RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
CCDC60-203ENST00000536742 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CCDC60-203ENST00000536742 PHF12Q96QT6 1004 aa15.16■□□□□ 0.02
CCDC60-203ENST00000536742 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
CCDC60-203ENST00000536742 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
CCDC60-203ENST00000536742 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
CCDC60-203ENST00000536742 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
CCDC60-203ENST00000536742 KLHL34Q8N239 644 aa15.08■□□□□ 0
CCDC60-203ENST00000536742 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
CCDC60-203ENST00000536742 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
CCDC60-203ENST00000536742 NUBP1P53384 320 aa15.03■□□□□ -0
CCDC60-203ENST00000536742 SPOCK2Q92563 424 aa15.02■□□□□ -0
CCDC60-203ENST00000536742 FAM212AQ96EL1 285 aa15.02■□□□□ -0
CCDC60-203ENST00000536742 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
CCDC60-203ENST00000536742 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
CCDC60-203ENST00000536742 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
CCDC60-203ENST00000536742 DCAF8Q5TAQ9 597 aa14.94□□□□□ -0.02
CCDC60-203ENST00000536742 KIF12Q96FN5 646 aa14.94□□□□□ -0.02
CCDC60-203ENST00000536742 MAP3K13O43283 966 aa14.89□□□□□ -0.03
CCDC60-203ENST00000536742 NACADO15069 1562 aa14.88□□□□□ -0.03
CCDC60-203ENST00000536742 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
CCDC60-203ENST00000536742 GSE1Q14687 1217 aa14.83□□□□□ -0.04
CCDC60-203ENST00000536742 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
CCDC60-203ENST00000536742 PCDHB13Q9Y5F0 798 aa14.83□□□□□ -0.04
CCDC60-203ENST00000536742 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
CCDC60-203ENST00000536742 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
CCDC60-203ENST00000536742 LHX8Q68G74 356 aa14.78□□□□□ -0.04
CCDC60-203ENST00000536742 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
CCDC60-203ENST00000536742 ASTLQ6HA08 431 aaPredicted RBP14.77□□□□□ -0.05
CCDC60-203ENST00000536742 CUX2O14529 1486 aa14.76□□□□□ -0.05
CCDC60-203ENST00000536742 PYGBP11216 843 aa14.76□□□□□ -0.05
CCDC60-203ENST00000536742 ATMINO43313 823 aaPredicted RBP14.75□□□□□ -0.05
CCDC60-203ENST00000536742 PKD2Q13563 968 aa14.74□□□□□ -0.05
CCDC60-203ENST00000536742 TIE1P35590 1138 aa14.72□□□□□ -0.05
CCDC60-203ENST00000536742 IFNL1Q8IU54 200 aa14.71□□□□□ -0.05
CCDC60-203ENST00000536742 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
CCDC60-203ENST00000536742 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-203ENST00000536742 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
CCDC60-203ENST00000536742 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
CCDC60-203ENST00000536742 ATN1P54259 1190 aaPredicted RBP14.68□□□□□ -0.06
CCDC60-203ENST00000536742 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
CCDC60-203ENST00000536742 C7P10643 843 aa14.66□□□□□ -0.06
CCDC60-203ENST00000536742 ECM2O94769 699 aaPredicted RBP14.64□□□□□ -0.07
CCDC60-203ENST00000536742 METRNQ9UJH8 293 aa14.64□□□□□ -0.07
CCDC60-203ENST00000536742 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
CCDC60-203ENST00000536742 CHRM1P11229 460 aaPredicted RBP14.62□□□□□ -0.07
CCDC60-203ENST00000536742 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
CCDC60-203ENST00000536742 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
CCDC60-203ENST00000536742 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
CCDC60-203ENST00000536742 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
CCDC60-203ENST00000536742 TRIM35Q9UPQ4 493 aa14.55□□□□□ -0.08
CCDC60-203ENST00000536742 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
CCDC60-203ENST00000536742 SEC24BO95487 1268 aa14.52□□□□□ -0.09
CCDC60-203ENST00000536742 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
CCDC60-203ENST00000536742 IER5LQ5T953 404 aa14.49□□□□□ -0.09
CCDC60-203ENST00000536742 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
CCDC60-203ENST00000536742 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.09
CCDC60-203ENST00000536742 RGL2O15211 777 aa14.43□□□□□ -0.1
CCDC60-203ENST00000536742 PSEN1P49768 467 aa14.43□□□□□ -0.1
CCDC60-203ENST00000536742 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
CCDC60-203ENST00000536742 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
CCDC60-203ENST00000536742 MAMSTRQ6ZN01 415 aa14.41□□□□□ -0.1
CCDC60-203ENST00000536742 COLQQ9Y215 455 aaPredicted RBP14.39□□□□□ -0.11
CCDC60-203ENST00000536742 PLCG2P16885 1265 aa14.38□□□□□ -0.11
CCDC60-203ENST00000536742 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
CCDC60-203ENST00000536742 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
CCDC60-203ENST00000536742 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
CCDC60-203ENST00000536742 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
CCDC60-203ENST00000536742 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
CCDC60-203ENST00000536742 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
CCDC60-203ENST00000536742 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
CCDC60-203ENST00000536742 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
CCDC60-203ENST00000536742 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
CCDC60-203ENST00000536742 IRX5P78411 483 aaPredicted RBP14.3□□□□□ -0.12
CCDC60-203ENST00000536742 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
CCDC60-203ENST00000536742 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
CCDC60-203ENST00000536742 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
CCDC60-203ENST00000536742 CABP2Q9NPB3 220 aa14.26□□□□□ -0.13
CCDC60-203ENST00000536742 HS6ST3Q8IZP7 471 aa14.24□□□□□ -0.13
CCDC60-203ENST00000536742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC60-203ENST00000536742 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-203ENST00000536742 CHGAP10645 457 aaKnown RBP14.2□□□□□ -0.14
CCDC60-203ENST00000536742 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
CCDC60-203ENST00000536742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-203ENST00000536742 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
CCDC60-203ENST00000536742 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-203ENST00000536742 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
CCDC60-203ENST00000536742 L3MBTL3Q96JM7 780 aaPredicted RBP14.14□□□□□ -0.15
CCDC60-203ENST00000536742 STK25O00506 426 aa14.12□□□□□ -0.15
CCDC60-203ENST00000536742 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
CCDC60-203ENST00000536742 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
CCDC60-203ENST00000536742 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
CCDC60-203ENST00000536742 G3V3G9 751 aa14.08□□□□□ -0.16
CCDC60-203ENST00000536742 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
CCDC60-203ENST00000536742 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-203ENST00000536742 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-203ENST00000536742 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
CCDC60-203ENST00000536742 SOX12O15370 315 aa14.03□□□□□ -0.16
CCDC60-203ENST00000536742 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
CCDC60-203ENST00000536742 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms