RNA–Protein interactions for RNA: ENST00000539363.2

ITGA10-204, Transcript of integrin subunit alpha 10, humanhuman

TSL 1 (best) BASIC

Gene ITGA10, Length 4,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA10-204ENST00000539363 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
ITGA10-204ENST00000539363 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
ITGA10-204ENST00000539363 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
ITGA10-204ENST00000539363 CUX2O14529 1486 aa13.21□□□□□ -0.29
ITGA10-204ENST00000539363 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
ITGA10-204ENST00000539363 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
ITGA10-204ENST00000539363 SOGA1O94964 1423 aa13.18□□□□□ -0.3
ITGA10-204ENST00000539363 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
ITGA10-204ENST00000539363 FKBP8Q14318 412 aa13.15□□□□□ -0.3
ITGA10-204ENST00000539363 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
ITGA10-204ENST00000539363 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
ITGA10-204ENST00000539363 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
ITGA10-204ENST00000539363 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
ITGA10-204ENST00000539363 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
ITGA10-204ENST00000539363 HIRIP3Q9BW71 556 aaPredicted RBP13.11□□□□□ -0.31
ITGA10-204ENST00000539363 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
ITGA10-204ENST00000539363 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
ITGA10-204ENST00000539363 MIER1Q8N108 512 aa13.1□□□□□ -0.31
ITGA10-204ENST00000539363 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.1□□□□□ -0.31
ITGA10-204ENST00000539363 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.31
ITGA10-204ENST00000539363 CDCA8Q53HL2 280 aa13.08□□□□□ -0.31
ITGA10-204ENST00000539363 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
ITGA10-204ENST00000539363 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
ITGA10-204ENST00000539363 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
ITGA10-204ENST00000539363 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
ITGA10-204ENST00000539363 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
ITGA10-204ENST00000539363 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
ITGA10-204ENST00000539363 CCDC136Q96JN2 1154 aa13.03□□□□□ -0.32
ITGA10-204ENST00000539363 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
ITGA10-204ENST00000539363 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
ITGA10-204ENST00000539363 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
ITGA10-204ENST00000539363 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
ITGA10-204ENST00000539363 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
ITGA10-204ENST00000539363 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
ITGA10-204ENST00000539363 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
ITGA10-204ENST00000539363 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
ITGA10-204ENST00000539363 WIZO95785 1651 aa12.99□□□□□ -0.33
ITGA10-204ENST00000539363 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
ITGA10-204ENST00000539363 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
ITGA10-204ENST00000539363 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
ITGA10-204ENST00000539363 CFAP53Q96M91 514 aa12.97□□□□□ -0.33
ITGA10-204ENST00000539363 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
ITGA10-204ENST00000539363 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
ITGA10-204ENST00000539363 SETD5Q9C0A6 1442 aa12.94□□□□□ -0.34
ITGA10-204ENST00000539363 KANK1Q14678 1352 aa12.93□□□□□ -0.34
ITGA10-204ENST00000539363 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
ITGA10-204ENST00000539363 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
ITGA10-204ENST00000539363 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
ITGA10-204ENST00000539363 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
ITGA10-204ENST00000539363 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
ITGA10-204ENST00000539363 EFCAB2Q5VUJ9 269 aa12.91□□□□□ -0.34
ITGA10-204ENST00000539363 POGKQ9P215 609 aa12.9□□□□□ -0.34
ITGA10-204ENST00000539363 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
ITGA10-204ENST00000539363 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
ITGA10-204ENST00000539363 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
ITGA10-204ENST00000539363 TMF1P82094 1093 aa12.86□□□□□ -0.35
ITGA10-204ENST00000539363 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
ITGA10-204ENST00000539363 HDGFP51858 240 aaKnown RBP12.86□□□□□ -0.35
ITGA10-204ENST00000539363 PKD2Q13563 968 aa12.86□□□□□ -0.35
ITGA10-204ENST00000539363 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
ITGA10-204ENST00000539363 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
ITGA10-204ENST00000539363 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
ITGA10-204ENST00000539363 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.35
ITGA10-204ENST00000539363 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
ITGA10-204ENST00000539363 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
ITGA10-204ENST00000539363 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
ITGA10-204ENST00000539363 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
ITGA10-204ENST00000539363 GGT6Q6P531 493 aa12.81□□□□□ -0.36
ITGA10-204ENST00000539363 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
ITGA10-204ENST00000539363 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
ITGA10-204ENST00000539363 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
ITGA10-204ENST00000539363 NUP155O75694 1391 aa12.8□□□□□ -0.36
ITGA10-204ENST00000539363 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
ITGA10-204ENST00000539363 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
ITGA10-204ENST00000539363 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
ITGA10-204ENST00000539363 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
ITGA10-204ENST00000539363 MLECQ14165 292 aa12.77□□□□□ -0.36
ITGA10-204ENST00000539363 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.36
ITGA10-204ENST00000539363 CCER2I3L3R5 266 aa12.77□□□□□ -0.36
ITGA10-204ENST00000539363 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.36
ITGA10-204ENST00000539363 HSPA5P11021 654 aaKnown RBP12.77□□□□□ -0.37
ITGA10-204ENST00000539363 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
ITGA10-204ENST00000539363 CC2D1BQ5T0F9 858 aaKnown RBP12.76□□□□□ -0.37
ITGA10-204ENST00000539363 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
ITGA10-204ENST00000539363 A0A0G2JS52 829 aa12.75□□□□□ -0.37
ITGA10-204ENST00000539363 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
ITGA10-204ENST00000539363 FOXD1Q16676 465 aa12.74□□□□□ -0.37
ITGA10-204ENST00000539363 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
ITGA10-204ENST00000539363 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
ITGA10-204ENST00000539363 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
ITGA10-204ENST00000539363 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
ITGA10-204ENST00000539363 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
ITGA10-204ENST00000539363 KIF3BO15066 747 aa12.73□□□□□ -0.37
ITGA10-204ENST00000539363 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
ITGA10-204ENST00000539363 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGA10-204ENST00000539363 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
ITGA10-204ENST00000539363 LMOD2Q6P5Q4 547 aa12.72□□□□□ -0.37
ITGA10-204ENST00000539363 MS4A1P11836 297 aa12.71□□□□□ -0.37
ITGA10-204ENST00000539363 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.37
ITGA10-204ENST00000539363 IGF1RP08069 1367 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms