RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 KDM4FA0A1W2PPD8 638 aa20.21■□□□□ 0.83
CLPB-208ENST00000538021 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
CLPB-208ENST00000538021 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
CLPB-208ENST00000538021 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
CLPB-208ENST00000538021 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
CLPB-208ENST00000538021 KDM6BO15054 1643 aa20.16■□□□□ 0.82
CLPB-208ENST00000538021 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
CLPB-208ENST00000538021 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
CLPB-208ENST00000538021 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
CLPB-208ENST00000538021 ADCY10Q96PN6 1610 aa20.11■□□□□ 0.81
CLPB-208ENST00000538021 TSPOAP1O95153 1857 aa20.1■□□□□ 0.81
CLPB-208ENST00000538021 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
CLPB-208ENST00000538021 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
CLPB-208ENST00000538021 PTPRGP23470 1445 aa19.93■□□□□ 0.78
CLPB-208ENST00000538021 ADGRL1O94910 1474 aa19.91■□□□□ 0.78
CLPB-208ENST00000538021 IGF1RP08069 1367 aa19.88■□□□□ 0.77
CLPB-208ENST00000538021 ASXL2Q76L83 1435 aa19.86■□□□□ 0.77
CLPB-208ENST00000538021 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
CLPB-208ENST00000538021 PLB1Q6P1J6 1458 aa19.84■□□□□ 0.77
CLPB-208ENST00000538021 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
CLPB-208ENST00000538021 CUL7Q14999 1698 aa19.83■□□□□ 0.76
CLPB-208ENST00000538021 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
CLPB-208ENST00000538021 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
CLPB-208ENST00000538021 CARMIL2Q6F5E8 1435 aa19.82■□□□□ 0.76
CLPB-208ENST00000538021 GLI2P10070 1586 aa19.82■□□□□ 0.76
CLPB-208ENST00000538021 HECW2Q9P2P5 1572 aa19.79■□□□□ 0.76
CLPB-208ENST00000538021 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
CLPB-208ENST00000538021 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
CLPB-208ENST00000538021 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
CLPB-208ENST00000538021 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
CLPB-208ENST00000538021 EPRSP07814 1512 aaKnown RBP19.72■□□□□ 0.75
CLPB-208ENST00000538021 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
CLPB-208ENST00000538021 IQGAP2Q13576 1575 aa19.7■□□□□ 0.74
CLPB-208ENST00000538021 MAP3K4Q9Y6R4 1608 aa19.69■□□□□ 0.74
CLPB-208ENST00000538021 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
CLPB-208ENST00000538021 DISP1Q96F81 1524 aa19.65■□□□□ 0.74
CLPB-208ENST00000538021 ZCCHC11Q5TAX3 1644 aaKnown RBP19.63■□□□□ 0.73
CLPB-208ENST00000538021 WDR7Q9Y4E6 1490 aa19.57■□□□□ 0.72
CLPB-208ENST00000538021 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
CLPB-208ENST00000538021 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
CLPB-208ENST00000538021 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
CLPB-208ENST00000538021 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CLPB-208ENST00000538021 KIAA0556O60303 1618 aa19.53■□□□□ 0.72
CLPB-208ENST00000538021 MAGI3Q5TCQ9 1506 aa19.5■□□□□ 0.71
CLPB-208ENST00000538021 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
CLPB-208ENST00000538021 KIF21BO75037 1637 aa19.48■□□□□ 0.71
CLPB-208ENST00000538021 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
CLPB-208ENST00000538021 ABCA8O94911 1581 aa19.37■□□□□ 0.69
CLPB-208ENST00000538021 PTPRMP28827 1452 aa19.37■□□□□ 0.69
CLPB-208ENST00000538021 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
CLPB-208ENST00000538021 ARID3CA6NKF2 412 aa19.36■□□□□ 0.69
CLPB-208ENST00000538021 ARAP3Q8WWN8 1544 aa19.35■□□□□ 0.69
CLPB-208ENST00000538021 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
CLPB-208ENST00000538021 ADAMTSL3P82987 1691 aa19.32■□□□□ 0.68
CLPB-208ENST00000538021 RAPGEF3O95398 923 aa19.31■□□□□ 0.68
CLPB-208ENST00000538021 ARID4BQ4LE39 1312 aaPredicted RBP19.3■□□□□ 0.68
CLPB-208ENST00000538021 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
CLPB-208ENST00000538021 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.68
CLPB-208ENST00000538021 PCF11O94913 1555 aaKnown RBP19.27■□□□□ 0.67
CLPB-208ENST00000538021 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
CLPB-208ENST00000538021 ATP10BO94823 1461 aa19.24■□□□□ 0.67
CLPB-208ENST00000538021 MADDQ8WXG6 1647 aa19.24■□□□□ 0.67
CLPB-208ENST00000538021 LMTK3Q96Q04 1460 aa19.23■□□□□ 0.67
CLPB-208ENST00000538021 BCORL1Q5H9F3 1711 aa19.23■□□□□ 0.67
CLPB-208ENST00000538021 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
CLPB-208ENST00000538021 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
CLPB-208ENST00000538021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
CLPB-208ENST00000538021 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
CLPB-208ENST00000538021 NEO1Q92859 1461 aa19.2■□□□□ 0.66
CLPB-208ENST00000538021 HSPA2P54652 639 aa19.19■□□□□ 0.66
CLPB-208ENST00000538021 RIMS1Q86UR5 1692 aaKnown RBP19.16■□□□□ 0.66
CLPB-208ENST00000538021 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
CLPB-208ENST00000538021 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
CLPB-208ENST00000538021 CERKQ8TCT0 537 aa19.13■□□□□ 0.65
CLPB-208ENST00000538021 ARHGEF40Q8TER5 1519 aa19.1■□□□□ 0.65
CLPB-208ENST00000538021 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
CLPB-208ENST00000538021 RAPGEF6Q8TEU7 1601 aa19.08■□□□□ 0.65
CLPB-208ENST00000538021 POGZQ7Z3K3 1410 aa19.07■□□□□ 0.64
CLPB-208ENST00000538021 MLECQ14165 292 aa19.06■□□□□ 0.64
CLPB-208ENST00000538021 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
CLPB-208ENST00000538021 FANCAO15360 1455 aa19.04■□□□□ 0.64
CLPB-208ENST00000538021 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
CLPB-208ENST00000538021 RICTORQ6R327 1708 aa19.03■□□□□ 0.64
CLPB-208ENST00000538021 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
CLPB-208ENST00000538021 SAMD9Q5K651 1589 aa19.02■□□□□ 0.64
CLPB-208ENST00000538021 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
CLPB-208ENST00000538021 NUP153P49790 1475 aaKnown RBP19.02■□□□□ 0.63
CLPB-208ENST00000538021 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
CLPB-208ENST00000538021 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
CLPB-208ENST00000538021 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
CLPB-208ENST00000538021 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
CLPB-208ENST00000538021 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
CLPB-208ENST00000538021 EFCAB5A4FU69 1503 aa18.97■□□□□ 0.63
CLPB-208ENST00000538021 SOCS7O14512 581 aa18.97■□□□□ 0.63
CLPB-208ENST00000538021 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
CLPB-208ENST00000538021 FER1L4A9Z1Z3 1794 aa18.96■□□□□ 0.63
CLPB-208ENST00000538021 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
CLPB-208ENST00000538021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLPB-208ENST00000538021 MAGI2Q86UL8 1455 aa18.93■□□□□ 0.62
CLPB-208ENST00000538021 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms