RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 FANCIQ9NVI1 1328 aa15.01□□□□□ -0.01
PBX1-212ENST00000540236 HSP90AA1P07900 732 aaKnown RBP15□□□□□ -0.01
PBX1-212ENST00000540236 SLC4A3P48751 1232 aa14.99□□□□□ -0.01
PBX1-212ENST00000540236 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
PBX1-212ENST00000540236 IPO9Q96P70 1041 aaKnown RBP14.96□□□□□ -0.01
PBX1-212ENST00000540236 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
PBX1-212ENST00000540236 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
PBX1-212ENST00000540236 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
PBX1-212ENST00000540236 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
PBX1-212ENST00000540236 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
PBX1-212ENST00000540236 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
PBX1-212ENST00000540236 MRS2Q9HD23 443 aa14.87□□□□□ -0.03
PBX1-212ENST00000540236 ZNF326Q5BKZ1 582 aaKnown RBP14.86□□□□□ -0.03
PBX1-212ENST00000540236 ZMYND15Q9H091 742 aa14.86□□□□□ -0.03
PBX1-212ENST00000540236 GZF1Q9H116 711 aaPredicted RBP14.85□□□□□ -0.03
PBX1-212ENST00000540236 GSE1Q14687 1217 aa14.82□□□□□ -0.04
PBX1-212ENST00000540236 FRAT1Q92837 279 aaPredicted RBP14.81□□□□□ -0.04
PBX1-212ENST00000540236 DDRGK1Q96HY6 314 aa14.79□□□□□ -0.04
PBX1-212ENST00000540236 TRIM44Q96DX7 344 aaPredicted RBP14.78□□□□□ -0.04
PBX1-212ENST00000540236 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
PBX1-212ENST00000540236 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
PBX1-212ENST00000540236 RGS3P49796 1198 aa14.71□□□□□ -0.06
PBX1-212ENST00000540236 C11orf95C9JLR9 678 aaPredicted RBP14.69□□□□□ -0.06
PBX1-212ENST00000540236 SLKQ9H2G2 1235 aaPredicted RBP14.68□□□□□ -0.06
PBX1-212ENST00000540236 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
PBX1-212ENST00000540236 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
PBX1-212ENST00000540236 USP35Q9P2H5 1018 aa14.67□□□□□ -0.06
PBX1-212ENST00000540236 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
PBX1-212ENST00000540236 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
PBX1-212ENST00000540236 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
PBX1-212ENST00000540236 CDK11BP21127 795 aaKnown RBP14.64□□□□□ -0.07
PBX1-212ENST00000540236 RBM10P98175 930 aaKnown RBP14.63□□□□□ -0.07
PBX1-212ENST00000540236 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
PBX1-212ENST00000540236 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
PBX1-212ENST00000540236 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
PBX1-212ENST00000540236 PDE4CQ08493 712 aa14.59□□□□□ -0.07
PBX1-212ENST00000540236 P3H3Q8IVL6 736 aa14.58□□□□□ -0.08
PBX1-212ENST00000540236 PDE4AP27815 886 aa14.57□□□□□ -0.08
PBX1-212ENST00000540236 CCER2I3L3R5 266 aa14.57□□□□□ -0.08
PBX1-212ENST00000540236 DNTTIP2Q5QJE6 756 aaKnown RBP14.56□□□□□ -0.08
PBX1-212ENST00000540236 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
PBX1-212ENST00000540236 L1TD1Q5T7N2 865 aaKnown RBP14.56□□□□□ -0.08
PBX1-212ENST00000540236 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
PBX1-212ENST00000540236 FAM13BQ9NYF5 915 aa14.55□□□□□ -0.08
PBX1-212ENST00000540236 SKAP1Q86WV1 359 aa14.54□□□□□ -0.08
PBX1-212ENST00000540236 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
PBX1-212ENST00000540236 GOLGA6L3A6NEY3 463 aa14.52□□□□□ -0.09
PBX1-212ENST00000540236 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.09
PBX1-212ENST00000540236 BECN1Q14457 450 aa14.49□□□□□ -0.09
PBX1-212ENST00000540236 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
PBX1-212ENST00000540236 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
PBX1-212ENST00000540236 EXOC6Q8TAG9 804 aa14.48□□□□□ -0.09
PBX1-212ENST00000540236 PLIN1O60240 522 aa14.47□□□□□ -0.09
PBX1-212ENST00000540236 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
PBX1-212ENST00000540236 ZHX1Q9UKY1 873 aaPredicted RBP14.46□□□□□ -0.09
PBX1-212ENST00000540236 DHX57Q6P158 1386 aaKnown RBP14.44□□□□□ -0.1
PBX1-212ENST00000540236 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
PBX1-212ENST00000540236 PTMAP06454 111 aaKnown RBP14.43□□□□□ -0.1
PBX1-212ENST00000540236 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
PBX1-212ENST00000540236 TCERG1O14776 1098 aaKnown RBP14.41□□□□□ -0.1
PBX1-212ENST00000540236 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
PBX1-212ENST00000540236 CHIC2Q9UKJ5 165 aa14.41□□□□□ -0.1
PBX1-212ENST00000540236 CLIP1P30622 1438 aa14.41□□□□□ -0.1
PBX1-212ENST00000540236 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
PBX1-212ENST00000540236 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
PBX1-212ENST00000540236 AKNAQ7Z591 1439 aa14.38□□□□□ -0.11
PBX1-212ENST00000540236 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
PBX1-212ENST00000540236 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
PBX1-212ENST00000540236 PLCD3Q8N3E9 789 aa14.36□□□□□ -0.11
PBX1-212ENST00000540236 CCDC184Q52MB2 194 aa14.36□□□□□ -0.11
PBX1-212ENST00000540236 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
PBX1-212ENST00000540236 EIF4G2P78344 907 aaKnown RBP eCLIP14.35□□□□□ -0.11
PBX1-212ENST00000540236 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
PBX1-212ENST00000540236 POGKQ9P215 609 aa14.35□□□□□ -0.11
PBX1-212ENST00000540236 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
PBX1-212ENST00000540236 SOGA1O94964 1423 aa14.35□□□□□ -0.11
PBX1-212ENST00000540236 PLCB2Q00722 1185 aa14.34□□□□□ -0.11
PBX1-212ENST00000540236 R3HCC1Q9Y3T6 440 aaKnown RBP14.34□□□□□ -0.11
PBX1-212ENST00000540236 BBXQ8WY36 941 aaPredicted RBP14.34□□□□□ -0.11
PBX1-212ENST00000540236 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
PBX1-212ENST00000540236 NUDCQ9Y266 331 aa14.33□□□□□ -0.12
PBX1-212ENST00000540236 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
PBX1-212ENST00000540236 EEA1Q15075 1411 aa14.31□□□□□ -0.12
PBX1-212ENST00000540236 MYH16Q9H6N6 1097 aa14.3□□□□□ -0.12
PBX1-212ENST00000540236 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
PBX1-212ENST00000540236 RCAN3Q9UKA8 241 aa14.29□□□□□ -0.12
PBX1-212ENST00000540236 ZNF771Q7L3S4 317 aaPredicted RBP14.27□□□□□ -0.13
PBX1-212ENST00000540236 DCAF11Q8TEB1 546 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 SCRIBQ14160 1630 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 E9PSI1 815 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 CRBNQ96SW2 442 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 ABCC8Q09428 1581 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 VGLL3A8MV65 326 aa14.27□□□□□ -0.13
PBX1-212ENST00000540236 CHMP4BQ9H444 224 aaKnown RBP14.26□□□□□ -0.13
PBX1-212ENST00000540236 RRP7BPQ9NSQ0 103 aa14.25□□□□□ -0.13
PBX1-212ENST00000540236 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
PBX1-212ENST00000540236 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
PBX1-212ENST00000540236 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms