RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
CCT3-216ENST00000533194 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
CCT3-216ENST00000533194 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
CCT3-216ENST00000533194 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
CCT3-216ENST00000533194 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
CCT3-216ENST00000533194 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
CCT3-216ENST00000533194 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
CCT3-216ENST00000533194 IGF1RP08069 1367 aa12.59□□□□□ -0.39
CCT3-216ENST00000533194 PTPRGP23470 1445 aa12.58□□□□□ -0.4
CCT3-216ENST00000533194 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
CCT3-216ENST00000533194 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
CCT3-216ENST00000533194 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
CCT3-216ENST00000533194 CUL7Q14999 1698 aa12.56□□□□□ -0.4
CCT3-216ENST00000533194 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
CCT3-216ENST00000533194 KDM6BO15054 1643 aa12.54□□□□□ -0.4
CCT3-216ENST00000533194 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
CCT3-216ENST00000533194 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
CCT3-216ENST00000533194 ABCC2Q92887 1545 aa12.49□□□□□ -0.41
CCT3-216ENST00000533194 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
CCT3-216ENST00000533194 ASXL2Q76L83 1435 aa12.47□□□□□ -0.41
CCT3-216ENST00000533194 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
CCT3-216ENST00000533194 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
CCT3-216ENST00000533194 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
CCT3-216ENST00000533194 UHRF1BP1LA0JNW5 1464 aa12.43□□□□□ -0.42
CCT3-216ENST00000533194 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
CCT3-216ENST00000533194 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
CCT3-216ENST00000533194 TSPOAP1O95153 1857 aa12.4□□□□□ -0.42
CCT3-216ENST00000533194 GLI2P10070 1586 aa12.4□□□□□ -0.42
CCT3-216ENST00000533194 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
CCT3-216ENST00000533194 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
CCT3-216ENST00000533194 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
CCT3-216ENST00000533194 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
CCT3-216ENST00000533194 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
CCT3-216ENST00000533194 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
CCT3-216ENST00000533194 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
CCT3-216ENST00000533194 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
CCT3-216ENST00000533194 KIAA0556O60303 1618 aa12.33□□□□□ -0.44
CCT3-216ENST00000533194 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
CCT3-216ENST00000533194 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
CCT3-216ENST00000533194 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
CCT3-216ENST00000533194 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
CCT3-216ENST00000533194 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
CCT3-216ENST00000533194 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CCT3-216ENST00000533194 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
CCT3-216ENST00000533194 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
CCT3-216ENST00000533194 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
CCT3-216ENST00000533194 ABCA8O94911 1581 aa12.21□□□□□ -0.46
CCT3-216ENST00000533194 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
CCT3-216ENST00000533194 CTTNBP2Q8WZ74 1663 aa12.2□□□□□ -0.46
CCT3-216ENST00000533194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
CCT3-216ENST00000533194 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
CCT3-216ENST00000533194 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CCT3-216ENST00000533194 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
CCT3-216ENST00000533194 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
CCT3-216ENST00000533194 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
CCT3-216ENST00000533194 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
CCT3-216ENST00000533194 ARAP3Q8WWN8 1544 aa12.14□□□□□ -0.47
CCT3-216ENST00000533194 ATP10BO94823 1461 aa12.14□□□□□ -0.47
CCT3-216ENST00000533194 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
CCT3-216ENST00000533194 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
CCT3-216ENST00000533194 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
CCT3-216ENST00000533194 NEO1Q92859 1461 aa12.1□□□□□ -0.47
CCT3-216ENST00000533194 KIF21BO75037 1637 aa12.1□□□□□ -0.47
CCT3-216ENST00000533194 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
CCT3-216ENST00000533194 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
CCT3-216ENST00000533194 EEA1Q15075 1411 aa12.07□□□□□ -0.48
CCT3-216ENST00000533194 PTPRMP28827 1452 aa12.07□□□□□ -0.48
CCT3-216ENST00000533194 FBXO41Q8TF61 875 aa12.06□□□□□ -0.48
CCT3-216ENST00000533194 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
CCT3-216ENST00000533194 SAMD9Q5K651 1589 aa12.05□□□□□ -0.48
CCT3-216ENST00000533194 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
CCT3-216ENST00000533194 DENND4BO75064 1496 aaPredicted RBP12.04□□□□□ -0.48
CCT3-216ENST00000533194 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
CCT3-216ENST00000533194 NUP153P49790 1475 aaKnown RBP12.03□□□□□ -0.48
CCT3-216ENST00000533194 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
CCT3-216ENST00000533194 FANCAO15360 1455 aa12.01□□□□□ -0.49
CCT3-216ENST00000533194 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
CCT3-216ENST00000533194 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
CCT3-216ENST00000533194 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
CCT3-216ENST00000533194 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
CCT3-216ENST00000533194 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
CCT3-216ENST00000533194 PCF11O94913 1555 aaKnown RBP11.98□□□□□ -0.49
CCT3-216ENST00000533194 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
CCT3-216ENST00000533194 FRMPD1Q5SYB0 1578 aa11.97□□□□□ -0.49
CCT3-216ENST00000533194 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
CCT3-216ENST00000533194 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CCT3-216ENST00000533194 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CCT3-216ENST00000533194 MAGI2Q86UL8 1455 aa11.95□□□□□ -0.5
CCT3-216ENST00000533194 MLECQ14165 292 aa11.95□□□□□ -0.5
CCT3-216ENST00000533194 ZFYVE16Q7Z3T8 1539 aa11.95□□□□□ -0.5
CCT3-216ENST00000533194 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
CCT3-216ENST00000533194 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
CCT3-216ENST00000533194 MYT1LQ9UL68 1186 aa11.94□□□□□ -0.5
CCT3-216ENST00000533194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCT3-216ENST00000533194 EFCAB2Q5VUJ9 269 aa11.93□□□□□ -0.5
CCT3-216ENST00000533194 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
CCT3-216ENST00000533194 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
CCT3-216ENST00000533194 HSPA2P54652 639 aa11.92□□□□□ -0.5
CCT3-216ENST00000533194 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
CCT3-216ENST00000533194 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms