RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	GOLGA3	Q08378	1498 aa		11.86	□□□□□ -0.51
ECHDC2-222	ENST00000539680	CASC1	Q6TDU7	716 aa		11.86	□□□□□ -0.51
ECHDC2-222	ENST00000539680	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
ECHDC2-222	ENST00000539680	CFAP53	Q96M91	514 aa		11.86	□□□□□ -0.51
ECHDC2-222	ENST00000539680	CLIP1	P30622	1438 aa		11.85	□□□□□ -0.51
ECHDC2-222	ENST00000539680	GOLGA6L22	H0YM25	854 aa		11.85	□□□□□ -0.51
ECHDC2-222	ENST00000539680	PPP1R15A	O75807	674 aa	Predicted RBP	11.84	□□□□□ -0.51
ECHDC2-222	ENST00000539680	PLPPR3	Q6T4P5	718 aa		11.84	□□□□□ -0.51
ECHDC2-222	ENST00000539680	SCAF1	Q9H7N4	1312 aa	Known RBP	11.82	□□□□□ -0.52
ECHDC2-222	ENST00000539680	KDM2A	Q9Y2K7	1162 aa		11.82	□□□□□ -0.52
ECHDC2-222	ENST00000539680	CHMP4B	Q9H444	224 aa	Known RBP	11.8	□□□□□ -0.52
ECHDC2-222	ENST00000539680	SALL2	Q9Y467	1007 aa	Predicted RBP	11.8	□□□□□ -0.52
ECHDC2-222	ENST00000539680	PLEKHD1	A6NEE1	506 aa		11.79	□□□□□ -0.52
ECHDC2-222	ENST00000539680	ZRSR1	Q15695	479 aa	Known RBP	11.77	□□□□□ -0.53
ECHDC2-222	ENST00000539680	TRIM44	Q96DX7	344 aa	Predicted RBP	11.77	□□□□□ -0.53
ECHDC2-222	ENST00000539680	PNN	Q9H307	717 aa	Known RBP	11.75	□□□□□ -0.53
ECHDC2-222	ENST00000539680	NBR1	Q14596	966 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	C14orf37	Q86TY3	774 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	NACAD	O15069	1562 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	MS4A1	P11836	297 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	KNSTRN	Q9Y448	316 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	ZBTB7C	A1YPR0	619 aa		11.74	□□□□□ -0.53
ECHDC2-222	ENST00000539680	KIF27	Q86VH2	1401 aa		11.72	□□□□□ -0.53
ECHDC2-222	ENST00000539680	CEP164	Q9UPV0	1460 aa		11.72	□□□□□ -0.53
ECHDC2-222	ENST00000539680	NUDC	Q9Y266	331 aa		11.72	□□□□□ -0.53
ECHDC2-222	ENST00000539680	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.71	□□□□□ -0.53
ECHDC2-222	ENST00000539680	GOLGA6L6	A8MZA4	724 aa		11.71	□□□□□ -0.53
ECHDC2-222	ENST00000539680	HAP1	P54257	671 aa	Predicted RBP	11.71	□□□□□ -0.53
ECHDC2-222	ENST00000539680	MAPK8IP3	Q9UPT6	1336 aa		11.71	□□□□□ -0.54
ECHDC2-222	ENST00000539680		A0A0G2JS52	829 aa		11.71	□□□□□ -0.54
ECHDC2-222	ENST00000539680	FTSJ3	Q8IY81	847 aa	Known RBP	11.71	□□□□□ -0.54
ECHDC2-222	ENST00000539680	CEP162	Q5TB80	1403 aa		11.7	□□□□□ -0.54
ECHDC2-222	ENST00000539680	RRP7BP	Q9NSQ0	103 aa		11.7	□□□□□ -0.54
ECHDC2-222	ENST00000539680	PPM1G	O15355	546 aa	Predicted RBP	11.69	□□□□□ -0.54
ECHDC2-222	ENST00000539680	TNNT2	P45379	298 aa	Predicted RBP	11.69	□□□□□ -0.54
ECHDC2-222	ENST00000539680	CFAP44	Q96MT7	982 aa		11.68	□□□□□ -0.54
ECHDC2-222	ENST00000539680	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.67	□□□□□ -0.54
ECHDC2-222	ENST00000539680	KANK1	Q14678	1352 aa		11.67	□□□□□ -0.54
ECHDC2-222	ENST00000539680	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.67	□□□□□ -0.54
ECHDC2-222	ENST00000539680	PTMA	P06454	111 aa	Known RBP	11.67	□□□□□ -0.54
ECHDC2-222	ENST00000539680	TNIK	Q9UKE5	1360 aa		11.66	□□□□□ -0.54
ECHDC2-222	ENST00000539680	KCNH8	Q96L42	1107 aa		11.66	□□□□□ -0.54
ECHDC2-222	ENST00000539680	ARX	Q96QS3	562 aa		11.66	□□□□□ -0.54
ECHDC2-222	ENST00000539680	CARD11	Q9BXL7	1154 aa		11.65	□□□□□ -0.54
ECHDC2-222	ENST00000539680	HDGF	P51858	240 aa	Known RBP	11.65	□□□□□ -0.54
ECHDC2-222	ENST00000539680	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.65	□□□□□ -0.55
ECHDC2-222	ENST00000539680	FHAD1	B1AJZ9	1412 aa		11.64	□□□□□ -0.55
ECHDC2-222	ENST00000539680	MIER1	Q8N108	512 aa		11.63	□□□□□ -0.55
ECHDC2-222	ENST00000539680	POGK	Q9P215	609 aa		11.62	□□□□□ -0.55
ECHDC2-222	ENST00000539680	ERCC6	Q03468	1493 aa		11.61	□□□□□ -0.55
ECHDC2-222	ENST00000539680	NRDC	O43847	1150 aa		11.61	□□□□□ -0.55
ECHDC2-222	ENST00000539680	CCNB3	Q8WWL7	1395 aa		11.6	□□□□□ -0.55
ECHDC2-222	ENST00000539680	IRX6	P78412	446 aa	Predicted RBP	11.59	□□□□□ -0.55
ECHDC2-222	ENST00000539680	PPP4R2	Q9NY27	417 aa		11.59	□□□□□ -0.55
ECHDC2-222	ENST00000539680	RGL3	Q3MIN7	710 aa		11.59	□□□□□ -0.55
ECHDC2-222	ENST00000539680	ERICH6B	Q5W0A0	696 aa		11.58	□□□□□ -0.56
ECHDC2-222	ENST00000539680	TMF1	P82094	1093 aa		11.58	□□□□□ -0.56
ECHDC2-222	ENST00000539680	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	MCC	P23508	829 aa		11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	OS9	Q13438	667 aa	Predicted RBP	11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	HSP90AB1	P08238	724 aa	Known RBP	11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	TIMELESS	Q9UNS1	1208 aa		11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.57	□□□□□ -0.56
ECHDC2-222	ENST00000539680	PTMS	P20962	102 aa		11.56	□□□□□ -0.56
ECHDC2-222	ENST00000539680	LAS1L	Q9Y4W2	734 aa	Known RBP	11.56	□□□□□ -0.56
ECHDC2-222	ENST00000539680	NPHP1	O15259	732 aa		11.55	□□□□□ -0.56
ECHDC2-222	ENST00000539680	L1TD1	Q5T7N2	865 aa	Known RBP	11.55	□□□□□ -0.56
ECHDC2-222	ENST00000539680	GOLGA2	Q08379	1002 aa		11.54	□□□□□ -0.56
ECHDC2-222	ENST00000539680	FGD1	P98174	961 aa		11.53	□□□□□ -0.56
ECHDC2-222	ENST00000539680	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.53	□□□□□ -0.56
ECHDC2-222	ENST00000539680	HSCB	Q8IWL3	235 aa		11.52	□□□□□ -0.56
ECHDC2-222	ENST00000539680	EIF4G1	Q04637	1599 aa	Known RBP	11.52	□□□□□ -0.56
ECHDC2-222	ENST00000539680	KCNJ4	P48050	445 aa		11.51	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CALD1	Q05682	793 aa	Known RBP	11.5	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CHAF1A	Q13111	956 aa	Predicted RBP	11.5	□□□□□ -0.57
ECHDC2-222	ENST00000539680	PLEKHG5	O94827	1062 aa		11.5	□□□□□ -0.57
ECHDC2-222	ENST00000539680	ARHGAP35	Q9NRY4	1499 aa		11.5	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CHMP4A	Q9BY43	222 aa		11.5	□□□□□ -0.57
ECHDC2-222	ENST00000539680	NOP58	Q9Y2X3	529 aa	Known RBP	11.49	□□□□□ -0.57
ECHDC2-222	ENST00000539680	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.49	□□□□□ -0.57
ECHDC2-222	ENST00000539680	GOLGA6L4	A6NEF3	574 aa		11.49	□□□□□ -0.57
ECHDC2-222	ENST00000539680	FRAT1	Q92837	279 aa	Predicted RBP	11.48	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CCER2	I3L3R5	266 aa		11.47	□□□□□ -0.57
ECHDC2-222	ENST00000539680	U2SURP	O15042	1029 aa	Known RBP	11.47	□□□□□ -0.57
ECHDC2-222	ENST00000539680	EIF3A	Q14152	1382 aa	Known RBP	11.47	□□□□□ -0.57
ECHDC2-222	ENST00000539680	NEUROD2	Q15784	382 aa		11.47	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CC2D1B	Q5T0F9	858 aa	Known RBP	11.47	□□□□□ -0.57
ECHDC2-222	ENST00000539680	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.46	□□□□□ -0.57
ECHDC2-222	ENST00000539680	CARMIL2	Q6F5E8	1435 aa		11.46	□□□□□ -0.57
ECHDC2-222	ENST00000539680	KTN1	Q86UP2	1357 aa	Known RBP	11.46	□□□□□ -0.57
ECHDC2-222	ENST00000539680	IPO8	O15397	1037 aa	Known RBP	11.46	□□□□□ -0.58
ECHDC2-222	ENST00000539680	RTF1	Q92541	710 aa	Known RBP	11.46	□□□□□ -0.58
ECHDC2-222	ENST00000539680	LMOD2	Q6P5Q4	547 aa		11.46	□□□□□ -0.58
ECHDC2-222	ENST00000539680	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.45	□□□□□ -0.58
ECHDC2-222	ENST00000539680	MORC1	Q86VD1	984 aa		11.45	□□□□□ -0.58
ECHDC2-222	ENST00000539680	SETD5	Q9C0A6	1442 aa		11.44	□□□□□ -0.58
ECHDC2-222	ENST00000539680	HTATSF1	O43719	755 aa	Known RBP	11.44	□□□□□ -0.58
ECHDC2-222	ENST00000539680	SENP3	Q9H4L4	574 aa	Predicted RBP	11.44	□□□□□ -0.58
ECHDC2-222	ENST00000539680	CARMIL1	Q5VZK9	1371 aa		11.44	□□□□□ -0.58
ECHDC2-222	ENST00000539680	RGS3	P49796	1198 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms