RNA–Protein interactions for RNA: ENST00000536975.5

C12orf56-203, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-203ENST00000536975 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
C12orf56-203ENST00000536975 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
C12orf56-203ENST00000536975 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
C12orf56-203ENST00000536975 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
C12orf56-203ENST00000536975 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
C12orf56-203ENST00000536975 C7P10643 843 aa12.37□□□□□ -0.43
C12orf56-203ENST00000536975 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
C12orf56-203ENST00000536975 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
C12orf56-203ENST00000536975 MIER1Q8N108 512 aa12.3□□□□□ -0.44
C12orf56-203ENST00000536975 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
C12orf56-203ENST00000536975 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
C12orf56-203ENST00000536975 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
C12orf56-203ENST00000536975 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
C12orf56-203ENST00000536975 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
C12orf56-203ENST00000536975 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
C12orf56-203ENST00000536975 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
C12orf56-203ENST00000536975 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
C12orf56-203ENST00000536975 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
C12orf56-203ENST00000536975 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
C12orf56-203ENST00000536975 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
C12orf56-203ENST00000536975 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
C12orf56-203ENST00000536975 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
C12orf56-203ENST00000536975 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
C12orf56-203ENST00000536975 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
C12orf56-203ENST00000536975 NUBP1P53384 320 aa12□□□□□ -0.49
C12orf56-203ENST00000536975 ST18O60284 1047 aa11.98□□□□□ -0.49
C12orf56-203ENST00000536975 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
C12orf56-203ENST00000536975 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
C12orf56-203ENST00000536975 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
C12orf56-203ENST00000536975 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
C12orf56-203ENST00000536975 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
C12orf56-203ENST00000536975 MAP3K13O43283 966 aa11.9□□□□□ -0.5
C12orf56-203ENST00000536975 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
C12orf56-203ENST00000536975 SEC24BO95487 1268 aa11.89□□□□□ -0.51
C12orf56-203ENST00000536975 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
C12orf56-203ENST00000536975 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
C12orf56-203ENST00000536975 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
C12orf56-203ENST00000536975 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
C12orf56-203ENST00000536975 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
C12orf56-203ENST00000536975 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
C12orf56-203ENST00000536975 PYGBP11216 843 aa11.78□□□□□ -0.52
C12orf56-203ENST00000536975 BMP2KQ9NSY1 1161 aaPredicted RBP11.78□□□□□ -0.52
C12orf56-203ENST00000536975 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
C12orf56-203ENST00000536975 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
C12orf56-203ENST00000536975 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
C12orf56-203ENST00000536975 TIE1P35590 1138 aa11.74□□□□□ -0.53
C12orf56-203ENST00000536975 GSE1Q14687 1217 aa11.73□□□□□ -0.53
C12orf56-203ENST00000536975 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
C12orf56-203ENST00000536975 SNPHO15079 494 aa11.71□□□□□ -0.53
C12orf56-203ENST00000536975 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
C12orf56-203ENST00000536975 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
C12orf56-203ENST00000536975 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
C12orf56-203ENST00000536975 IER5LQ5T953 404 aa11.67□□□□□ -0.54
C12orf56-203ENST00000536975 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
C12orf56-203ENST00000536975 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
C12orf56-203ENST00000536975 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
C12orf56-203ENST00000536975 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
C12orf56-203ENST00000536975 ZNF467Q7Z7K2 595 aaPredicted RBP11.57□□□□□ -0.56
C12orf56-203ENST00000536975 EMP3P54852 163 aa11.55□□□□□ -0.56
C12orf56-203ENST00000536975 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
C12orf56-203ENST00000536975 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
C12orf56-203ENST00000536975 PLCG2P16885 1265 aa11.51□□□□□ -0.57
C12orf56-203ENST00000536975 PSEN1P49768 467 aa11.49□□□□□ -0.57
C12orf56-203ENST00000536975 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
C12orf56-203ENST00000536975 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
C12orf56-203ENST00000536975 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
C12orf56-203ENST00000536975 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
C12orf56-203ENST00000536975 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
C12orf56-203ENST00000536975 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
C12orf56-203ENST00000536975 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
C12orf56-203ENST00000536975 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
C12orf56-203ENST00000536975 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
C12orf56-203ENST00000536975 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
C12orf56-203ENST00000536975 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
C12orf56-203ENST00000536975 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
C12orf56-203ENST00000536975 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
C12orf56-203ENST00000536975 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
C12orf56-203ENST00000536975 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
C12orf56-203ENST00000536975 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
C12orf56-203ENST00000536975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.6
C12orf56-203ENST00000536975 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
C12orf56-203ENST00000536975 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
C12orf56-203ENST00000536975 PKD2Q13563 968 aa11.3□□□□□ -0.6
C12orf56-203ENST00000536975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
C12orf56-203ENST00000536975 ZFP91Q96JP5 570 aaPredicted RBP11.29□□□□□ -0.6
C12orf56-203ENST00000536975 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
C12orf56-203ENST00000536975 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
C12orf56-203ENST00000536975 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
C12orf56-203ENST00000536975 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
C12orf56-203ENST00000536975 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
C12orf56-203ENST00000536975 RGL2O15211 777 aa11.23□□□□□ -0.61
C12orf56-203ENST00000536975 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
C12orf56-203ENST00000536975 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
C12orf56-203ENST00000536975 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
C12orf56-203ENST00000536975 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
C12orf56-203ENST00000536975 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
C12orf56-203ENST00000536975 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
C12orf56-203ENST00000536975 STK25O00506 426 aa11.15□□□□□ -0.62
C12orf56-203ENST00000536975 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
C12orf56-203ENST00000536975 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms