RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
MDM1-206ENST00000536313 TTBK1Q5TCY1 1321 aaPredicted RBP8.59□□□□□ -1.03
MDM1-206ENST00000536313 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
MDM1-206ENST00000536313 BBXQ8WY36 941 aaPredicted RBP8.57□□□□□ -1.04
MDM1-206ENST00000536313 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
MDM1-206ENST00000536313 NBR1Q14596 966 aa8.54□□□□□ -1.04
MDM1-206ENST00000536313 FBXO3Q9UK99 471 aa8.54□□□□□ -1.04
MDM1-206ENST00000536313 PAXIP1Q6ZW49 1069 aaPredicted RBP8.53□□□□□ -1.04
MDM1-206ENST00000536313 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
MDM1-206ENST00000536313 NPM2Q86SE8 214 aaKnown RBP8.52□□□□□ -1.05
MDM1-206ENST00000536313 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
MDM1-206ENST00000536313 MYT1Q01538 1121 aa8.5□□□□□ -1.05
MDM1-206ENST00000536313 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
MDM1-206ENST00000536313 CFAP44Q96MT7 982 aa8.49□□□□□ -1.05
MDM1-206ENST00000536313 PKD2Q13563 968 aa8.48□□□□□ -1.05
MDM1-206ENST00000536313 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
MDM1-206ENST00000536313 CUX2O14529 1486 aa8.46□□□□□ -1.05
MDM1-206ENST00000536313 ZCCHC6Q5VYS8 1495 aaKnown RBP8.46□□□□□ -1.05
MDM1-206ENST00000536313 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
MDM1-206ENST00000536313 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
MDM1-206ENST00000536313 DCAF1Q9Y4B6 1507 aa8.45□□□□□ -1.06
MDM1-206ENST00000536313 FXR2P51116 673 aaKnown RBP eCLIP8.45□□□□□ -1.06
MDM1-206ENST00000536313 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
MDM1-206ENST00000536313 SUPT5HO00267 1087 aaKnown RBP8.4□□□□□ -1.06
MDM1-206ENST00000536313 NPM1P06748 294 aaKnown RBP eCLIP8.39□□□□□ -1.07
MDM1-206ENST00000536313 SPRYD3Q8NCJ5 442 aa8.39□□□□□ -1.07
MDM1-206ENST00000536313 VASPP50552 380 aaPredicted RBP8.38□□□□□ -1.07
MDM1-206ENST00000536313 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
MDM1-206ENST00000536313 ERCC6Q03468 1493 aa8.38□□□□□ -1.07
MDM1-206ENST00000536313 PRR29P0C7W0 189 aa8.36□□□□□ -1.07
MDM1-206ENST00000536313 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
MDM1-206ENST00000536313 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
MDM1-206ENST00000536313 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
MDM1-206ENST00000536313 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
MDM1-206ENST00000536313 UBTFP17480 764 aaKnown RBP8.31□□□□□ -1.08
MDM1-206ENST00000536313 PROM2Q8N271 834 aa8.31□□□□□ -1.08
MDM1-206ENST00000536313 HRCP23327 699 aa8.28□□□□□ -1.08
MDM1-206ENST00000536313 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
MDM1-206ENST00000536313 NCAPD3P42695 1498 aa8.27□□□□□ -1.09
MDM1-206ENST00000536313 NESP48681 1621 aa8.27□□□□□ -1.09
MDM1-206ENST00000536313 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
MDM1-206ENST00000536313 HAX1O00165 279 aa8.23□□□□□ -1.09
MDM1-206ENST00000536313 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
MDM1-206ENST00000536313 ATAD2BQ9ULI0 1458 aa8.2□□□□□ -1.1
MDM1-206ENST00000536313 CREBZFQ9NS37 354 aa8.2□□□□□ -1.1
MDM1-206ENST00000536313 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
MDM1-206ENST00000536313 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
MDM1-206ENST00000536313 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
MDM1-206ENST00000536313 EVX2Q03828 476 aa8.14□□□□□ -1.11
MDM1-206ENST00000536313 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
MDM1-206ENST00000536313 HMGXB3Q12766 1538 aa8.13□□□□□ -1.11
MDM1-206ENST00000536313 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
MDM1-206ENST00000536313 CCDC9Q9Y3X0 531 aaKnown RBP8.12□□□□□ -1.11
MDM1-206ENST00000536313 RGL2O15211 777 aa8.11□□□□□ -1.11
MDM1-206ENST00000536313 BAZ1BQ9UIG0 1483 aaKnown RBP8.08□□□□□ -1.12
MDM1-206ENST00000536313 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
MDM1-206ENST00000536313 MNX1P50219 401 aaPredicted RBP8.08□□□□□ -1.12
MDM1-206ENST00000536313 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
MDM1-206ENST00000536313 PDS5BQ9NTI5 1447 aa8.08□□□□□ -1.12
MDM1-206ENST00000536313 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
MDM1-206ENST00000536313 EIF5BO60841 1220 aaKnown RBP8.06□□□□□ -1.12
MDM1-206ENST00000536313 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
MDM1-206ENST00000536313 CHGAP10645 457 aaKnown RBP8.05□□□□□ -1.12
MDM1-206ENST00000536313 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
MDM1-206ENST00000536313 MIER1Q8N108 512 aa8.04□□□□□ -1.12
MDM1-206ENST00000536313 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
MDM1-206ENST00000536313 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
MDM1-206ENST00000536313 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
MDM1-206ENST00000536313 MRC2Q9UBG0 1479 aa8.03□□□□□ -1.12
MDM1-206ENST00000536313 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
MDM1-206ENST00000536313 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
MDM1-206ENST00000536313 WDR62O43379 1518 aa8.02□□□□□ -1.13
MDM1-206ENST00000536313 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
MDM1-206ENST00000536313 CADPSQ9ULU8 1353 aa8.01□□□□□ -1.13
MDM1-206ENST00000536313 PLCD3Q8N3E9 789 aa8.01□□□□□ -1.13
MDM1-206ENST00000536313 ZRANB1Q9UGI0 708 aa8□□□□□ -1.13
MDM1-206ENST00000536313 PEG3Q9GZU2 1588 aa8□□□□□ -1.13
MDM1-206ENST00000536313 GABBR2O75899 941 aa7.99□□□□□ -1.13
MDM1-206ENST00000536313 PAK3O75914 559 aaPredicted RBP7.99□□□□□ -1.13
MDM1-206ENST00000536313 NEUROD2Q15784 382 aa7.98□□□□□ -1.13
MDM1-206ENST00000536313 ZNF579Q8NAF0 562 aaKnown RBP7.98□□□□□ -1.13
MDM1-206ENST00000536313 LMOD2Q6P5Q4 547 aa7.97□□□□□ -1.13
MDM1-206ENST00000536313 CLCN6P51797 869 aa7.96□□□□□ -1.14
MDM1-206ENST00000536313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.96□□□□□ -1.14
MDM1-206ENST00000536313 ZBTB47Q9UFB7 747 aaPredicted RBP7.96□□□□□ -1.14
MDM1-206ENST00000536313 HS6ST3Q8IZP7 471 aa7.95□□□□□ -1.14
MDM1-206ENST00000536313 MROH2BQ7Z745 1585 aa7.95□□□□□ -1.14
MDM1-206ENST00000536313 RIMBP3CA6NJZ7 1639 aa7.94□□□□□ -1.14
MDM1-206ENST00000536313 RIMBP3BA6NNM3 1639 aa7.94□□□□□ -1.14
MDM1-206ENST00000536313 RIMBP3Q9UFD9 1639 aa7.94□□□□□ -1.14
MDM1-206ENST00000536313 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
MDM1-206ENST00000536313 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
MDM1-206ENST00000536313 ARID3AQ99856 593 aa7.93□□□□□ -1.14
MDM1-206ENST00000536313 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
MDM1-206ENST00000536313 ARHGEF11O15085 1522 aa7.92□□□□□ -1.14
MDM1-206ENST00000536313 HMGB1P09429 215 aaKnown RBP7.91□□□□□ -1.14
MDM1-206ENST00000536313 CYB5RLQ6IPT4 315 aa7.91□□□□□ -1.14
MDM1-206ENST00000536313 FANCD2Q9BXW9 1451 aa7.91□□□□□ -1.14
MDM1-206ENST00000536313 PHF12Q96QT6 1004 aa7.9□□□□□ -1.14
MDM1-206ENST00000536313 TSPYL2Q9H2G4 693 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms