RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 FAM69CQ0P6D2 419 aa18.18■□□□□ 0.5
VPS37C-204ENST00000538036 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
VPS37C-204ENST00000538036 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
VPS37C-204ENST00000538036 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
VPS37C-204ENST00000538036 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
VPS37C-204ENST00000538036 KIAA0586Q9BVV6 1533 aa18.11■□□□□ 0.49
VPS37C-204ENST00000538036 IGF1RP08069 1367 aa18.09■□□□□ 0.49
VPS37C-204ENST00000538036 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
VPS37C-204ENST00000538036 ADCY10Q96PN6 1610 aa18.04■□□□□ 0.48
VPS37C-204ENST00000538036 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
VPS37C-204ENST00000538036 PTPRGP23470 1445 aa18■□□□□ 0.47
VPS37C-204ENST00000538036 CUL7Q14999 1698 aa17.99■□□□□ 0.47
VPS37C-204ENST00000538036 KDM6BO15054 1643 aa17.96■□□□□ 0.47
VPS37C-204ENST00000538036 CARMIL2Q6F5E8 1435 aa17.96■□□□□ 0.47
VPS37C-204ENST00000538036 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
VPS37C-204ENST00000538036 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
VPS37C-204ENST00000538036 KDM4FA0A1W2PPD8 638 aa17.94■□□□□ 0.46
VPS37C-204ENST00000538036 ABCC2Q92887 1545 aa17.91■□□□□ 0.46
VPS37C-204ENST00000538036 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
VPS37C-204ENST00000538036 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
VPS37C-204ENST00000538036 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
VPS37C-204ENST00000538036 ASXL2Q76L83 1435 aa17.86■□□□□ 0.45
VPS37C-204ENST00000538036 TSPOAP1O95153 1857 aa17.85■□□□□ 0.45
VPS37C-204ENST00000538036 GLI2P10070 1586 aa17.85■□□□□ 0.45
VPS37C-204ENST00000538036 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
VPS37C-204ENST00000538036 IQGAP2Q13576 1575 aa17.83■□□□□ 0.45
VPS37C-204ENST00000538036 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
VPS37C-204ENST00000538036 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.44
VPS37C-204ENST00000538036 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
VPS37C-204ENST00000538036 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
VPS37C-204ENST00000538036 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
VPS37C-204ENST00000538036 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
VPS37C-204ENST00000538036 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
VPS37C-204ENST00000538036 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
VPS37C-204ENST00000538036 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
VPS37C-204ENST00000538036 MAP3K4Q9Y6R4 1608 aa17.69■□□□□ 0.42
VPS37C-204ENST00000538036 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
VPS37C-204ENST00000538036 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
VPS37C-204ENST00000538036 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
VPS37C-204ENST00000538036 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
VPS37C-204ENST00000538036 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
VPS37C-204ENST00000538036 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
VPS37C-204ENST00000538036 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
VPS37C-204ENST00000538036 FAM9AQ8IZU1 332 aaPredicted RBP17.58■□□□□ 0.4
VPS37C-204ENST00000538036 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
VPS37C-204ENST00000538036 ABCA8O94911 1581 aa17.54■□□□□ 0.4
VPS37C-204ENST00000538036 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.39
VPS37C-204ENST00000538036 HECW2Q9P2P5 1572 aa17.51■□□□□ 0.39
VPS37C-204ENST00000538036 CTTNBP2Q8WZ74 1663 aa17.5■□□□□ 0.39
VPS37C-204ENST00000538036 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
VPS37C-204ENST00000538036 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
VPS37C-204ENST00000538036 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
VPS37C-204ENST00000538036 ATP10BO94823 1461 aa17.43■□□□□ 0.38
VPS37C-204ENST00000538036 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
VPS37C-204ENST00000538036 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
VPS37C-204ENST00000538036 NEO1Q92859 1461 aa17.36■□□□□ 0.37
VPS37C-204ENST00000538036 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
VPS37C-204ENST00000538036 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
VPS37C-204ENST00000538036 KIF21BO75037 1637 aa17.35■□□□□ 0.37
VPS37C-204ENST00000538036 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
VPS37C-204ENST00000538036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
VPS37C-204ENST00000538036 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
VPS37C-204ENST00000538036 FBXO41Q8TF61 875 aa17.32■□□□□ 0.36
VPS37C-204ENST00000538036 PTPRMP28827 1452 aa17.31■□□□□ 0.36
VPS37C-204ENST00000538036 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
VPS37C-204ENST00000538036 ADAMTSL3P82987 1691 aa17.28■□□□□ 0.36
VPS37C-204ENST00000538036 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
VPS37C-204ENST00000538036 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
VPS37C-204ENST00000538036 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
VPS37C-204ENST00000538036 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
VPS37C-204ENST00000538036 EEA1Q15075 1411 aa17.22■□□□□ 0.35
VPS37C-204ENST00000538036 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
VPS37C-204ENST00000538036 FRMPD1Q5SYB0 1578 aa17.2■□□□□ 0.34
VPS37C-204ENST00000538036 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
VPS37C-204ENST00000538036 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
VPS37C-204ENST00000538036 AKNAQ7Z591 1439 aa17.2■□□□□ 0.34
VPS37C-204ENST00000538036 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
VPS37C-204ENST00000538036 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
VPS37C-204ENST00000538036 FANCAO15360 1455 aa17.18■□□□□ 0.34
VPS37C-204ENST00000538036 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
VPS37C-204ENST00000538036 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
VPS37C-204ENST00000538036 LMTK3Q96Q04 1460 aa17.16■□□□□ 0.34
VPS37C-204ENST00000538036 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
VPS37C-204ENST00000538036 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
VPS37C-204ENST00000538036 CFAP74Q9C0B2 1584 aa17.14■□□□□ 0.33
VPS37C-204ENST00000538036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS37C-204ENST00000538036 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
VPS37C-204ENST00000538036 ZMYM4Q5VZL5 1548 aa17.11■□□□□ 0.33
VPS37C-204ENST00000538036 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
VPS37C-204ENST00000538036 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
VPS37C-204ENST00000538036 PLCH2O75038 1416 aa17.08■□□□□ 0.32
VPS37C-204ENST00000538036 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
VPS37C-204ENST00000538036 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
VPS37C-204ENST00000538036 HSPA2P54652 639 aa17.06■□□□□ 0.32
VPS37C-204ENST00000538036 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
VPS37C-204ENST00000538036 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
VPS37C-204ENST00000538036 CDK11AQ9UQ88 783 aaPredicted RBP17.05■□□□□ 0.32
VPS37C-204ENST00000538036 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
VPS37C-204ENST00000538036 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
VPS37C-204ENST00000538036 ATP10AO60312 1499 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms