RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ECM2O94769 699 aaPredicted RBP5.41□□□□□ -1.54
TNFRSF1A-210ENST00000537842 ZRANB1Q9UGI0 708 aa5.4□□□□□ -1.54
TNFRSF1A-210ENST00000537842 PYGBP11216 843 aa5.39□□□□□ -1.55
TNFRSF1A-210ENST00000537842 PKD2Q13563 968 aa5.39□□□□□ -1.55
TNFRSF1A-210ENST00000537842 GSE1Q14687 1217 aa5.39□□□□□ -1.55
TNFRSF1A-210ENST00000537842 POTEHQ6S545 545 aa5.39□□□□□ -1.55
TNFRSF1A-210ENST00000537842 PHF12Q96QT6 1004 aa5.37□□□□□ -1.55
TNFRSF1A-210ENST00000537842 RGL2O15211 777 aa5.35□□□□□ -1.55
TNFRSF1A-210ENST00000537842 SLC24A1O60721 1099 aa5.35□□□□□ -1.55
TNFRSF1A-210ENST00000537842 C19orf67A6NJJ6 358 aa5.32□□□□□ -1.56
TNFRSF1A-210ENST00000537842 PCDHB13Q9Y5F0 798 aa5.32□□□□□ -1.56
TNFRSF1A-210ENST00000537842 CCDC61Q9Y6R9 512 aa5.32□□□□□ -1.56
TNFRSF1A-210ENST00000537842 TRIM41Q8WV44 630 aa5.31□□□□□ -1.56
TNFRSF1A-210ENST00000537842 PCDHB8Q9UN66 801 aa5.31□□□□□ -1.56
TNFRSF1A-210ENST00000537842 MAP3K13O43283 966 aa5.3□□□□□ -1.56
TNFRSF1A-210ENST00000537842 EVX2Q03828 476 aa5.3□□□□□ -1.56
TNFRSF1A-210ENST00000537842 RNF25Q96BH1 459 aaPredicted RBP5.3□□□□□ -1.56
TNFRSF1A-210ENST00000537842 ABCC9O60706 1549 aa5.29□□□□□ -1.56
TNFRSF1A-210ENST00000537842 RIOK3O14730 519 aaKnown RBP5.29□□□□□ -1.56
TNFRSF1A-210ENST00000537842 CHGAP10645 457 aaKnown RBP5.28□□□□□ -1.56
TNFRSF1A-210ENST00000537842 ZNF579Q8NAF0 562 aaKnown RBP5.28□□□□□ -1.56
TNFRSF1A-210ENST00000537842 MS4A3Q96HJ5 214 aa5.28□□□□□ -1.56
TNFRSF1A-210ENST00000537842 IFNL1Q8IU54 200 aa5.27□□□□□ -1.57
TNFRSF1A-210ENST00000537842 KIF12Q96FN5 646 aa5.27□□□□□ -1.57
TNFRSF1A-210ENST00000537842 STK25O00506 426 aa5.26□□□□□ -1.57
TNFRSF1A-210ENST00000537842 ZNF467Q7Z7K2 595 aaPredicted RBP5.26□□□□□ -1.57
TNFRSF1A-210ENST00000537842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.25□□□□□ -1.57
TNFRSF1A-210ENST00000537842 GALR2O43603 387 aaPredicted RBP5.25□□□□□ -1.57
TNFRSF1A-210ENST00000537842 ZFP91Q96JP5 570 aaPredicted RBP5.25□□□□□ -1.57
TNFRSF1A-210ENST00000537842 STK24Q9Y6E0 443 aa5.25□□□□□ -1.57
TNFRSF1A-210ENST00000537842 CCDC180Q9P1Z9 1646 aa5.25□□□□□ -1.57
TNFRSF1A-210ENST00000537842 VGFO15240 615 aaPredicted RBP5.24□□□□□ -1.57
TNFRSF1A-210ENST00000537842 BCL11BQ9C0K0 894 aaPredicted RBP5.24□□□□□ -1.57
TNFRSF1A-210ENST00000537842 TRPC6Q9Y210 931 aa5.24□□□□□ -1.57
TNFRSF1A-210ENST00000537842 PSEN1P49768 467 aa5.23□□□□□ -1.57
TNFRSF1A-210ENST00000537842 PDAP1Q13442 181 aaKnown RBP5.23□□□□□ -1.57
TNFRSF1A-210ENST00000537842 TAOK2Q9UL54 1235 aa5.23□□□□□ -1.57
TNFRSF1A-210ENST00000537842 CHRM1P11229 460 aaPredicted RBP5.22□□□□□ -1.57
TNFRSF1A-210ENST00000537842 GOLGA2Q08379 1002 aa5.22□□□□□ -1.57
TNFRSF1A-210ENST00000537842 TMEM106CQ9BVX2 250 aa5.22□□□□□ -1.57
TNFRSF1A-210ENST00000537842 CABP2Q9NPB3 220 aa5.21□□□□□ -1.58
TNFRSF1A-210ENST00000537842 GABBR2O75899 941 aa5.2□□□□□ -1.58
TNFRSF1A-210ENST00000537842 SP7Q8TDD2 431 aaPredicted RBP5.2□□□□□ -1.58
TNFRSF1A-210ENST00000537842 DCBLD2Q96PD2 775 aa5.19□□□□□ -1.58
TNFRSF1A-210ENST00000537842 HS6ST3Q8IZP7 471 aa5.18□□□□□ -1.58
TNFRSF1A-210ENST00000537842 CFAP44Q96MT7 982 aa5.18□□□□□ -1.58
TNFRSF1A-210ENST00000537842 SGIP1Q9BQI5 828 aa5.18□□□□□ -1.58
TNFRSF1A-210ENST00000537842 BMP2KQ9NSY1 1161 aaPredicted RBP5.17□□□□□ -1.58
TNFRSF1A-210ENST00000537842 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
TNFRSF1A-210ENST00000537842 TTLL13PA6NNM8 815 aa5.16□□□□□ -1.58
TNFRSF1A-210ENST00000537842 PAXIP1Q6ZW49 1069 aaPredicted RBP5.16□□□□□ -1.58
TNFRSF1A-210ENST00000537842 TRIM35Q9UPQ4 493 aa5.16□□□□□ -1.58
TNFRSF1A-210ENST00000537842 TIE1P35590 1138 aa5.15□□□□□ -1.59
TNFRSF1A-210ENST00000537842 MKRN3Q13064 507 aaKnown RBP5.15□□□□□ -1.59
TNFRSF1A-210ENST00000537842 EFCAB3Q8N7B9 438 aa5.15□□□□□ -1.59
TNFRSF1A-210ENST00000537842 ATN1P54259 1190 aaPredicted RBP5.14□□□□□ -1.59
TNFRSF1A-210ENST00000537842 BBXQ8WY36 941 aaPredicted RBP5.13□□□□□ -1.59
TNFRSF1A-210ENST00000537842 ATMINO43313 823 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF1A-210ENST00000537842 HAP1P54257 671 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF1A-210ENST00000537842 NKX1-1Q15270 411 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF1A-210ENST00000537842 PHF8Q9UPP1 1060 aa5.12□□□□□ -1.59
TNFRSF1A-210ENST00000537842 CLCN6P51797 869 aa5.11□□□□□ -1.59
TNFRSF1A-210ENST00000537842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.11□□□□□ -1.59
TNFRSF1A-210ENST00000537842 SEC24BO95487 1268 aa5.1□□□□□ -1.59
TNFRSF1A-210ENST00000537842 PLCB2Q00722 1185 aa5.1□□□□□ -1.59
TNFRSF1A-210ENST00000537842 SPRYD3Q8NCJ5 442 aa5.1□□□□□ -1.59
TNFRSF1A-210ENST00000537842 PLCG2P16885 1265 aa5.09□□□□□ -1.59
TNFRSF1A-210ENST00000537842 ASTLQ6HA08 431 aaPredicted RBP5.09□□□□□ -1.59
TNFRSF1A-210ENST00000537842 MFRPQ9BY79 579 aa5.09□□□□□ -1.59
TNFRSF1A-210ENST00000537842 PELP1Q8IZL8 1130 aaKnown RBP5.08□□□□□ -1.6
TNFRSF1A-210ENST00000537842 METRNQ9UJH8 293 aa5.08□□□□□ -1.6
TNFRSF1A-210ENST00000537842 POTEIP0CG38 1075 aa5.07□□□□□ -1.6
TNFRSF1A-210ENST00000537842 NLRP6P59044 892 aa5.07□□□□□ -1.6
TNFRSF1A-210ENST00000537842 G3V3G9 751 aa5.06□□□□□ -1.6
TNFRSF1A-210ENST00000537842 SOX12O15370 315 aa5.05□□□□□ -1.6
TNFRSF1A-210ENST00000537842 GTPBP6O43824 516 aaPredicted RBP5.05□□□□□ -1.6
TNFRSF1A-210ENST00000537842 DPY19L2Q6NUT2 758 aa5.05□□□□□ -1.6
TNFRSF1A-210ENST00000537842 SLC39A7Q92504 469 aa5.05□□□□□ -1.6
TNFRSF1A-210ENST00000537842 RYDENQ9NUL5 291 aaKnown RBP5.05□□□□□ -1.6
TNFRSF1A-210ENST00000537842 PPP1R37O75864 691 aa5.04□□□□□ -1.6
TNFRSF1A-210ENST00000537842 MS4A4AQ96JQ5 239 aa5.04□□□□□ -1.6
TNFRSF1A-210ENST00000537842 COLQQ9Y215 455 aaPredicted RBP5.04□□□□□ -1.6
TNFRSF1A-210ENST00000537842 ZCCHC6Q5VYS8 1495 aaKnown RBP5.03□□□□□ -1.6
TNFRSF1A-210ENST00000537842 IER5LQ5T953 404 aa5.03□□□□□ -1.6
TNFRSF1A-210ENST00000537842 FBXO22Q8NEZ5 403 aa5.03□□□□□ -1.6
TNFRSF1A-210ENST00000537842 OCEL1Q9H607 264 aa5.03□□□□□ -1.6
TNFRSF1A-210ENST00000537842 TSHZ2Q9NRE2 1034 aa5.03□□□□□ -1.6
TNFRSF1A-210ENST00000537842 IRX5P78411 483 aaPredicted RBP5.02□□□□□ -1.61
TNFRSF1A-210ENST00000537842 PDCD7Q8N8D1 485 aaKnown RBP5.02□□□□□ -1.61
TNFRSF1A-210ENST00000537842 C7P10643 843 aa5.01□□□□□ -1.61
TNFRSF1A-210ENST00000537842 DNAJC5Q9H3Z4 198 aa5.01□□□□□ -1.61
TNFRSF1A-210ENST00000537842 C3orf67Q6ZVT6 689 aa5□□□□□ -1.61
TNFRSF1A-210ENST00000537842 NACADO15069 1562 aa4.99□□□□□ -1.61
TNFRSF1A-210ENST00000537842 MICALL2Q8IY33 904 aa4.99□□□□□ -1.61
TNFRSF1A-210ENST00000537842 BOLA1Q9Y3E2 137 aa4.99□□□□□ -1.61
TNFRSF1A-210ENST00000537842 RB1CC1Q8TDY2 1594 aa4.99□□□□□ -1.61
TNFRSF1A-210ENST00000537842 POTEFA5A3E0 1075 aa4.98□□□□□ -1.61
TNFRSF1A-210ENST00000537842 CADPS2Q86UW7 1296 aa4.98□□□□□ -1.61
TNFRSF1A-210ENST00000537842 MYO15BQ96JP2 1530 aa4.97□□□□□ -1.61
TNFRSF1A-210ENST00000537842 DCAF1Q9Y4B6 1507 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms