RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 EFCAB5A4FU69 1503 aa31.39■■■□□ 2.61
DDX55-205ENST00000538744 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
DDX55-205ENST00000538744 ADAMTS12P58397 1594 aa31.37■■■□□ 2.61
DDX55-205ENST00000538744 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
DDX55-205ENST00000538744 ZNF608Q9ULD9 1512 aaPredicted RBP31.32■■■□□ 2.61
DDX55-205ENST00000538744 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
DDX55-205ENST00000538744 SAMD9Q5K651 1589 aa31.21■■■□□ 2.59
DDX55-205ENST00000538744 MAP3K1Q13233 1512 aa31.21■■■□□ 2.59
DDX55-205ENST00000538744 FHOD3Q2V2M9 1422 aa31.18■■■□□ 2.58
DDX55-205ENST00000538744 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
DDX55-205ENST00000538744 TIAM1Q13009 1591 aa31.16■■■□□ 2.58
DDX55-205ENST00000538744 ZEB1P37275 1124 aaPredicted RBP31.14■■■□□ 2.58
DDX55-205ENST00000538744 P3H3Q8IVL6 736 aa31.14■■■□□ 2.58
DDX55-205ENST00000538744 SNAPC4Q5SXM2 1469 aa31.13■■■□□ 2.57
DDX55-205ENST00000538744 KANK4Q5T7N3 995 aaPredicted RBP31.12■■■□□ 2.57
DDX55-205ENST00000538744 CFAP43Q8NDM7 1665 aa31.11■■■□□ 2.57
DDX55-205ENST00000538744 IQGAP2Q13576 1575 aa31.11■■■□□ 2.57
DDX55-205ENST00000538744 FYCO1Q9BQS8 1478 aa31.1■■■□□ 2.57
DDX55-205ENST00000538744 FMN1Q68DA7 1419 aa31.08■■■□□ 2.57
DDX55-205ENST00000538744 MAGI1Q96QZ7 1491 aaPredicted RBP31.07■■■□□ 2.56
DDX55-205ENST00000538744 CASKIN1Q8WXD9 1431 aa31.06■■■□□ 2.56
DDX55-205ENST00000538744 GRIN2AQ12879 1464 aa31.01■■■□□ 2.56
DDX55-205ENST00000538744 LRRC9Q6ZRR7 1453 aa30.98■■■□□ 2.55
DDX55-205ENST00000538744 SYNJ2O15056 1496 aa30.95■■■□□ 2.54
DDX55-205ENST00000538744 UGGT2Q9NYU1 1516 aa30.94■■■□□ 2.54
DDX55-205ENST00000538744 RRBP1Q9P2E9 1410 aaKnown RBP30.94■■■□□ 2.54
DDX55-205ENST00000538744 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
DDX55-205ENST00000538744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
DDX55-205ENST00000538744 ATP1B4Q9UN42 357 aaPredicted RBP30.89■■■□□ 2.54
DDX55-205ENST00000538744 HNRNPUL2Q1KMD3 747 aaKnown RBP30.88■■■□□ 2.53
DDX55-205ENST00000538744 CCER1Q8TC90 406 aaPredicted RBP30.88■■■□□ 2.53
DDX55-205ENST00000538744 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
DDX55-205ENST00000538744 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
DDX55-205ENST00000538744 CEP170Q5SW79 1584 aa30.81■■■□□ 2.52
DDX55-205ENST00000538744 CCNB3Q8WWL7 1395 aa30.8■■■□□ 2.52
DDX55-205ENST00000538744 KIAA0556O60303 1618 aa30.78■■■□□ 2.52
DDX55-205ENST00000538744 HECW1Q76N89 1606 aa30.76■■■□□ 2.51
DDX55-205ENST00000538744 NUP160Q12769 1436 aa30.75■■■□□ 2.51
DDX55-205ENST00000538744 DISP1Q96F81 1524 aa30.73■■■□□ 2.51
DDX55-205ENST00000538744 CCDC18Q5T9S5 1454 aa30.72■■■□□ 2.51
DDX55-205ENST00000538744 FBLN2P98095 1184 aa30.7■■■□□ 2.51
DDX55-205ENST00000538744 PHLDB1Q86UU1 1377 aa30.7■■■□□ 2.5
DDX55-205ENST00000538744 MTUS2Q5JR59 1369 aa30.65■■■□□ 2.5
DDX55-205ENST00000538744 EHBP1L1Q8N3D4 1523 aa30.64■■■□□ 2.5
DDX55-205ENST00000538744 SUPT6HQ7KZ85 1726 aaKnown RBP30.6■■■□□ 2.49
DDX55-205ENST00000538744 EPRSP07814 1512 aaKnown RBP30.59■■■□□ 2.49
DDX55-205ENST00000538744 CHD1O14646 1710 aa30.56■■■□□ 2.48
DDX55-205ENST00000538744 RAPGEF6Q8TEU7 1601 aa30.55■■■□□ 2.48
DDX55-205ENST00000538744 CARMIL2Q6F5E8 1435 aa30.54■■■□□ 2.48
DDX55-205ENST00000538744 MAGI3Q5TCQ9 1506 aa30.51■■■□□ 2.48
DDX55-205ENST00000538744 NCOA2Q15596 1464 aa30.51■■■□□ 2.48
DDX55-205ENST00000538744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.51■■■□□ 2.47
DDX55-205ENST00000538744 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
DDX55-205ENST00000538744 CDK13Q14004 1512 aaKnown RBP30.5■■■□□ 2.47
DDX55-205ENST00000538744 FGD6Q6ZV73 1430 aa30.48■■■□□ 2.47
DDX55-205ENST00000538744 FAM50AQ14320 339 aaKnown RBP30.46■■■□□ 2.47
DDX55-205ENST00000538744 ARHGEF11O15085 1522 aa30.46■■■□□ 2.47
DDX55-205ENST00000538744 ITGAEP38570 1179 aa30.44■■■□□ 2.46
DDX55-205ENST00000538744 NUP153P49790 1475 aaKnown RBP30.44■■■□□ 2.46
DDX55-205ENST00000538744 MYOM3Q5VTT5 1437 aa30.43■■■□□ 2.46
DDX55-205ENST00000538744 PLB1Q6P1J6 1458 aa30.34■■■□□ 2.45
DDX55-205ENST00000538744 DHX57Q6P158 1386 aaKnown RBP30.33■■■□□ 2.45
DDX55-205ENST00000538744 PTPN23Q9H3S7 1636 aa30.32■■■□□ 2.44
DDX55-205ENST00000538744 CLSPNQ9HAW4 1339 aa30.31■■■□□ 2.44
DDX55-205ENST00000538744 SHROOM2Q13796 1616 aa30.31■■■□□ 2.44
DDX55-205ENST00000538744 SETD5Q9C0A6 1442 aa30.3■■■□□ 2.44
DDX55-205ENST00000538744 ARID3CA6NKF2 412 aa30.3■■■□□ 2.44
DDX55-205ENST00000538744 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
DDX55-205ENST00000538744 ABCA8O94911 1581 aa30.29■■■□□ 2.44
DDX55-205ENST00000538744 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
DDX55-205ENST00000538744 CDK11AQ9UQ88 783 aaPredicted RBP30.27■■■□□ 2.44
DDX55-205ENST00000538744 TCOF1Q13428 1488 aaKnown RBP30.24■■■□□ 2.43
DDX55-205ENST00000538744 MIA2Q96PC5 1412 aa30.22■■■□□ 2.43
DDX55-205ENST00000538744 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
DDX55-205ENST00000538744 ADCY10Q96PN6 1610 aa30.17■■■□□ 2.42
DDX55-205ENST00000538744 PTPRGP23470 1445 aa30.16■■■□□ 2.42
DDX55-205ENST00000538744 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
DDX55-205ENST00000538744 PTPRKQ15262 1439 aa30.12■■■□□ 2.41
DDX55-205ENST00000538744 ITSN2Q9NZM3 1697 aa30.09■■■□□ 2.41
DDX55-205ENST00000538744 HFM1A2PYH4 1435 aa30.08■■■□□ 2.41
DDX55-205ENST00000538744 ATP10BO94823 1461 aa30.08■■■□□ 2.41
DDX55-205ENST00000538744 KIF14Q15058 1648 aa30.06■■■□□ 2.4
DDX55-205ENST00000538744 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
DDX55-205ENST00000538744 MAPKBP1O60336 1514 aa30.01■■■□□ 2.4
DDX55-205ENST00000538744 UACAQ9BZF9 1416 aa30■■■□□ 2.39
DDX55-205ENST00000538744 GCC2Q8IWJ2 1684 aa30■■■□□ 2.39
DDX55-205ENST00000538744 NAIPQ13075 1403 aa29.99■■■□□ 2.39
DDX55-205ENST00000538744 PLEKHD1A6NEE1 506 aa29.99■■■□□ 2.39
DDX55-205ENST00000538744 AKNAQ7Z591 1439 aa29.98■■■□□ 2.39
DDX55-205ENST00000538744 DNMT1P26358 1616 aaKnown RBP29.97■■■□□ 2.39
DDX55-205ENST00000538744 GPATCH8Q9UKJ3 1502 aaKnown RBP29.95■■■□□ 2.38
DDX55-205ENST00000538744 ABCC2Q92887 1545 aa29.93■■■□□ 2.38
DDX55-205ENST00000538744 DAPK1P53355 1430 aa29.91■■■□□ 2.38
DDX55-205ENST00000538744 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
DDX55-205ENST00000538744 ABCC10Q5T3U5 1492 aa29.91■■■□□ 2.38
DDX55-205ENST00000538744 CAMSAP2Q08AD1 1489 aa29.89■■■□□ 2.38
DDX55-205ENST00000538744 CFDP1Q9UEE9 299 aaPredicted RBP29.87■■■□□ 2.37
DDX55-205ENST00000538744 CHIC2Q9UKJ5 165 aa29.85■■■□□ 2.37
DDX55-205ENST00000538744 ABCC5O15440 1437 aa29.85■■■□□ 2.37
DDX55-205ENST00000538744 ZNF644Q9H582 1327 aaPredicted RBP29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms