540801 RAPGEF6Q8TEU7 1601 aa9.2□□□□□ -0.94
SSH2-204ENST00000540801 PRG4Q92954 1404 aaPredicted RBP9.2□□□□□ -0.94
SSH2-204ENST00000540801 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 PZPP20742 1482 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 CLSPNQ9HAW4 1339 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 ABCA8O94911 1581 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 GRIN2AQ12879 1464 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 ABCC5O15440 1437 aa9.19□□□□□ -0.94
SSH2-204ENST00000540801 ADCY10Q96PN6 1610 aa9.18□□□□□ -0.94
SSH2-204ENST00000540801 FAM50AQ14320 339 aaKnown RBP9.18□□□□□ -0.94
SSH2-204ENST00000540801 SPATA31E1Q6ZUB1 1445 aa9.17□□□□□ -0.94
SSH2-204ENST00000540801 CHD1O14646 1710 aa9.17□□□□□ -0.94
SSH2-204ENST00000540801 UACAQ9BZF9 1416 aa9.17□□□□□ -0.94
SSH2-204ENST00000540801 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
SSH2-204ENST00000540801 WASHC2AQ641Q2 1341 aa9.16□□□□□ -0.94
SSH2-204ENST00000540801 MBD5Q9P267 1494 aa9.16□□□□□ -0.94
SSH2-204ENST00000540801 CHIC2Q9UKJ5 165 aa9.15□□□□□ -0.94
SSH2-204ENST00000540801 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms