RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 ARXQ96QS3 562 aa12.59□□□□□ -0.39
TNC-210ENST00000535648 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
TNC-210ENST00000535648 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.39
TNC-210ENST00000535648 BECN1Q14457 450 aa12.58□□□□□ -0.4
TNC-210ENST00000535648 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
TNC-210ENST00000535648 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
TNC-210ENST00000535648 MIER1Q8N108 512 aa12.53□□□□□ -0.4
TNC-210ENST00000535648 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
TNC-210ENST00000535648 TRIM44Q96DX7 344 aaPredicted RBP12.51□□□□□ -0.41
TNC-210ENST00000535648 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
TNC-210ENST00000535648 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
TNC-210ENST00000535648 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
TNC-210ENST00000535648 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
TNC-210ENST00000535648 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
TNC-210ENST00000535648 CLIP1P30622 1438 aa12.49□□□□□ -0.41
TNC-210ENST00000535648 CASC1Q6TDU7 716 aa12.48□□□□□ -0.41
TNC-210ENST00000535648 PPP1R15AO75807 674 aaPredicted RBP12.47□□□□□ -0.41
TNC-210ENST00000535648 C14orf37Q86TY3 774 aa12.46□□□□□ -0.41
TNC-210ENST00000535648 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
TNC-210ENST00000535648 CDCA8Q53HL2 280 aa12.45□□□□□ -0.42
TNC-210ENST00000535648 ZRSR1Q15695 479 aaKnown RBP12.44□□□□□ -0.42
TNC-210ENST00000535648 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
TNC-210ENST00000535648 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
TNC-210ENST00000535648 HIRIP3Q9BW71 556 aaPredicted RBP12.43□□□□□ -0.42
TNC-210ENST00000535648 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
TNC-210ENST00000535648 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
TNC-210ENST00000535648 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
TNC-210ENST00000535648 EEA1Q15075 1411 aa12.4□□□□□ -0.42
TNC-210ENST00000535648 PTMAP06454 111 aaKnown RBP12.4□□□□□ -0.43
TNC-210ENST00000535648 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
TNC-210ENST00000535648 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
TNC-210ENST00000535648 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
TNC-210ENST00000535648 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
TNC-210ENST00000535648 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
TNC-210ENST00000535648 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
TNC-210ENST00000535648 RGL3Q3MIN7 710 aa12.35□□□□□ -0.43
TNC-210ENST00000535648 PPM1GO15355 546 aaPredicted RBP12.35□□□□□ -0.43
TNC-210ENST00000535648 DNTTIP2Q5QJE6 756 aaKnown RBP12.35□□□□□ -0.43
TNC-210ENST00000535648 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
TNC-210ENST00000535648 MAPK8IP3Q9UPT6 1336 aa12.34□□□□□ -0.43
TNC-210ENST00000535648 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
TNC-210ENST00000535648 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
TNC-210ENST00000535648 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
TNC-210ENST00000535648 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
TNC-210ENST00000535648 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
TNC-210ENST00000535648 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
TNC-210ENST00000535648 MS4A1P11836 297 aa12.3□□□□□ -0.44
TNC-210ENST00000535648 CFDP1Q9UEE9 299 aaPredicted RBP12.3□□□□□ -0.44
TNC-210ENST00000535648 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
TNC-210ENST00000535648 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
TNC-210ENST00000535648 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
TNC-210ENST00000535648 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
TNC-210ENST00000535648 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.44
TNC-210ENST00000535648 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.44
TNC-210ENST00000535648 KIF27Q86VH2 1401 aa12.27□□□□□ -0.44
TNC-210ENST00000535648 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
TNC-210ENST00000535648 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
TNC-210ENST00000535648 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
TNC-210ENST00000535648 RBM19Q9Y4C8 960 aaKnown RBP12.26□□□□□ -0.45
TNC-210ENST00000535648 POGKQ9P215 609 aa12.26□□□□□ -0.45
TNC-210ENST00000535648 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
TNC-210ENST00000535648 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
TNC-210ENST00000535648 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
TNC-210ENST00000535648 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
TNC-210ENST00000535648 FGD1P98174 961 aa12.23□□□□□ -0.45
TNC-210ENST00000535648 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
TNC-210ENST00000535648 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
TNC-210ENST00000535648 NRDCO43847 1150 aa12.23□□□□□ -0.45
TNC-210ENST00000535648 NPHP1O15259 732 aa12.23□□□□□ -0.45
TNC-210ENST00000535648 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
TNC-210ENST00000535648 RGS3P49796 1198 aa12.22□□□□□ -0.45
TNC-210ENST00000535648 KCNJ4P48050 445 aa12.22□□□□□ -0.45
TNC-210ENST00000535648 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
TNC-210ENST00000535648 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
TNC-210ENST00000535648 SENP3-EIF4A1A0A087X0R7 540 aa12.21□□□□□ -0.46
TNC-210ENST00000535648 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
TNC-210ENST00000535648 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
TNC-210ENST00000535648 KANK1Q14678 1352 aa12.2□□□□□ -0.46
TNC-210ENST00000535648 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
TNC-210ENST00000535648 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
TNC-210ENST00000535648 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
TNC-210ENST00000535648 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
TNC-210ENST00000535648 TMF1P82094 1093 aa12.19□□□□□ -0.46
TNC-210ENST00000535648 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
TNC-210ENST00000535648 NACADO15069 1562 aa12.18□□□□□ -0.46
TNC-210ENST00000535648 MCCP23508 829 aa12.18□□□□□ -0.46
TNC-210ENST00000535648 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
TNC-210ENST00000535648 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
TNC-210ENST00000535648 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
TNC-210ENST00000535648 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
TNC-210ENST00000535648 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
TNC-210ENST00000535648 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
TNC-210ENST00000535648 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
TNC-210ENST00000535648 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
TNC-210ENST00000535648 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
TNC-210ENST00000535648 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
TNC-210ENST00000535648 MSNP26038 577 aaKnown RBP12.12□□□□□ -0.47
TNC-210ENST00000535648 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
TNC-210ENST00000535648 DCAF11Q8TEB1 546 aa12.11□□□□□ -0.47
TNC-210ENST00000535648 B4GALNT3Q6L9W6 998 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms