RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 A0A0G2JS52 829 aa15.43■□□□□ 0.06
PTPRK-221ENST00000532331 SOGA1O94964 1423 aa15.43■□□□□ 0.06
PTPRK-221ENST00000532331 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
PTPRK-221ENST00000532331 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
PTPRK-221ENST00000532331 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
PTPRK-221ENST00000532331 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
PTPRK-221ENST00000532331 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
PTPRK-221ENST00000532331 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
PTPRK-221ENST00000532331 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
PTPRK-221ENST00000532331 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
PTPRK-221ENST00000532331 MLECQ14165 292 aa15.4■□□□□ 0.06
PTPRK-221ENST00000532331 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
PTPRK-221ENST00000532331 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
PTPRK-221ENST00000532331 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
PTPRK-221ENST00000532331 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
PTPRK-221ENST00000532331 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
PTPRK-221ENST00000532331 CCNB3Q8WWL7 1395 aa15.35■□□□□ 0.05
PTPRK-221ENST00000532331 CEP162Q5TB80 1403 aa15.33■□□□□ 0.05
PTPRK-221ENST00000532331 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
PTPRK-221ENST00000532331 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
PTPRK-221ENST00000532331 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
PTPRK-221ENST00000532331 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
PTPRK-221ENST00000532331 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
PTPRK-221ENST00000532331 KANK1Q14678 1352 aa15.28■□□□□ 0.04
PTPRK-221ENST00000532331 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
PTPRK-221ENST00000532331 TNIKQ9UKE5 1360 aa15.27■□□□□ 0.03
PTPRK-221ENST00000532331 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
PTPRK-221ENST00000532331 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
PTPRK-221ENST00000532331 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
PTPRK-221ENST00000532331 POGKQ9P215 609 aa15.22■□□□□ 0.03
PTPRK-221ENST00000532331 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
PTPRK-221ENST00000532331 GGT6Q6P531 493 aa15.22■□□□□ 0.03
PTPRK-221ENST00000532331 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.02
PTPRK-221ENST00000532331 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
PTPRK-221ENST00000532331 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
PTPRK-221ENST00000532331 WIZO95785 1651 aa15.17■□□□□ 0.02
PTPRK-221ENST00000532331 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
PTPRK-221ENST00000532331 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
PTPRK-221ENST00000532331 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
PTPRK-221ENST00000532331 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
PTPRK-221ENST00000532331 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
PTPRK-221ENST00000532331 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPRK-221ENST00000532331 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
PTPRK-221ENST00000532331 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRK-221ENST00000532331 FAM9BQ8IZU0 186 aa15.11■□□□□ 0.01
PTPRK-221ENST00000532331 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-221ENST00000532331 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-221ENST00000532331 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
PTPRK-221ENST00000532331 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
PTPRK-221ENST00000532331 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
PTPRK-221ENST00000532331 CFAP53Q96M91 514 aa15.07■□□□□ 0
PTPRK-221ENST00000532331 FKBP8Q14318 412 aa15.05■□□□□ -0
PTPRK-221ENST00000532331 ARXQ96QS3 562 aa15.05■□□□□ -0
PTPRK-221ENST00000532331 RAPGEF2Q9Y4G8 1499 aa15.05■□□□□ -0
PTPRK-221ENST00000532331 KNSTRNQ9Y448 316 aa15.04■□□□□ -0
PTPRK-221ENST00000532331 PTPRGP23470 1445 aa15.02■□□□□ -0
PTPRK-221ENST00000532331 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-221ENST00000532331 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
PTPRK-221ENST00000532331 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-221ENST00000532331 KIF3BO15066 747 aa15□□□□□ -0.01
PTPRK-221ENST00000532331 EID1Q9Y6B2 187 aa15□□□□□ -0.01
PTPRK-221ENST00000532331 MRS2Q9HD23 443 aa15□□□□□ -0.01
PTPRK-221ENST00000532331 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
PTPRK-221ENST00000532331 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
PTPRK-221ENST00000532331 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
PTPRK-221ENST00000532331 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
PTPRK-221ENST00000532331 HSP90AA1P07900 732 aaKnown RBP14.97□□□□□ -0.01
PTPRK-221ENST00000532331 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
PTPRK-221ENST00000532331 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
PTPRK-221ENST00000532331 HNRNPMP52272 730 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■■□□ 18
PTPRK-221ENST00000532331 NPHP1O15259 732 aa14.96□□□□□ -0.01
PTPRK-221ENST00000532331 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.01
PTPRK-221ENST00000532331 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
PTPRK-221ENST00000532331 STK26Q9P289 416 aa14.95□□□□□ -0.02
PTPRK-221ENST00000532331 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPRK-221ENST00000532331 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
PTPRK-221ENST00000532331 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
PTPRK-221ENST00000532331 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
PTPRK-221ENST00000532331 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
PTPRK-221ENST00000532331 MYH16Q9H6N6 1097 aa14.92□□□□□ -0.02
PTPRK-221ENST00000532331 CCDC136Q96JN2 1154 aa14.92□□□□□ -0.02
PTPRK-221ENST00000532331 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
PTPRK-221ENST00000532331 PKD2Q13563 968 aa14.92□□□□□ -0.02
PTPRK-221ENST00000532331 SOX12O15370 315 aa14.91□□□□□ -0.02
PTPRK-221ENST00000532331 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
PTPRK-221ENST00000532331 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
PTPRK-221ENST00000532331 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
PTPRK-221ENST00000532331 TMF1P82094 1093 aa14.89□□□□□ -0.03
PTPRK-221ENST00000532331 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
PTPRK-221ENST00000532331 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
PTPRK-221ENST00000532331 NUP155O75694 1391 aa14.89□□□□□ -0.03
PTPRK-221ENST00000532331 TNNT2P45379 298 aaPredicted RBP14.88□□□□□ -0.03
PTPRK-221ENST00000532331 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
PTPRK-221ENST00000532331 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
PTPRK-221ENST00000532331 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.039e-8■■■■■ 30.5
PTPRK-221ENST00000532331 SIN3AQ96ST3 1273 aa14.86□□□□□ -0.03
PTPRK-221ENST00000532331 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
PTPRK-221ENST00000532331 HDGFL2Q7Z4V5 671 aaPredicted RBP14.84□□□□□ -0.03
PTPRK-221ENST00000532331 KANK4Q5T7N3 995 aaPredicted RBP14.84□□□□□ -0.03
PTPRK-221ENST00000532331 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms