RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
ATM-224ENST00000534625 ASTLQ6HA08 431 aaPredicted RBP12.35□□□□□ -0.43
ATM-224ENST00000534625 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
ATM-224ENST00000534625 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
ATM-224ENST00000534625 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
ATM-224ENST00000534625 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
ATM-224ENST00000534625 C7P10643 843 aa12.28□□□□□ -0.44
ATM-224ENST00000534625 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
ATM-224ENST00000534625 POTEMA6NI47 508 aa12.26□□□□□ -0.45
ATM-224ENST00000534625 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
ATM-224ENST00000534625 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
ATM-224ENST00000534625 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
ATM-224ENST00000534625 MIER1Q8N108 512 aa12.2□□□□□ -0.46
ATM-224ENST00000534625 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
ATM-224ENST00000534625 MAP3K13O43283 966 aa12.17□□□□□ -0.46
ATM-224ENST00000534625 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
ATM-224ENST00000534625 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
ATM-224ENST00000534625 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
ATM-224ENST00000534625 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
ATM-224ENST00000534625 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
ATM-224ENST00000534625 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
ATM-224ENST00000534625 TIE1P35590 1138 aa12.08□□□□□ -0.48
ATM-224ENST00000534625 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
ATM-224ENST00000534625 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
ATM-224ENST00000534625 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
ATM-224ENST00000534625 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
ATM-224ENST00000534625 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
ATM-224ENST00000534625 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
ATM-224ENST00000534625 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
ATM-224ENST00000534625 SEC24BO95487 1268 aa12□□□□□ -0.49
ATM-224ENST00000534625 NUBP1P53384 320 aa11.98□□□□□ -0.49
ATM-224ENST00000534625 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
ATM-224ENST00000534625 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
ATM-224ENST00000534625 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.49
ATM-224ENST00000534625 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
ATM-224ENST00000534625 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
ATM-224ENST00000534625 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
ATM-224ENST00000534625 IER5LQ5T953 404 aa11.91□□□□□ -0.5
ATM-224ENST00000534625 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
ATM-224ENST00000534625 FAM212AQ96EL1 285 aa11.86□□□□□ -0.51
ATM-224ENST00000534625 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
ATM-224ENST00000534625 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
ATM-224ENST00000534625 PLCG2P16885 1265 aa11.79□□□□□ -0.52
ATM-224ENST00000534625 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
ATM-224ENST00000534625 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
ATM-224ENST00000534625 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
ATM-224ENST00000534625 PYGBP11216 843 aa11.77□□□□□ -0.53
ATM-224ENST00000534625 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
ATM-224ENST00000534625 ST18O60284 1047 aa11.76□□□□□ -0.53
ATM-224ENST00000534625 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
ATM-224ENST00000534625 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
ATM-224ENST00000534625 SPOCK2Q92563 424 aa11.67□□□□□ -0.54
ATM-224ENST00000534625 GSE1Q14687 1217 aa11.64□□□□□ -0.55
ATM-224ENST00000534625 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
ATM-224ENST00000534625 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
ATM-224ENST00000534625 SNPHO15079 494 aa11.56□□□□□ -0.56
ATM-224ENST00000534625 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
ATM-224ENST00000534625 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
ATM-224ENST00000534625 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
ATM-224ENST00000534625 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
ATM-224ENST00000534625 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
ATM-224ENST00000534625 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
ATM-224ENST00000534625 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
ATM-224ENST00000534625 SPNS2Q8IVW8 549 aa11.51□□□□□ -0.57
ATM-224ENST00000534625 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
ATM-224ENST00000534625 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
ATM-224ENST00000534625 ABCC9O60706 1549 aa11.49□□□□□ -0.57
ATM-224ENST00000534625 PSEN1P49768 467 aa11.48□□□□□ -0.57
ATM-224ENST00000534625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.573e-7■■■■□ 23.4
ATM-224ENST00000534625 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
ATM-224ENST00000534625 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
ATM-224ENST00000534625 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
ATM-224ENST00000534625 EMP3P54852 163 aa11.4□□□□□ -0.58
ATM-224ENST00000534625 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
ATM-224ENST00000534625 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
ATM-224ENST00000534625 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
ATM-224ENST00000534625 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
ATM-224ENST00000534625 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
ATM-224ENST00000534625 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
ATM-224ENST00000534625 RNF25Q96BH1 459 aaPredicted RBP11.35□□□□□ -0.59
ATM-224ENST00000534625 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
ATM-224ENST00000534625 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
ATM-224ENST00000534625 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
ATM-224ENST00000534625 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
ATM-224ENST00000534625 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
ATM-224ENST00000534625 G3V3G9 751 aa11.28□□□□□ -0.6
ATM-224ENST00000534625 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
ATM-224ENST00000534625 RIOK3O14730 519 aaKnown RBP11.26□□□□□ -0.61
ATM-224ENST00000534625 PKD2Q13563 968 aa11.26□□□□□ -0.61
ATM-224ENST00000534625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
ATM-224ENST00000534625 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
ATM-224ENST00000534625 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
ATM-224ENST00000534625 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
ATM-224ENST00000534625 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
ATM-224ENST00000534625 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
ATM-224ENST00000534625 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
ATM-224ENST00000534625 RGL2O15211 777 aa11.16□□□□□ -0.62
ATM-224ENST00000534625 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
ATM-224ENST00000534625 ERBB3P21860 1342 aa11.15□□□□□ -0.62
ATM-224ENST00000534625 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms