RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.93
CTNND1-236ENST00000533667 BECN1Q14457 450 aa9.26□□□□□ -0.93
CTNND1-236ENST00000533667 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-236ENST00000533667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.931e-8■■□□□ 13.5
CTNND1-236ENST00000533667 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-236ENST00000533667 TNIKQ9UKE5 1360 aa9.25□□□□□ -0.93
CTNND1-236ENST00000533667 RB1CC1Q8TDY2 1594 aa9.25□□□□□ -0.93
CTNND1-236ENST00000533667 CDCA8Q53HL2 280 aa9.25□□□□□ -0.93
CTNND1-236ENST00000533667 KDM2AQ9Y2K7 1162 aa9.24□□□□□ -0.93
CTNND1-236ENST00000533667 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
CTNND1-236ENST00000533667 NBR1Q14596 966 aa9.23□□□□□ -0.93
CTNND1-236ENST00000533667 CHMP7Q8WUX9 453 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-236ENST00000533667 WRNQ14191 1432 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CTNND1-236ENST00000533667 KIF27Q86VH2 1401 aa9.21□□□□□ -0.94
CTNND1-236ENST00000533667 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
CTNND1-236ENST00000533667 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
CTNND1-236ENST00000533667 CFAP53Q96M91 514 aa9.2□□□□□ -0.94
CTNND1-236ENST00000533667 RRP7BPQ9NSQ0 103 aa9.19□□□□□ -0.94
CTNND1-236ENST00000533667 ERICH6BQ5W0A0 696 aa9.19□□□□□ -0.94
CTNND1-236ENST00000533667 NACADO15069 1562 aa9.18□□□□□ -0.94
CTNND1-236ENST00000533667 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-236ENST00000533667 TIMELESSQ9UNS1 1208 aa9.18□□□□□ -0.94
CTNND1-236ENST00000533667 MYO15BQ96JP2 1530 aa9.17□□□□□ -0.94
CTNND1-236ENST00000533667 IRX6P78412 446 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-236ENST00000533667 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-236ENST00000533667 KNSTRNQ9Y448 316 aa9.16□□□□□ -0.94
CTNND1-236ENST00000533667 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
CTNND1-236ENST00000533667 PODXL2Q9NZ53 605 aa9.15□□□□□ -0.94
CTNND1-236ENST00000533667 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.94
CTNND1-236ENST00000533667 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-236ENST00000533667 CHMP4BQ9H444 224 aaKnown RBP9.15□□□□□ -0.95
CTNND1-236ENST00000533667 CDK11BP21127 795 aaKnown RBP9.14□□□□□ -0.95
CTNND1-236ENST00000533667 CASC1Q6TDU7 716 aa9.14□□□□□ -0.95
CTNND1-236ENST00000533667 CFDP1Q9UEE9 299 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-236ENST00000533667 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
CTNND1-236ENST00000533667 CARD11Q9BXL7 1154 aa9.13□□□□□ -0.95
CTNND1-236ENST00000533667 MS4A1P11836 297 aa9.13□□□□□ -0.95
CTNND1-236ENST00000533667 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-236ENST00000533667 SUPT16HQ9Y5B9 1047 aaKnown RBP9.11□□□□□ -0.95
CTNND1-236ENST00000533667 BAZ1AQ9NRL2 1556 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-236ENST00000533667 ARXQ96QS3 562 aa9.11□□□□□ -0.95
CTNND1-236ENST00000533667 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
CTNND1-236ENST00000533667 FTSJ3Q8IY81 847 aaKnown RBP9.1□□□□□ -0.95
CTNND1-236ENST00000533667 CCNB3Q8WWL7 1395 aa9.09□□□□□ -0.95
CTNND1-236ENST00000533667 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
CTNND1-236ENST00000533667 RGL3Q3MIN7 710 aa9.09□□□□□ -0.96
CTNND1-236ENST00000533667 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.96
CTNND1-236ENST00000533667 PNNQ9H307 717 aaKnown RBP9.08□□□□□ -0.96
CTNND1-236ENST00000533667 ZRSR1Q15695 479 aaKnown RBP9.06□□□□□ -0.96
CTNND1-236ENST00000533667 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
CTNND1-236ENST00000533667 NOP58Q9Y2X3 529 aaKnown RBP9.06□□□□□ -0.96
CTNND1-236ENST00000533667 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
CTNND1-236ENST00000533667 PLPPR3Q6T4P5 718 aa9.05□□□□□ -0.96
CTNND1-236ENST00000533667 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
CTNND1-236ENST00000533667 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
CTNND1-236ENST00000533667 TMF1P82094 1093 aa9.04□□□□□ -0.96
CTNND1-236ENST00000533667 SIN3AQ96ST3 1273 aa9.03□□□□□ -0.96
CTNND1-236ENST00000533667 VPS8Q8N3P4 1428 aa9.02□□□□□ -0.97
CTNND1-236ENST00000533667 SETD5Q9C0A6 1442 aa9.02□□□□□ -0.97
CTNND1-236ENST00000533667 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
CTNND1-236ENST00000533667 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-236ENST00000533667 KANK1Q14678 1352 aa9.01□□□□□ -0.97
CTNND1-236ENST00000533667 CARMIL1Q5VZK9 1371 aa9.01□□□□□ -0.97
CTNND1-236ENST00000533667 POGKQ9P215 609 aa9□□□□□ -0.97
CTNND1-236ENST00000533667 ARHGAP35Q9NRY4 1499 aa8.99□□□□□ -0.97
CTNND1-236ENST00000533667 GOLGA6L6A8MZA4 724 aa8.99□□□□□ -0.97
CTNND1-236ENST00000533667 PTMSP20962 102 aa8.99□□□□□ -0.97
CTNND1-236ENST00000533667 RGS3P49796 1198 aa8.99□□□□□ -0.97
CTNND1-236ENST00000533667 DNTTIP2Q5QJE6 756 aaKnown RBP8.99□□□□□ -0.97
CTNND1-236ENST00000533667 HSP90AB1P08238 724 aaKnown RBP8.99□□□□□ -0.97
CTNND1-236ENST00000533667 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
CTNND1-236ENST00000533667 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
CTNND1-236ENST00000533667 FRAT1Q92837 279 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-236ENST00000533667 NRDCO43847 1150 aa8.98□□□□□ -0.97
CTNND1-236ENST00000533667 NEUROD2Q15784 382 aa8.98□□□□□ -0.97
CTNND1-236ENST00000533667 HSCBQ8IWL3 235 aa8.97□□□□□ -0.97
CTNND1-236ENST00000533667 DEKP35659 375 aaKnown RBP8.97□□□□□ -0.97
CTNND1-236ENST00000533667 CUX2O14529 1486 aa8.97□□□□□ -0.97
CTNND1-236ENST00000533667 CC2D1BQ5T0F9 858 aaKnown RBP8.96□□□□□ -0.97
CTNND1-236ENST00000533667 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.97
CTNND1-236ENST00000533667 ARID4BQ4LE39 1312 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-236ENST00000533667 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.97
CTNND1-236ENST00000533667 DCAF11Q8TEB1 546 aa8.96□□□□□ -0.98
CTNND1-236ENST00000533667 KTN1Q86UP2 1357 aaKnown RBP8.96□□□□□ -0.98
CTNND1-236ENST00000533667 B4GALNT3Q6L9W6 998 aa8.95□□□□□ -0.98
CTNND1-236ENST00000533667 MCCP23508 829 aa8.95□□□□□ -0.98
CTNND1-236ENST00000533667 RALBP1Q15311 655 aa8.95□□□□□ -0.98
CTNND1-236ENST00000533667 NAP1L5Q96NT1 182 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-236ENST00000533667 SOGA1O94964 1423 aa8.94□□□□□ -0.98
CTNND1-236ENST00000533667 U2SURPO15042 1029 aaKnown RBP8.94□□□□□ -0.98
CTNND1-236ENST00000533667 HSPA5P11021 654 aaKnown RBP8.94□□□□□ -0.98
CTNND1-236ENST00000533667 A0A0G2JS52 829 aa8.94□□□□□ -0.98
CTNND1-236ENST00000533667 FMN1Q68DA7 1419 aa8.94□□□□□ -0.98
CTNND1-236ENST00000533667 IPO8O15397 1037 aaKnown RBP8.93□□□□□ -0.98
CTNND1-236ENST00000533667 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
CTNND1-236ENST00000533667 OS9Q13438 667 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-236ENST00000533667 MORC1Q86VD1 984 aa8.93□□□□□ -0.98
CTNND1-236ENST00000533667 CALD1Q05682 793 aaKnown RBP8.92□□□□□ -0.98
CTNND1-236ENST00000533667 TCERG1O14776 1098 aaKnown RBP8.92□□□□□ -0.98
CTNND1-236ENST00000533667 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms