RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ARXQ96QS3 562 aa8.47□□□□□ -1.05
SNHG1-211ENST00000539921 EEA1Q15075 1411 aa8.46□□□□□ -1.05
SNHG1-211ENST00000539921 RANGAP1P46060 587 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-211ENST00000539921 CCER2I3L3R5 266 aa8.44□□□□□ -1.06
SNHG1-211ENST00000539921 ABCC9O60706 1549 aa8.44□□□□□ -1.06
SNHG1-211ENST00000539921 FAM43AQ8N2R8 423 aa8.43□□□□□ -1.06
SNHG1-211ENST00000539921 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
SNHG1-211ENST00000539921 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
SNHG1-211ENST00000539921 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
SNHG1-211ENST00000539921 FGD1P98174 961 aa8.41□□□□□ -1.06
SNHG1-211ENST00000539921 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-211ENST00000539921 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
SNHG1-211ENST00000539921 PDE4CQ08493 712 aa8.38□□□□□ -1.07
SNHG1-211ENST00000539921 IPO9Q96P70 1041 aaKnown RBP8.38□□□□□ -1.07
SNHG1-211ENST00000539921 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-211ENST00000539921 ZNF219Q9P2Y4 722 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-211ENST00000539921 RB1CC1Q8TDY2 1594 aa8.38□□□□□ -1.07
SNHG1-211ENST00000539921 PPM1GO15355 546 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-211ENST00000539921 ANP32AP39687 249 aaKnown RBP8.37□□□□□ -1.07
SNHG1-211ENST00000539921 AAMPQ13685 434 aa8.37□□□□□ -1.07
SNHG1-211ENST00000539921 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
SNHG1-211ENST00000539921 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
SNHG1-211ENST00000539921 TNIKQ9UKE5 1360 aa8.35□□□□□ -1.07
SNHG1-211ENST00000539921 TAF7LQ5H9L4 462 aa8.34□□□□□ -1.07
SNHG1-211ENST00000539921 CUX2O14529 1486 aa8.33□□□□□ -1.08
SNHG1-211ENST00000539921 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
SNHG1-211ENST00000539921 BCANQ96GW7 911 aa8.33□□□□□ -1.08
SNHG1-211ENST00000539921 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
SNHG1-211ENST00000539921 ZBTB47Q9UFB7 747 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-211ENST00000539921 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
SNHG1-211ENST00000539921 CALD1Q05682 793 aaKnown RBP8.3□□□□□ -1.08
SNHG1-211ENST00000539921 SPINK5Q9NQ38 1064 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-211ENST00000539921 NEFMP07197 916 aa8.28□□□□□ -1.08
SNHG1-211ENST00000539921 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-211ENST00000539921 NBR1Q14596 966 aa8.28□□□□□ -1.08
SNHG1-211ENST00000539921 DHX57Q6P158 1386 aaKnown RBP8.27□□□□□ -1.09
SNHG1-211ENST00000539921 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
SNHG1-211ENST00000539921 HSP90AA2PQ14568 343 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-211ENST00000539921 GSE1Q14687 1217 aa8.27□□□□□ -1.09
SNHG1-211ENST00000539921 TIMELESSQ9UNS1 1208 aa8.27□□□□□ -1.09
SNHG1-211ENST00000539921 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-211ENST00000539921 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
SNHG1-211ENST00000539921 RNF39Q9H2S5 420 aa8.26□□□□□ -1.09
SNHG1-211ENST00000539921 NACADO15069 1562 aa8.26□□□□□ -1.09
SNHG1-211ENST00000539921 ITGAEP38570 1179 aa8.23□□□□□ -1.09
SNHG1-211ENST00000539921 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-211ENST00000539921 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
SNHG1-211ENST00000539921 SMARCA2P51531 1590 aa8.22□□□□□ -1.09
SNHG1-211ENST00000539921 CAPN15O75808 1086 aa8.22□□□□□ -1.09
SNHG1-211ENST00000539921 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
SNHG1-211ENST00000539921 HSP90AA1P07900 732 aaKnown RBP8.21□□□□□ -1.1
SNHG1-211ENST00000539921 POLA2Q14181 598 aa8.2□□□□□ -1.1
SNHG1-211ENST00000539921 POTEDQ86YR6 584 aa8.2□□□□□ -1.1
SNHG1-211ENST00000539921 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
SNHG1-211ENST00000539921 CEP164Q9UPV0 1460 aa8.19□□□□□ -1.1
SNHG1-211ENST00000539921 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
SNHG1-211ENST00000539921 MAP7D2Q96T17 732 aa8.19□□□□□ -1.1
SNHG1-211ENST00000539921 PDCL3Q9H2J4 239 aa8.19□□□□□ -1.1
SNHG1-211ENST00000539921 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
SNHG1-211ENST00000539921 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
SNHG1-211ENST00000539921 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
SNHG1-211ENST00000539921 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-211ENST00000539921 CLCN1P35523 988 aa8.18□□□□□ -1.1
SNHG1-211ENST00000539921 FBXO3Q9UK99 471 aa8.18□□□□□ -1.1
SNHG1-211ENST00000539921 TPM2P07951 284 aa8.17□□□□□ -1.1
SNHG1-211ENST00000539921 MS4A1P11836 297 aa8.17□□□□□ -1.1
SNHG1-211ENST00000539921 VGFO15240 615 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-211ENST00000539921 ANP32CO43423 234 aa8.16□□□□□ -1.1
SNHG1-211ENST00000539921 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
SNHG1-211ENST00000539921 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
SNHG1-211ENST00000539921 GOLGA3Q08378 1498 aa8.15□□□□□ -1.1
SNHG1-211ENST00000539921 VPS8Q8N3P4 1428 aa8.15□□□□□ -1.1
SNHG1-211ENST00000539921 RNF123Q5XPI4 1314 aa8.15□□□□□ -1.1
SNHG1-211ENST00000539921 TERF1P54274 439 aa8.15□□□□□ -1.1
SNHG1-211ENST00000539921 FBLN2P98095 1184 aa8.15□□□□□ -1.1
SNHG1-211ENST00000539921 ABCB7O75027 752 aa8.14□□□□□ -1.11
SNHG1-211ENST00000539921 C1QBPQ07021 282 aaKnown RBP8.14□□□□□ -1.11
SNHG1-211ENST00000539921 TCERG1O14776 1098 aaKnown RBP8.13□□□□□ -1.11
SNHG1-211ENST00000539921 MTERF4Q7Z6M4 381 aaKnown RBP8.13□□□□□ -1.11
SNHG1-211ENST00000539921 IPO4Q8TEX9 1081 aaKnown RBP8.13□□□□□ -1.11
SNHG1-211ENST00000539921 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
SNHG1-211ENST00000539921 BAZ1BQ9UIG0 1483 aaKnown RBP8.13□□□□□ -1.11
SNHG1-211ENST00000539921 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
SNHG1-211ENST00000539921 ARID4BQ4LE39 1312 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-211ENST00000539921 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
SNHG1-211ENST00000539921 SMAP1Q8IYB5 467 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-211ENST00000539921 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-211ENST00000539921 KIF21BO75037 1637 aa8.11□□□□□ -1.11
SNHG1-211ENST00000539921 A0A0U1RQG5 324 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-211ENST00000539921 UTP14CQ5TAP6 766 aaKnown RBP8.11□□□□□ -1.11
SNHG1-211ENST00000539921 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
SNHG1-211ENST00000539921 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
SNHG1-211ENST00000539921 DCAF8L2P0C7V8 631 aa8.1□□□□□ -1.11
SNHG1-211ENST00000539921 KCNH8Q96L42 1107 aa8.09□□□□□ -1.11
SNHG1-211ENST00000539921 SMG6Q86US8 1419 aaKnown RBP8.09□□□□□ -1.11
SNHG1-211ENST00000539921 CNGB1Q14028 1251 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-211ENST00000539921 KLHL34Q8N239 644 aa8.08□□□□□ -1.12
SNHG1-211ENST00000539921 FRAT1Q92837 279 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-211ENST00000539921 NFKBIBQ15653 356 aa8.07□□□□□ -1.12
SNHG1-211ENST00000539921 TAF3Q5VWG9 929 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms